Gene

KWMTBOMO10473

Pre Gene Modal

BGIBMGA007104

Annotation

PREDICTED:_heparan_sulfate_glucosamine_3-O-sulfotransferase_3B1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr17(+):11996037-12000635      View in EpiBrowser

Full name

Sulfotransferase      

Location in the cell

Mitochondrial   Reliability : 3.554

CDS

ATGTTCCTATTATATTTGTTTTATACGATAAATTTTTGTGTAGTTGACAAACAGCCCACGCTGAAAACGATTTTGAAAAGCCACATATCAAAGTACAAGAGCGGAGCGTTCCGTTTCGCTTCGTTCCTAGGATTTGACGTTGAAGACTACAAGTATACGAGATTGAGCCGTAACGCTGGGCCCGTAAGGAGGCTCCCAGACGCTCTCATTATTGGAGTCAAGAAGTGTGGTACGCGAGCGCTCTTGGAATTCTTAAGGTTGCATCCGGACGTCCGAGCTGCGGTCTCCGAAATCCATTTCTTCGATAAATATTATCACAAAGGATTCGAGTGGTACAGAGAACGGATGCCCTTAACATTGGAGGGTCAGATTACAATGGAGAAGACTCCGTCATATTGGGTGACGAAGTCGGCACCAAAACGGGTTTATGCCATGAATCCTTCAGTGAAACTCTTGGCTGTGGTCCGAGATCCGGTCACTAGAGCTATAAGCGATTACACGCAGTCGGCAAGTAAGCGACCCTCGCTGGCGCCATTCGAGCAGCTAGCTCTGAGTAACAGGTCAGGTTGCAGCGCAGTGGACCCGACGTGGGCTCCAGTGCGGCTGGGAGTGTACGCCCGACCGCTGCGCCGCTGGTTGCGAAGGTTCCGAAGAGATAGGCTCCTGCTTGTGAACGGGGAGAGGCTCGTTGCCGATCCCGCTGCTGAAATGGCGAAAGTACAGGACTTCCTCGGCCTCAAGCGCGTGATAACAGAGAAACACTTCTATTTTAATTCAGCGAAAGGCTTCCCTTGCCTGCTGAAGTCGGAAAGCAGTTCGAGCCCACACTGCCTGGGCAAAACTAAAGGAAGGAATCATCCGCGAATCGACCCGGCCGCTTTGAAGAGACTCCGCGAGTTTTATCGACCATTAAATGAGATTTTTTATCGATTATCCGGCATTAACTTTGGGTGGCCTTGA

Protein

MFLLYLFYTINFCVVDKQPTLKTILKSHISKYKSGAFRFASFLGFDVEDYKYTRLSRNAGPVRRLPDALIIGVKKCGTRALLEFLRLHPDVRAAVSEIHFFDKYYHKGFEWYRERMPLTLEGQITMEKTPSYWVTKSAPKRVYAMNPSVKLLAVVRDPVTRAISDYTQSASKRPSLAPFEQLALSNRSGCSAVDPTWAPVRLGVYARPLRRWLRRFRRDRLLLVNGERLVADPAAEMAKVQDFLGLKRVITEKHFYFNSAKGFPCLLKSESSSSPHCLGKTKGRNHPRIDPAALKRLREFYRPLNEIFYRLSGINFGWP

Similarity

Belongs to the sulfotransferase 1 family.

Feature

chain  Sulfotransferase

Uniprot

H9JC59   A0A2A4IV28   A0A2H1VJW6   A0A194PK31   A0A194QZ13   A0A212ETZ4   + More
T1I9R4   A0A1Y1KEL5   A0A0A9XTT8   A0A0V0GEI3   A0A1B6CZ72   A0A2J7PXH1   A0A1Y1KE09   A0A084WFT2   A0A182GDX9   A0A182RKS1   A0A182SXA2   A0A182W5U9   A0A182IRI0   A0A182QDD2   Q16JX3   A0A067R0D2   A0A182YCR8   A0A182PBL2   A0A182K9T7   Q16UV9   A0A182M4R1   B0WN53   A0A2M4BRG8   A0A182N0M0   B3N134   Q9VWJ7   B4I734   B4PZV0   A0A182WW76   A0A182UG66   A0A182IAT2   Q7PS29   A0A1W4XA70   B4MCU9   A0A1W4V1H2   A0A0T6AU35   A0A182FJ75   A0A182V7B7   A0A1B6JKW8   A0A1B0D1N1   B3NVM0   B4GVD2   A0A0Q9WZY7   B4L4D3   B4N1P5   D6WWF7   A0A1B6H004   A0A224XT25   A0A2R7VY63   B4JN09   A0A1B0FDZ5   A0A0M5J1J3   A0A1A9UHM1   A0A1A9ZJV6   Q29GN9   A0A3B0KPX6   A0A0L0C8Q9   A0A1B6DBD5   A0A336KWE1   A0A1I8NB35   A0A1I8PYM3   A0A2P8YJZ8   K7IXV0   V5GZH0   A0A0P4VFV0   U4UGD8   E2A219   A0A0J7L3C2   A0A026W635   A0A195F960   A0A0M8ZQA6   A0A1B0CD03   A0A195BWN3   E2BS56   A0A158NCP8   E9ILM6   A0A195CG47   A0A2D0SB63   W5UEB2   A0A3B1JME9   A0A0L7R2Y3   T1GT44   A0A088A7B3   A0A195EN01   A0A3B4DR47   A0A154PPJ8   A0A3B3SLR7   A0A3B3ZG05   W5LS27   A0A1A9XIB6   A0A3B3RFS3   A0A1B0ARV4   A0A3B3ZG51   A0A3Q3JWE8  

