Gene

KWMTBOMO10468

Pre Gene Modal

BGIBMGA007102

Annotation

PREDICTED:_uncharacterized_protein_LOC106118897_[Papilio_xuthus]

Location

Bomo_Chr17(+):11923637-11966792      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.761

CDS

ATGTTATGCGCTGCCATCATGACAGACCACTGGGAGCACGTGGCGTGGGACCGAGCCGCGCTGACCGCGCTAGCTAACACGTCGCACATACCGCTGCAGTGGCTGTTAGATGAAAAAGTTGTCAAAGTCGACGACCCGAATAACAGAAAAGGAATCGGGACCTTTTTGGTCCCTATGAACGGAGGTATCTGGACGATGTGCGTCTCTTTAGAAGAGGAGGAAGCCACGATTTTGTCAAGAGTTGGCTTCCCAAAGGAACCGGTCTGCACGAACTATTTGGCCGATAGCGACTACGAAGAGCCCCGGGCGGATTGGCAGCACCGTATGCAAAATCTATCGATATCTTGTGCGTTGGTCTGCCTGATAGTGCTGGGAAGCGCGGCGCTGGTGGGCGCTTTCGGAGTCTGCAAGCATCAGATCAGCGCCGTTCTTATAACCGGAGTTATGTATTTATTGGCCGGTCTCTTTGCAATGTTTACGTTAATGATAATCCACTTCAAACGCGTCCAGCGGGTCTCGTCCCGGGGTAGTTCTCATGGAGACGACACGGGAGATGGAGTAGTCGGTCCCAAGACTACAGTCATTCCTCTCCTTTCCGCAAGAGAATTCTCCACGTCGTGGTCCCTCGAACTCGGCTGGGGGGGAGTTGTACTAGCGACTACAACTTCACTACTGTGGATATTACTATCGAAAATAATGAGATACAATCCCATATCGACTATGCTGTTGTAA

Protein

MLCAAIMTDHWEHVAWDRAALTALANTSHIPLQWLLDEKVVKVDDPNNRKGIGTFLVPMNGGIWTMCVSLEEEEATILSRVGFPKEPVCTNYLADSDYEEPRADWQHRMQNLSISCALVCLIVLGSAALVGAFGVCKHQISAVLITGVMYLLAGLFAMFTLMIIHFKRVQRVSSRGSSHGDDTGDGVVGPKTTVIPLLSAREFSTSWSLELGWGGVVLATTTSLLWILLSKIMRYNPISTMLL

Uniprot

A0A194PPM3   A0A3S2LQA4   A0A212ETY3   A0A2H1VIW5   A0A194QTN8   D2A551   + More
A0A1Y1JUK8   U4U5J5   N6SU50   A0A1W4XLR7   A0A182IJG2   A0A084W354   A0A182HER6   W8B6V2   A0A182QH12   A0A182RPE8   A0A1I8PXM2   A0A1W4XKW3   A0A182PDZ7   A0A182M2F8   A0A182HTJ5   A0A182XIS1   A0A1S4FC82   A0A1J1IV45   A0A0M8ZZP9   A0A1W4W382   W8BLV4   A0A1I8N3L3   W8AZV0   A0A182VRU9   A0A310S6N0   A0A1I8PXK3   B4PTV5   A0A2A3EAZ1   A0A088AR78   B4KDB5   A0A1B6DGP9   A0A3B0JSP8   A0A0C9QMI6   A0A182XUX9   Q294J7   A0A2J7QGI5   A0A154P3A5   A0A3L8DIB7   A0A026WTL8   A0A1B0EU37   A0A151WRR7   A0A158NZF9   A0A182F724   A0A182N7B1   A0A0L7REW1   A0A195CSB8   A0A034WUH6   A0A151ISY0   E2AB20   A0A195FY61   E9J723   E2C4L9   A0A067QVU4   A0A182LBW6   A0A182UJB0   A0A0A9WR29   A0A0K8T9V2   A0A224XXA4   A0A0A9WFR9   A0A0K8T9W4   A0A336M2S7   A0A2S2QL02   J9LG32  

Pubmed

26354079    22118469    18362917    19820115    28004739    23537049    + More
24438588    26483478    24495485    17510324    25315136    17994087    17550304    25244985    15632085    30249741    24508170    21347285    25348373    20798317    21282665    24845553    20966253    25401762   

