SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10458
Annotation
Uncharacterized_protein_OBRU01_16634_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 3.302
 

Sequence

CDS
ATGTTTGGATTAGATCGAATAGGATCAAATCGACGGGTCCGAGACGCATCATATGGGTCATCATCAGACTCCGACGGCGAGTTGGAGGGCATCAGCGGCGAGCCCTGGGGTGTCGCGAGACTACTGTATGCTGGTCTGGCTACTTTGGCCGTCGGTCTCGTTGTTTACTTCGTTGGCACCGGAGACAAGGGTTTCAAAACGCCGGCCCTACGGCTGGTGGGGCCTTCGCTCATTGTTGCGGGTCTTGCGTGTTGTCTCCTTCGTATCGCCTTTTGTATATTCGCCAAGCCCTGCTGTCGTCGACGGACCAACTACAAGGAGAGCAGAAGACTGTCTGGCTGTGTCGAGGGAGAAGAGATGCCGTTGGCGGGGAGCGGGTCGCGGGGAGTTGGACCCGCGCAGTGCTCGCCCGCGCGACGCCTCGACGCCTCCTCCTGCGACGTGTCCAGCCTCTCCAGCGGGGAGGAGGACGAGCGCATGCGACGGTATCGCACCGCATCGCTGCATCCTCCTATTTTACACCAGGTCATGGCGCATCAAAATGGCGGACAAAGCGGCCATCGGTTATCACCACAAGGCACGTTGCGACACAGTCCGTCCCCGCAGAGCGCGGCTCGGCACACGCCGTCACCGCACAGCACTATGCACCACAGTCCGCCGACGCAGGCCGCCGCCTTGCCCGGTGCAGCGGTGCAACAAAGTGCAATACCCAGCGCAGTGCCGCTAAGCGCTACGTTACCAAGCGCAATGGCGTCGAGCGCGAACAATGCCAACGCTGGTCGCCGACCGCCCCCTCGCAACGTCTCGTTCGCCGGCGGATCCGACGGCGAACTCGTCCTTAGTCCCGCCCAACTACGGTCCTAA
Protein
MFGLDRIGSNRRVRDASYGSSSDSDGELEGISGEPWGVARLLYAGLATLAVGLVVYFVGTGDKGFKTPALRLVGPSLIVAGLACCLLRIAFCIFAKPCCRRRTNYKESRRLSGCVEGEEMPLAGSGSRGVGPAQCSPARRLDASSCDVSSLSSGEEDERMRRYRTASLHPPILHQVMAHQNGGQSGHRLSPQGTLRHSPSPQSAARHTPSPHSTMHHSPPTQAAALPGAAVQQSAIPSAVPLSATLPSAMASSANNANAGRRPPPRNVSFAGGSDGELVLSPAQLRS

Summary

Ontologies

Topology

Length:
287
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.7768500000001
Exp number, first 60 AAs:
21.22906
Total prob of N-in:
0.71772
POSSIBLE N-term signal
sequence
inside
1  -  35
TMhelix
36  -  58
outside
59  -  72
TMhelix
73  -  95
inside
96  -  287
 
 

Population Genetic Test Statistics

Pi
206.084092
Theta
170.600778
Tajima's D
0.707575
CLR
0.549467
CSRT
0.571471426428679
Interpretation
Uncertain
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