SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10465
Pre Gene Modal
BGIBMGA007099
Annotation
PREDICTED:_prostaglandin_reductase_1-like_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 3.01
 

Sequence

CDS
ATGATTAAAGCACGTAAATACGTTGTCAAGAAATATTTCGAAGGTGTTCCGAAGCGAGACGATTTCGAGATCATAGAGTTTGTACTGCCAGCATTGAAAGACGGCGAAATACTAGTCAAGGTAGAATGGATCAGTCTAGACCCGTATCAACGAGCTTACAACAGGCAATACCAATTACCATACGACCAATTCGGCTACCAAATAGGAATCGTTCAAGAATCTATGGATAATAATTTTCCAATCGGCGTACGGGTGGTCTCACACAAAGGCTGGTTTGACTATTGCATTATAAATCCAAGTATACCTGATGCTACAGGAAATAAACCATACATACTGCCCGATCTGAAAGGACTGCCAAATTCATTGGGCGTCGGTGCTGGGGGAATGCATGGCGCGACAGCATATTTTGGTTTCTTGGAAATTTGCAAACCTAAGCCCGGCGAAACGGTAGTAGTGACAGGGGCCGCCGGAGCCGTTGGTTCTTTGGTAGGGCAGATAGCGAAGATAAAGGGATGCAAAGTGATTGGCTTCACAGGATCTGACGAGAAGGTTGAGTGGCTTGAGAAAGAAATAGGTTTTGACAAAGCTTTTAATTACAAAACCGTGAATATTCCAACGGCATTAAAACAAATCGCCCCTAAAGGTGTTGACTGTTATTTTGACAACGTTGGCGGGGAAATTAGTAGTCAGATCATAAATCAAATGAACTTATTCGGTAGGATCTCCGCATGTGGCAGTATCAGTGCCTACAACGACAACCCTACAAAGCTGCCCAAAGCCACAATAATACAGCCTTCTATAGTGATGAAACAATTGAAAATTGAAGGTTTCATAGTGTGGCGTTGGGGGGATCGCTGGCCTGCCGCCATATCTGAAATTGTGGACTGGATCAAAAGTGGACAACTGAAGGCTAAGGAGCACATTACAGAAGGTTTTGACAATCTTTACGAAGCCTTAATAGGAGTGATGGCGGGAGAAAATATCGGAAAAGCTGTGCTTAGAGTCTAA
Protein
MIKARKYVVKKYFEGVPKRDDFEIIEFVLPALKDGEILVKVEWISLDPYQRAYNRQYQLPYDQFGYQIGIVQESMDNNFPIGVRVVSHKGWFDYCIINPSIPDATGNKPYILPDLKGLPNSLGVGAGGMHGATAYFGFLEICKPKPGETVVVTGAAGAVGSLVGQIAKIKGCKVIGFTGSDEKVEWLEKEIGFDKAFNYKTVNIPTALKQIAPKGVDCYFDNVGGEISSQIINQMNLFGRISACGSISAYNDNPTKLPKATIIQPSIVMKQLKIEGFIVWRWGDRWPAAISEIVDWIKSGQLKAKEHITEGFDNLYEALIGVMAGENIGKAVLRV