EC Number

2.8.2.-

Pubmed

19121390    26354079    22118469    28004739    25401762    26823975    + More
24438588    26483478    17510324    24845553    25244985    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    12364791    14747013    17210077    18362917    19820115    15632085    23185243    26108605    25315136    29403074    20075255    27129103    23537049    20798317    24508170    21347285    21282665    23127152    25329095    29240929    25463417   

EMBL

BABH01014933    NWSH01006781    PCG63238.1    ODYU01002794    SOQ40732.1    KQ459603    + More
KPI93084.1    KQ461137    KPJ08836.1    AGBW02012517    OWR44949.1    ACPB03022631    GEZM01088874    JAV57856.1    GBHO01021351    GDHC01010707    JAG22253.1    JAQ07922.1    GECL01000381    JAP05743.1    GEDC01018633    JAS18665.1    NEVH01020858    PNF21020.1    GEZM01088875    JAV57855.1    ATLV01023392    KE525342    KFB49076.1    JXUM01056698    JXUM01056699    KQ561921    KXJ77154.1    AXCN02002146    CH477988    EAT34586.1    KK853134    KDR10866.1    CH477613    EAT38321.1    AXCM01017730    DS232007    EDS31484.1    GGFJ01006471    MBW55612.1    CH902650    EDV30069.1    AE014298    AY119100    AAF48941.1    AAM50960.1    AGB95542.1    CH480823    EDW56132.1    CM000162    EDX02156.2    APCN01001319    AAAB01008846    EAA06261.5    CH940660    EDW58021.1    LJIG01022809    KRT78604.1    GECU01007785    JAS99921.1    AJVK01022225    CH954180    EDV46685.2    CH479192    EDW26419.1    CH933810    KRF94037.1    EDW07411.1    CH963925    EDW78284.1    KQ971361    EFA08142.1    GECZ01001791    JAS67978.1    GFTR01005307    JAW11119.1    KK854120    PTY11620.1    CH916371    EDV92102.1    CCAG010007395    CP012528    ALC50018.1    CH379064    EAL32070.2    KRT06841.1    OUUW01000015    SPP88669.1    JRES01000755    KNC28635.1    GEDC01014346    JAS22952.1    UFQS01001086    UFQT01001086    SSX08918.1    SSX28829.1    PYGN01000541    PSN44568.1    GALX01001139    JAB67327.1    GDKW01003647    JAI52948.1    KB632283    ERL91403.1    GL435917    EFN72503.1    LBMM01001102    KMQ96924.1    KK107389    EZA51468.1    KQ981727    KYN36916.1    KQ435918    KOX68737.1    AJWK01007284    KQ976396    KYM93044.1    GL450151    EFN81448.1    ADTU01012006    GL764129    EFZ18359.1    KQ977791    KYM99724.1    JT413652    AHH40336.1    KQ414664    KOC65189.1    CAQQ02121946    CAQQ02121947    KQ978691    KYN29264.1    KQ435012    KZC13811.1    JXJN01002588   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000015103    + More
UP000235965    UP000030765    UP000069940    UP000249989    UP000075900    UP000075901    UP000075920    UP000075880    UP000075886    UP000008820    UP000027135    UP000076408    UP000075885    UP000075881    UP000075883    UP000002320    UP000075884    UP000007801    UP000000803    UP000001292    UP000002282    UP000076407    UP000075902    UP000075840    UP000007062    UP000192223    UP000008792    UP000192221    UP000069272    UP000075903    UP000092462    UP000008711    UP000008744    UP000009192    UP000007798    UP000007266    UP000001070    UP000092444    UP000092553    UP000078200    UP000092445    UP000001819    UP000268350    UP000037069    UP000095301    UP000095300    UP000245037    UP000002358    UP000030742    UP000000311    UP000036403    UP000053097    UP000078541    UP000053105    UP000092461    UP000078540    UP000008237    UP000005205    UP000078542    UP000221080    UP000018467    UP000053825    UP000015102    UP000005203    UP000078492    UP000261440    UP000076502    UP000261540    UP000261520    UP000092443    UP000092460    UP000261600   

