Gene

KWMTBOMO10467  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007000

Annotation

Protein_HGV2_[Papilio_machaon]

Location

Bomo_Chr17(-):11908143-11919186      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.427

CDS

ATGGCTGATATGATTGAAGTATCAACAGCAACTCCGGCGGAGTTACTTGGTGCTGGTCGACGCCACTTGGCTGTTAGAGACTTTCATTCGGCTGCTGAAGTACTGGCCAAAGCTTGTGAACTGTTGGCTAAAGAACATGGTGACACGGCGGACCAGTGTGCTGAGGCATATTTATGGTATGGCCAAGCACTATTAGGTTTGTCCAGGGATGAAAGTGGAGTTTTGGGAGATGGTATGCCAGGATCAGGCAATGTTGATGATGACGATGAAGAACAAGATGATGATGACAACAATGACAATGAACAAACAGAACAAAGCTGCGAACCTGAAAAGAGTAAAACTGAACACAACGAGGCTGAATCTACTTCGATGGAGGCTGATACATCAACAAAGGAAGCTGAGTCGAAACCGGCACAATCTACAACTAGTGATGCACCGGGTGCAAGTTCAGAGGTCACTGATAATGCTGAACCTAGCACAAGCAATGATGATGCTAATGATGAATCTGTCGTAAATATGGATAGTGAAGATGATGTCGACAATTTACAGCTTGCTTGGGAAATGCTTGACCTGGCCCGCAGTATACTGTCGCGGCGCGCGGCGGGCGGGGGCGAGGGCGCGGGGGGCGGCGCGGCGGCGCGGGCGCTGCTCGCCGACACGCACCTCGCGCTCGGGGAGGTCGCCCTCGAGAGCGAAACGTACGATAAAGCTGTTCTTGATATGCAGAGCTGCTTGGAGATCCAGAAGGAATTGTATCACAGCGACGACCGGCGTATTGCTGAAACACATTATCAAATTGGGCTGGCTAATTCCCTCGCTTCAAACTTCGAAGACGCGGTCACTCACTTCAAGAACGCCGCCAATATACTCGAAACCAGAATAAAGACTCTCGAGGGTCCAACCGCAGCCACGGACGACGCCACCGTCAAGAAGTACTCTTCAGCGGACCCGCTCTATACAATCGAAGGGGAGATCAAGGAATTGAAGGAACTTCTGCCGGAGATCCAAGAGAAAATACAAGACATGATGGATTATAAAGCGGAGACAATAAAACGGGTACGCGAAACCCTGTGCCCGTCGAACGGCGAGAGCTCTACACAAAATGGCGCTGGCTCTAGCGCGTCTCAGCCGCGACCGGCGGCTTCAGACATCTCGCATCTCATCAAGAGGAAACGGAAGGCGAGCAACGAACCCGAGGCCTCACCCGCGAAGAAGATGAACACGTGA

Protein

MADMIEVSTATPAELLGAGRRHLAVRDFHSAAEVLAKACELLAKEHGDTADQCAEAYLWYGQALLGLSRDESGVLGDGMPGSGNVDDDDEEQDDDDNNDNEQTEQSCEPEKSKTEHNEAESTSMEADTSTKEAESKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESVVNMDSEDDVDNLQLAWEMLDLARSILSRRAAGGGEGAGGGAAARALLADTHLALGEVALESETYDKAVLDMQSCLEIQKELYHSDDRRIAETHYQIGLANSLASNFEDAVTHFKNAANILETRIKTLEGPTAATDDATVKKYSSADPLYTIEGEIKELKELLPEIQEKIQDMMDYKAETIKRVRETLCPSNGESSTQNGAGSSASQPRPAASDISHLIKRKRKASNEPEASPAKKMNT