Summary

EMBL
BABH01014929    KQ461137    KPJ08829.1    KQ459603    KPI93076.1    AK405232    + More
BAM20599.1    DQ443338    ABF51427.1    JTDY01010417    KOB58214.1    GEYN01000023    JAV02106.1    KP899554    AKQ06153.1    JTDY01003120    KOB70117.1    KPI93078.1    KPJ08830.1    AGBW02014376    OWR41771.1    KPI93077.1    GEYN01000025    JAV02104.1    AGBW02011637    OWR46367.1    KP237874    AKD01727.1    KC007342    AGQ45607.1    NWSH01003541    PCG66134.1    KP237886    AKD01739.1    PCG66132.1    PCG66135.1    ODYU01002912    SOQ40998.1    NWSH01003564    PCG66105.1    PCG66104.1    KQ461154    KPJ08550.1    LC017750    BAR64764.1    KQ459595    KPI95625.1    KP237896    AKD01749.1    KF960800    AII22002.1    AGBW02000285    OWR55798.1    KP899553    AKQ06152.1    NNAY01001646    OXU23328.1    GBYB01000237    JAG70004.1    NEVH01015823    PNF26620.1    KQ982351    KYQ57274.1    PNF26623.1    NEVH01002552    PNF42096.1    KK852493    KDR22751.1    ADTU01021185    ADTU01021186    GECZ01021917    GECZ01001753    GECZ01001434    JAS47852.1    JAS68016.1    JAS68335.1    GDAI01001023    JAI16580.1    KK852415    KDR24385.1    KYQ57275.1    EZ407138    ACX53701.1    KQ976738    KYM75864.1    KQ977372    KYN03267.1    RSAL01000041    RVE50877.1    KQ414706    KOC63074.1    BT126534    AEE61498.1    KQ981037    KYN10151.1    KZ288220    PBC32143.1    UFQS01002035    UFQT01002035    SSX13033.1    SSX32473.1    KQ981208    KYN44744.1    PNF26622.1    KYN03268.1    ODYU01002578    SOQ40267.1    ODYU01005116    SOQ45664.1    KK107446    EZA50798.1    GL888208    EGI64927.1    GGMS01016030    MBY85233.1    GALX01002716    JAB65750.1    KQ979685    KYN19823.1    AAZX01001296    APGK01045490    KB741037    KB632085    ENN74606.1    ERL88639.1    BT126738    AEE61700.1    PCG66133.1    NWSH01000966    PCG73369.1    KQ435878    KOX69991.1    GBYB01007656    JAG77423.1    CH477756    EAT36569.1    EJY57913.1    KYN44745.1    UFQT01000047    SSX18926.1    UFQS01001180    UFQT01001180    SSX09563.1    SSX29364.1    GAPW01002510    JAC11088.1    GG666487    EEN64190.1    BABH01014001    AAZX01013836    GDIQ01265642    JAJ86082.1    JXUM01001306    KQ560119    KXJ84395.1    GDIP01220647    GDIP01062315    JAM41400.1    GL732609    EFX71508.1    EGI64926.1    GDIP01255092    JAI68309.1    AXCM01004618    GDIQ01096505    GDIP01111355    GDIP01043199    GDIQ01054177    LRGB01000190    JAL55221.1    JAL92359.1    KZS20464.1    GDIQ01170510    JAK81215.1    GGMR01008520    MBY21139.1    GL732526    EFX88216.1    EEN64191.1    KYQ57273.1    GAIX01006576    JAA85984.1    JXUM01014868    KQ560415    KXJ82523.1    GDIP01079654    JAM24061.1    CH477884    EAT35376.1    GDIQ01187424    GDIP01140398    JAK64301.1    JAL63316.1    CVRI01000036    CRK93094.1   
Pfam
PF16884   ADH_N_2        + More
PF00107   ADH_zinc_N
PF01035   DNA_binding_1
PF02870   Methyltransf_1N
Interpro
IPR011032   GroES-like_sf        + More
IPR036291   NAD(P)-bd_dom_sf       
IPR041694   ADH_N_2       
IPR013149   ADH_C       
IPR020843   PKS_ER       
IPR014190   PTGR1       
IPR036388   WH-like_DNA-bd_sf       
IPR001497   MethylDNA_cys_MeTrfase_AS       
IPR014048   MethylDNA_cys_MeTrfase_DNA-bd       
IPR036631   MGMT_N_sf       
IPR008332   MethylG_MeTrfase_N       
IPR036217   MethylDNA_cys_MeTrfase_DNAb       
SUPFAM
SSF50129   SSF50129        + More
SSF51735   SSF51735       
SSF46767   SSF46767       
SSF53155   SSF53155       
Gene 3D
PDB
2DM6     E-value=2.73815e-73,     Score=699

Ontologies

Topology

Length:
335
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.50911
Exp number, first 60 AAs:
0.00023
Total prob of N-in:
0.17622
outside
1  -  335
 
 

Population Genetic Test Statistics

Pi
103.924518
Theta
172.416985
Tajima's D
-1.232521
CLR
39.117549
CSRT
0.0978451077446128
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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