Gene

KWMTBOMO10459  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007003

Annotation

carboxyl_terminus_of_heat_shock_cognate70_interacting_protein_[Bombyx_mori]

Location

Bomo_Chr17(-):11843099-11847786      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.928

CDS

ATGAGCAAACATATGTATTCGACGGCAAATTTGACCGATAAAGAACTGAAGGAACAAGGGAATAGGCTTTTTAGTTTACGGCGGTACGAAGATGCAAAGAATTGCTATACAAAAGCTATTATAAAAAATCCATCAGTGGCCACATACTTCACAAACCGTGCCCTTTGTCATCTCAAAATGAAACACTGGGAGGCAACATGTCAAGATTGTCGAAGGGCCCTTGACATTGATACAAACCAGGTCAAAGGACATTTCTTTCTGGGACAGGCTCTGGTTGAACTTGAATGTTATGATGAAGCCATCAAGCATCTGCATAGAGCAAATGATCTGGCTCGTGAGCAGAAGCTAAATTTCGGTGATGACATAGCTGCACAGCTACGCACAGCACGGAAGAAGAGATGGAATGTACAAGAGGAGAAAAGGATAGCCCAAGAAATTGAATTGCAAACATATTTAAACAGGCTAATAAATGAAGACATGCAACGTAGGATAGATACCCTGAAACTAGATGGAAACAATGAAGATGATCGTAATACAAAAGTATCCAAAATTGAGGAAGAATGTAATAACTACTCTAGTGAATTAAATAATTTATTTTCAAAAATTGACGATCGCCGAAGGAAGCGCGATGTGCCAGATTACCTATGTGGTAAAATAAGCTTTGAAATCCTGAATGAGCCGGTCATCACTCCGAGCGGTATCACTTATGAGAAAAAGGACATTGAGGAACATTTAGAACGCGTTGGTCACTTCGATCCGGTTACCCGTGTGAAGTTGACGGCAGATCAGCTGATACCCAACTTCACTATGAAGGAGGTCGTTGACGCTTTTCTGCAGGACAACGAATGGGCCCTCGACTATTGA

Protein

MSKHMYSTANLTDKELKEQGNRLFSLRRYEDAKNCYTKAIIKNPSVATYFTNRALCHLKMKHWEATCQDCRRALDIDTNQVKGHFFLGQALVELECYDEAIKHLHRANDLAREQKLNFGDDIAAQLRTARKKRWNVQEEKRIAQEIELQTYLNRLINEDMQRRIDTLKLDGNNEDDRNTKVSKIEEECNNYSSELNNLFSKIDDRRRKRDVPDYLCGKISFEILNEPVITPSGITYEKKDIEEHLERVGHFDPVTRVKLTADQLIPNFTMKEVVDAFLQDNEWALDY

Uniprot

A0A0U4VG56   W0SPF2   A0A212FCY4   A0A194PI28   A0A194QU33   A0A3S2NXN6   + More
A0A2H1VHP7   A0A2J7PKN0   A0A1B0GKC2   A0A067R8Z9   H9JBV8   A0A1B6G570   U5ET79   A0A1L8DTG9   A0A1B6DL63   A0A182GKR6   A0A1Y1N6U1   A0A023EMJ4   Q0IEA0   A0A0K8TSK1   E0VIW9   A0A1Q3FBX5   A0A0A9YU33   B0WRP1   A0A023F3I0   A0A069DS67   T1I664   A0A0L0CUB8   A0A1W4XLF9   A0A182Y0C4   A0A2M4AFN6   A0A2M3ZHS6   W5JRS9   A0A182F1C9   A0A182US93   A0A182TMF8   A0A182K2G9   A0A182W6D7   A0A182XNR0   Q7PWM1   A0A182I7B8   A0A182QCP2   J3JTI4   N6T896   A0A182RDT5   A0A084W7E4   A0A182LMT7   A0A182MZ64   A0A1B0FHJ5   A0A1A9UYB3   A0A1A9Z9G0   A0A1A9Y515   A0A1B0AX00   A0A1I8M657   D6WW37   A0A1I8NVH1   A0A1A9VZS6   B4P0P3   B3N5F6   A0A0K8VHY7   B4LVD2   A0A182PWB7   Q29P26   B4G771   B4JPY9   B3MJI4   W8C7B5   A0A034WQI1   B4Q9A7   A0A1W4UT87   A0A0A1WJ63   B4HWQ0   A0A2P8XQ25   B4MUC2   A0A1J1HJC2   A0A0M4EFL7   Q9XYW6   A0A1I8P4N5   A0A2R7WVM3   A0A0C9RF75   B4KHS5   A0A1B0GN12   A0A1E1XQ53   A0A232FK31   K7J5N0   A0A131XGW0   L7M2E2   A0A224Z9B9   A0A131Z3K6   T1J5N3   A0A1E1XGS6   A0A023GFG4   A0A182J3V4   A0A0K8W6Z2   A0A0L7R2S8   A0A0N0U6R2   A0A2A3E4R6   A0A088A5M4   V5IH04   E2B635  