Uniprot

H9JBV5   A0A2A4ITI6   A0A2H1VJI6   A0A3S2PHI2   A0A194QZ08   A0A194PK27   + More
A0A212EXZ8   S4PBX8   A0A1B6EV64   A0A195CRR4   E2C4L8   A0A1B6IXI9   A0A0J7KTG3   E2AB21   A0A067QPJ4   A0A1B6DE97   K7IY03   A0A2J7Q594   A0A2J7Q5A3   A0A2P8Z7C4   A0A1Z5LBI0   T1J7G1   A0A0C9RKU6   A0A2J7Q5A1   A0A293MXL7   C0HD91   A0A1S3LZP0   L7MJZ5   A0A131XAE3   A0A224YJK1   A0A1U7UNY9   A0A3B4U0G3   A0A060XAN2   A0A3Q0GSJ2   K9IXV7   A0A2Y9IU37   A0A341BGJ2   A0A3Q0CV51   A0A3Q0SKA0   A0A088AR75   E0VU41   A0A224XI19   A0A2I2Z1E4   K7FW38   A0A1A8C2M4   G9KCI8   A0A2Y9QHM9   A0A3P8PP92   A0A384CRP6   A0A3Q7MXY4   A0A384CRR0   A0A3Q7WID7   F1PLT4   A0A146VEQ0   A0A2Y9GRK2   A0A2K5E4R0   A0A3B4GWK8   A0A1V9XPK5   A0A1Y1MUX3   A0A250Y127   A0A2K5E4W1   A5D969   A0A2Y9GL39   T1I7P5   F6QS28   A0A287CWU6   A0A0V0G5K5   A0A2A3E9F0   A0A0L7REX9   A0A0P4VQQ3   A0A337SSX0   A0A2H8TMS4   A0A2H8TY52   A0A3P8ZG85   A0A1S3APW4   A0A3Q2VNG1   V4AN81   A0A3P8XER2   G3PUP7   A0A310SDK9   A0A1S3F8T4   A0A2R8N876   J9K8C9   A0A1W5A0J1   A0A023EYY4   A0A1S8WGZ4   A0A3B3BUN6   A0A183RP01   A0A075A523   A0A3B3BTV3  

Pubmed

19121390    26354079    22118469    23622113    20798317    24845553    + More
20075255    29403074    28528879    20433749    25576852    28049606    28797301    24755649    26319212    20566863    22398555    17381049    23236062    24813606    16341006    28327890    28004739    28087693    12140684    16305752    19393038    27129103    17975172    25069045    23254933    25474469    29451363   

EMBL

BABH01014929    NWSH01008657    PCG62460.1    ODYU01002912    SOQ40999.1    RSAL01000031    + More
RVE51622.1    KQ461137    KPJ08831.1    KQ459603    KPI93079.1    AGBW02011637    OWR46366.1    GAIX01004401    JAA88159.1    GECZ01027932    JAS41837.1    KQ977349    KYN03396.1    GL452536    EFN77098.1    GECU01016083    JAS91623.1    LBMM01003369    KMQ93603.1    GL438234    EFN69297.1    KK853162    KDR10439.1    GEDC01013277    JAS24021.1    NEVH01017587    PNF23754.1    PNF23755.1    PYGN01000163    PSN52394.1    GFJQ02002392    JAW04578.1    JH431929    GBYB01007144    GBYB01013932    JAG76911.1    JAG83699.1    PNF23756.1    GFWV01019372    MAA44100.1    BT060297    ACN12657.1    GACK01001530    JAA63504.1    GEFH01003967    JAP64614.1    GFPF01006660    MAA17806.1    FR904936    CDQ73915.1    GABZ01006059    JAA47466.1    DS235779    EEB16897.1    GFTR01008336    JAW08090.1    CABD030002915    CABD030002916    CABD030002917    CABD030002918    AGCU01047627    AGCU01047628    HADZ01009392    SBP73333.1    JP014015    AES02613.1    AAEX03009779    AAEX03009780    GCES01070886    JAR15437.1    MNPL01006362    OQR75440.1    GEZM01026174    JAV87177.1    GFFV01002652    JAV37293.1    BT030488    ABQ12928.1    ACPB03000176    AGTP01008745    AGTP01008746    AGTP01008747    AGTP01008748    GECL01002838    JAP03286.1    KZ288313    PBC28357.1    KQ414608    KOC69369.1    GDKW01001777    JAI54818.1    AANG04003279    GFXV01003475    MBW15280.1    GFXV01006273    MBW18078.1    KB199650    ESP05629.1    KQ767621    OAD53383.1    ABLF02018459    GBBI01004823    JAC13889.1    KV907170    OON13722.1    KL596893    KER22529.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000078542    UP000008237    UP000036403    UP000000311    UP000027135    UP000002358    UP000235965    UP000245037    UP000087266    UP000189704    UP000261420    UP000193380    UP000189705    UP000248482    UP000252040    UP000189706    UP000261340    UP000005203    UP000009046    UP000001519    UP000007267    UP000248480    UP000265100    UP000261680    UP000286641    UP000291021    UP000286642    UP000002254    UP000248481    UP000233020    UP000261460    UP000192247    UP000015103    UP000009136    UP000005215    UP000242457    UP000053825    UP000011712    UP000265140    UP000079721    UP000264840    UP000030746    UP000007635    UP000081671    UP000008225    UP000007819    UP000192224    UP000261560    UP000050792   