PRIDE

H9JC59    Q9VWJ7   

Pfam

PF00685   Sulfotransfer_1        + More
PF14664   RICTOR_N
PF14663   RasGEF_N_2
PF14668   RICTOR_V
PF14666   RICTOR_M

Interpro

IPR027417   P-loop_NTPase        + More
IPR000863   Sulfotransferase_dom       
IPR037359   NST/OST       
IPR016024   ARM-type_fold       
IPR029451   RICTOR_M       
IPR028267   Pianissimo_N       
IPR029452   RICTOR_V       
IPR028268   Pianissimo_fam       
IPR029453   Rictor_IV       

SUPFAM

SSF52540   SSF52540        + More
SSF48371   SSF48371       

ProteinModelPortal

H9JC59   A0A2A4IV28   A0A2H1VJW6   A0A194PK31   A0A194QZ13   A0A212ETZ4   + More
T1I9R4   A0A1Y1KEL5   A0A0A9XTT8   A0A0V0GEI3   A0A1B6CZ72   A0A2J7PXH1   A0A1Y1KE09   A0A084WFT2   A0A182GDX9   A0A182RKS1   A0A182SXA2   A0A182W5U9   A0A182IRI0   A0A182QDD2   Q16JX3   A0A067R0D2   A0A182YCR8   A0A182PBL2   A0A182K9T7   Q16UV9   A0A182M4R1   B0WN53   A0A2M4BRG8   A0A182N0M0   B3N134   Q9VWJ7   B4I734   B4PZV0   A0A182WW76   A0A182UG66   A0A182IAT2   Q7PS29   A0A1W4XA70   B4MCU9   A0A1W4V1H2   A0A0T6AU35   A0A182FJ75   A0A182V7B7   A0A1B6JKW8   A0A1B0D1N1   B3NVM0   B4GVD2   A0A0Q9WZY7   B4L4D3   B4N1P5   D6WWF7   A0A1B6H004   A0A224XT25   A0A2R7VY63   B4JN09   A0A1B0FDZ5   A0A0M5J1J3   A0A1A9UHM1   A0A1A9ZJV6   Q29GN9   A0A3B0KPX6   A0A0L0C8Q9   A0A1B6DBD5   A0A336KWE1   A0A1I8NB35   A0A1I8PYM3   A0A2P8YJZ8   K7IXV0   V5GZH0   A0A0P4VFV0   U4UGD8   E2A219   A0A0J7L3C2   A0A026W635   A0A195F960   A0A0M8ZQA6   A0A1B0CD03   A0A195BWN3   E2BS56   A0A158NCP8   E9ILM6   A0A195CG47   A0A2D0SB63   W5UEB2   A0A3B1JME9   A0A0L7R2Y3   T1GT44   A0A088A7B3   A0A195EN01   A0A3B4DR47   A0A154PPJ8   A0A3B3SLR7   A0A3B3ZG05   W5LS27   A0A1A9XIB6   A0A3B3RFS3   A0A1B0ARV4   A0A3B3ZG51   A0A3Q3JWE8  

PDB

1T8U     E-value=1.15955e-90,     Score=849

KEGG

101745633    K07809 [heparan sulfate]-glucosamine 3-sulfotransferase 3 [EC:2.8.2.30] | (RefSeq) heparan sulfate g

PATHWAY

00534    Glycosaminoglycan biosynthesis - heparan sulfate / heparin - Bombyx mori (domestic silkworm)

GO

GO:0008146   GO:0016021   GO:0016348   GO:0001745   GO:0048190   GO:0050768   GO:0008407   GO:0008467   GO:0007032   GO:0007040   GO:0051036   GO:0008586   GO:0007474   GO:0008587   GO:0007476   GO:0015012   GO:0034483   GO:0031932   GO:0031929   GO:0016740   GO:0019243   GO:0008237   GO:0005245   GO:0005891   GO:0004674   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

PANTHER

PTHR10605   PTHR13298  

Length:

319

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00309

Exp number, first 60 AAs:

0.00251

Total prob of N-in:

0.00255

outside

1  -  319

 

 

Pi

20.416581

Theta

20.000304

Tajima's D

-1.288918

CLR

0.386896

CSRT

0.0874456277186141

Interpretation

Uncertain