Pubmed

22118469    26354079    24845553    19121390    26483478    28004739    + More
24945155    17510324    26369729    20566863    25401762    26823975    25474469    26334808    26108605    25244985    20920257    23761445    12364791    14747013    17210077    22516182    23537049    24438588    20966253    25315136    18362917    19820115    17994087    17550304    15632085    24495485    25348373    22936249    25830018    29403074    10330192    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    29209593    28648823    20075255    28049606    25576852    28797301    26830274    28503490    25765539    20798317   

EMBL

LC097139    BAT57051.1    AB900069    BAO31679.1    AGBW02009131    OWR51592.1    + More
KQ459603    KPI93071.1    KQ461137    KPJ08824.1    RSAL01000031    RVE51626.1    ODYU01002591    SOQ40291.1    NEVH01024535    PNF16898.1    AJWK01028655    KK852663    KDR19073.1    BABH01014926    GECZ01028932    GECZ01013900    GECZ01012181    JAS40837.1    JAS55869.1    JAS57588.1    GANO01002900    JAB56971.1    GFDF01004414    JAV09670.1    GEDC01010852    JAS26446.1    JXUM01070451    JXUM01070452    JXUM01070453    KQ562607    KXJ75494.1    GEZM01011813    JAV93429.1    GAPW01003040    JAC10558.1    CH477899    EAT35236.1    GDAI01000510    JAI17093.1    DS235212    EEB13325.1    GFDL01009960    JAV25085.1    GBHO01010527    GBHO01010524    GBRD01012794    GDHC01011831    JAG33077.1    JAG33080.1    JAG53032.1    JAQ06798.1    DS232058    EDS33445.1    GBBI01002856    JAC15856.1    GBGD01002392    JAC86497.1    ACPB03001820    JRES01000005    KNC34959.1    GGFK01006274    MBW39595.1    GGFM01007227    MBW27978.1    ADMH02000654    ETN65429.1    AAAB01008984    EAA14840.2    APCN01003378    AXCN02002068    BT126541    KB632186    AEE61505.1    ERL89740.1    APGK01039896    KB740975    ENN76454.1    ATLV01021228    KE525315    KFB46138.1    CCAG010020379    JXJN01004962    KQ971361    EFA08658.1    CM000157    EDW87938.1    CH954177    EDV59035.1    GDHF01021199    GDHF01017998    GDHF01013842    GDHF01003138    JAI31115.1    JAI34316.1    JAI38472.1    JAI49176.1    CH940649    EDW63311.1    CH379058    EAL34467.1    CH479180    EDW28325.1    CH916372    EDV98969.1    CH902620    EDV32352.1    GAMC01000627    JAC05929.1    GAKP01002939    GAKP01002936    JAC56013.1    CM000361    CM002910    EDX04549.1    KMY89548.1    GBXI01015425    JAC98866.1    CH480818    EDW52445.1    PYGN01001553    PSN34119.1    CH963857    EDW76048.1    CVRI01000001    CRK86369.1    CP012523    ALC39267.1    AF129084    AE014134    AY069760    AAD33399.1    AAF52954.1    AAL39905.1    KK855587    PTY23200.1    GBYB01015229    JAG84996.1    CH933807    EDW13362.2    AJVK01027886    AJVK01027887    GFAA01001999    JAU01436.1    NNAY01000089    OXU31096.1    GEFH01003261    JAP65320.1    GACK01007770    JAA57264.1    GFPF01012084    MAA23230.1    GEDV01003185    JAP85372.1    JH431866    GFAC01000714    JAT98474.1    GBBM01003938    JAC31480.1    GDHF01005505    GDHF01004381    JAI46809.1    JAI47933.1    KQ414665    KOC65134.1    KQ435732    KOX77551.1    KZ288400    PBC26282.1    GANP01005782    JAB78686.1    GL445914    EFN88824.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000283053    UP000235965    UP000092461    + More
UP000027135    UP000005204    UP000069940    UP000249989    UP000008820    UP000009046    UP000002320    UP000015103    UP000037069    UP000192223    UP000076408    UP000000673    UP000069272    UP000075903    UP000075902    UP000075881    UP000075920    UP000076407    UP000007062    UP000075840    UP000075886    UP000030742    UP000019118    UP000075900    UP000030765    UP000075882    UP000075884    UP000092444    UP000078200    UP000092445    UP000092443    UP000092460    UP000095301    UP000007266    UP000095300    UP000091820    UP000002282    UP000008711    UP000008792    UP000075885    UP000001819    UP000008744    UP000001070    UP000007801    UP000000304    UP000192221    UP000001292    UP000245037    UP000007798    UP000183832    UP000092553    UP000000803    UP000009192    UP000092462    UP000215335    UP000002358    UP000075880    UP000053825    UP000053105    UP000242457    UP000005203    UP000008237   