PRIDE

H9JBV5    F1PLT4   

Pfam

PF10516   SHNi-TPR        + More
PF13181   TPR_8

Interpro

IPR013026   TPR-contain_dom        + More
IPR019544   Tetratricopeptide_SHNi-TPR_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JBV5   A0A2A4ITI6   A0A2H1VJI6   A0A3S2PHI2   A0A194QZ08   A0A194PK27   + More
A0A212EXZ8   S4PBX8   A0A1B6EV64   A0A195CRR4   E2C4L8   A0A1B6IXI9   A0A0J7KTG3   E2AB21   A0A067QPJ4   A0A1B6DE97   K7IY03   A0A2J7Q594   A0A2J7Q5A3   A0A2P8Z7C4   A0A1Z5LBI0   T1J7G1   A0A0C9RKU6   A0A2J7Q5A1   A0A293MXL7   C0HD91   A0A1S3LZP0   L7MJZ5   A0A131XAE3   A0A224YJK1   A0A1U7UNY9   A0A3B4U0G3   A0A060XAN2   A0A3Q0GSJ2   K9IXV7   A0A2Y9IU37   A0A341BGJ2   A0A3Q0CV51   A0A3Q0SKA0   A0A088AR75   E0VU41   A0A224XI19   A0A2I2Z1E4   K7FW38   A0A1A8C2M4   G9KCI8   A0A2Y9QHM9   A0A3P8PP92   A0A384CRP6   A0A3Q7MXY4   A0A384CRR0   A0A3Q7WID7   F1PLT4   A0A146VEQ0   A0A2Y9GRK2   A0A2K5E4R0   A0A3B4GWK8   A0A1V9XPK5   A0A1Y1MUX3   A0A250Y127   A0A2K5E4W1   A5D969   A0A2Y9GL39   T1I7P5   F6QS28   A0A287CWU6   A0A0V0G5K5   A0A2A3E9F0   A0A0L7REX9   A0A0P4VQQ3   A0A337SSX0   A0A2H8TMS4   A0A2H8TY52   A0A3P8ZG85   A0A1S3APW4   A0A3Q2VNG1   V4AN81   A0A3P8XER2   G3PUP7   A0A310SDK9   A0A1S3F8T4   A0A2R8N876   J9K8C9   A0A1W5A0J1   A0A023EYY4   A0A1S8WGZ4   A0A3B3BUN6   A0A183RP01   A0A075A523   A0A3B3BTV3  

KEGG

101735399    K11291 nuclear autoantigenic sperm protein | (RefSeq) nuclear autoantigenic sperm protein

GO

GO:0006335   GO:0006336   GO:0032991   GO:0000790   GO:0005654   GO:0042393   GO:0016021   GO:0005515   GO:0006508   GO:0008237   GO:0005245   GO:0005891   GO:0004674   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

408

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00063

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.01236

outside

1  -  408

 

 

Pi

194.14402

Theta

153.063191

Tajima's D

0.961154

CLR

0.575571

CSRT

0.650367481625919

Interpretation

Uncertain