SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10457
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_CLEC16A_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.342
 

Sequence

CDS
ATGATATTATGGAGAGGCGACGGCGACGACTCAGAGCGGAGGCTCCGAAGGCCGAGCGGTCACTTACTGAAAGACGGCATCGTCGTCTATCGAGAACGAACCACGAGCAGAGAGAGTAGCGTGTCGAGAGGAAGCAGCGGTTCCCGAGAGGGATCTCCGAGGGGCCACCAAGAGGAAATACCACTCGAAGATATACGGAGGAACGTCGCCTCCACCAGCGCCGCGACTCCAAATGTCGTACCGCAGATAAATGCACAACCGAGTACGTCCCAGGCGAAGACCCGAAGCAATTCGTCTGAAGAAACCTCGTTTATATCGGGCGAAGCGCCGCGAACGAAACGGAGAGGCCTCGTCGAGACTATTTGA
Protein
MILWRGDGDDSERRLRRPSGHLLKDGIVVYRERTTSRESSVSRGSSGSREGSPRGHQEEIPLEDIRRNVASTSAATPNVVPQINAQPSTSQAKTRSNSSEETSFISGEAPRTKRRGLVETI

Summary

Pfam
PF09758   FPL
Interpro
IPR039272   CLEC16A/TT9        + More
IPR019155   CLEC16A/TT9_N       

Ontologies

GO

Topology

Length:
121
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.14887
outside
1  -  121
 
 

Population Genetic Test Statistics

Pi
23.060105
Theta
27.043224
Tajima's D
0.053903
CLR
0.539271
CSRT
0.388930553472326
Interpretation
Uncertain
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