EMBL

KQ459603    KPI93080.1    RSAL01000031    RVE51621.1    AGBW02012517    OWR44953.1    + More
ODYU01002794    SOQ40736.1    KQ461137    KPJ08832.1    KQ971361    EFA05133.2    GEZM01100786    JAV52793.1    KB632155    ERL89174.1    APGK01056937    KB741277    ENN71219.1    ATLV01019817    KE525279    KFB44648.1    JXUM01005810    JXUM01005811    JXUM01005812    JXUM01005813    JXUM01005814    KQ560202    KXJ83869.1    GAMC01012198    JAB94357.1    AXCN02000146    AXCM01004826    CVRI01000057    CRL02409.1    KQ435791    KOX74400.1    GAMC01012199    JAB94356.1    GAMC01012200    JAB94355.1    KQ767621    OAD53384.1    CM000160    EDW96566.2    KZ288313    PBC28356.1    CH933806    EDW14897.2    GEDC01012435    JAS24863.1    OUUW01000008    SPP84033.1    GBYB01001837    GBYB01001838    JAG71604.1    JAG71605.1    CM000070    EAL28967.4    NEVH01014362    PNF27698.1    KQ434796    KZC05718.1    QOIP01000008    RLU19578.1    KK107109    EZA59357.1    CCAG010000815    KQ982807    KYQ50365.1    ADTU01004588    KQ414608    KOC69368.1    KQ977349    KYN03397.1    GAKP01000955    JAC57997.1    KQ981047    KYN10036.1    GL438234    EFN69296.1    KQ981169    KYN45378.1    GL768421    EFZ11374.1    GL452536    EFN77099.1    KK853186    KDR10065.1    GBHO01036299    JAG07305.1    GBRD01003493    JAG62328.1    GFTR01003795    JAW12631.1    GBHO01036302    JAG07302.1    GBRD01003492    JAG62329.1    UFQT01000375    SSX23701.1    GGMS01009017    MBY78220.1    ABLF02018459   

Proteomes

UP000053268    UP000283053    UP000007151    UP000053240    UP000007266    UP000030742    + More
UP000019118    UP000192223    UP000075880    UP000030765    UP000069940    UP000249989    UP000075886    UP000075900    UP000095300    UP000075885    UP000075883    UP000076407    UP000183832    UP000053105    UP000192221    UP000095301    UP000075920    UP000002282    UP000242457    UP000005203    UP000009192    UP000268350    UP000076408    UP000001819    UP000235965    UP000076502    UP000279307    UP000053097    UP000092444    UP000075809    UP000005205    UP000069272    UP000075884    UP000053825    UP000078542    UP000078492    UP000000311    UP000078541    UP000008237    UP000027135    UP000075882    UP000075902    UP000007819   

Pfam

PF13903   Claudin_2

Interpro

IPR004031   PMP22/EMP/MP20/Claudin       

ProteinModelPortal

A0A194PPM3   A0A3S2LQA4   A0A212ETY3   A0A2H1VIW5   A0A194QTN8   D2A551   + More
A0A1Y1JUK8   U4U5J5   N6SU50   A0A1W4XLR7   A0A182IJG2   A0A084W354   A0A182HER6   W8B6V2   A0A182QH12   A0A182RPE8   A0A1I8PXM2   A0A1W4XKW3   A0A182PDZ7   A0A182M2F8   A0A182HTJ5   A0A182XIS1   A0A1S4FC82   A0A1J1IV45   A0A0M8ZZP9   A0A1W4W382   W8BLV4   A0A1I8N3L3   W8AZV0   A0A182VRU9   A0A310S6N0   A0A1I8PXK3   B4PTV5   A0A2A3EAZ1   A0A088AR78   B4KDB5   A0A1B6DGP9   A0A3B0JSP8   A0A0C9QMI6   A0A182XUX9   Q294J7   A0A2J7QGI5   A0A154P3A5   A0A3L8DIB7   A0A026WTL8   A0A1B0EU37   A0A151WRR7   A0A158NZF9   A0A182F724   A0A182N7B1   A0A0L7REW1   A0A195CSB8   A0A034WUH6   A0A151ISY0   E2AB20   A0A195FY61   E9J723   E2C4L9   A0A067QVU4   A0A182LBW6   A0A182UJB0   A0A0A9WR29   A0A0K8T9V2   A0A224XXA4   A0A0A9WFR9   A0A0K8T9W4   A0A336M2S7   A0A2S2QL02   J9LG32  

KEGG

101745351    no KO assigned | (RefSeq) uncharacterized LOC101745351

GO

GO:0016021  

Length:

243

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

66.78578

Exp number, first 60 AAs:

0.19029

Total prob of N-in:

0.86276

inside

1  -  111

TMhelix

112  -  134

outside

135  -  143

TMhelix

144  -  166

inside

167  -  206

TMhelix

207  -  229

outside

230  -  243

 

 

Pi

181.831033

Theta

148.320149

Tajima's D

0.310254

CLR

1.172939

CSRT

0.458627068646568

Interpretation

Uncertain