PRIDE

W0SPF2    H9JBV8    Q9XYW6   

Pfam

PF04564   U-box        + More
PF18391   CHIP_TPR_N
PF07719   TPR_2
PF13181   TPR_8
PF00515   TPR_1
PF14799   FAM195

Interpro

IPR013026   TPR-contain_dom        + More
IPR003613   Ubox_domain       
IPR019734   TPR_repeat       
IPR041312   CHIP_TPR_N       
IPR013083   Znf_RING/FYVE/PHD       
IPR011990   TPR-like_helical_dom_sf       
IPR013105   TPR_2       
IPR001440   TPR_1       
IPR029428   MCRIP       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10     3.30.40.10    

ProteinModelPortal

A0A0U4VG56   W0SPF2   A0A212FCY4   A0A194PI28   A0A194QU33   A0A3S2NXN6   + More
A0A2H1VHP7   A0A2J7PKN0   A0A1B0GKC2   A0A067R8Z9   H9JBV8   A0A1B6G570   U5ET79   A0A1L8DTG9   A0A1B6DL63   A0A182GKR6   A0A1Y1N6U1   A0A023EMJ4   Q0IEA0   A0A0K8TSK1   E0VIW9   A0A1Q3FBX5   A0A0A9YU33   B0WRP1   A0A023F3I0   A0A069DS67   T1I664   A0A0L0CUB8   A0A1W4XLF9   A0A182Y0C4   A0A2M4AFN6   A0A2M3ZHS6   W5JRS9   A0A182F1C9   A0A182US93   A0A182TMF8   A0A182K2G9   A0A182W6D7   A0A182XNR0   Q7PWM1   A0A182I7B8   A0A182QCP2   J3JTI4   N6T896   A0A182RDT5   A0A084W7E4   A0A182LMT7   A0A182MZ64   A0A1B0FHJ5   A0A1A9UYB3   A0A1A9Z9G0   A0A1A9Y515   A0A1B0AX00   A0A1I8M657   D6WW37   A0A1I8NVH1   A0A1A9VZS6   B4P0P3   B3N5F6   A0A0K8VHY7   B4LVD2   A0A182PWB7   Q29P26   B4G771   B4JPY9   B3MJI4   W8C7B5   A0A034WQI1   B4Q9A7   A0A1W4UT87   A0A0A1WJ63   B4HWQ0   A0A2P8XQ25   B4MUC2   A0A1J1HJC2   A0A0M4EFL7   Q9XYW6   A0A1I8P4N5   A0A2R7WVM3   A0A0C9RF75   B4KHS5   A0A1B0GN12   A0A1E1XQ53   A0A232FK31   K7J5N0   A0A131XGW0   L7M2E2   A0A224Z9B9   A0A131Z3K6   T1J5N3   A0A1E1XGS6   A0A023GFG4   A0A182J3V4   A0A0K8W6Z2   A0A0L7R2S8   A0A0N0U6R2   A0A2A3E4R6   A0A088A5M4   V5IH04   E2B635  

PDB

2C2L     E-value=7.70189e-86,     Score=807

KEGG

101746780    K09561 STIP1 homology and U-box containing protein 1 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein l

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0004842   GO:0016874   GO:0046983   GO:0030018   GO:0045862   GO:0046627   GO:0061630   GO:0031398   GO:0030911   GO:0046332   GO:0031943   GO:0030579   GO:0032436   GO:0030544   GO:0005737   GO:0000209   GO:0016567   GO:0051879   GO:0043161   GO:0005515   GO:0005245   GO:0005891   GO:0004674   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

287

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00449

Exp number, first 60 AAs:

0.00317

Total prob of N-in:

0.10422

outside

1  -  287

 

 

Pi

176.939472

Theta

184.583502

Tajima's D

-0.534491

CLR

0.332577

CSRT

0.236338183090845

Interpretation

Uncertain