SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10455
Pre Gene Modal
BGIBMGA007005
Annotation
PREDICTED:_apyrase_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 2.505
 

Sequence

CDS
ATGTATTCACATAAAGGGCGTGGTATGGAATTGTCTGAACTAATTGTTTATGATGGTAGACTGCTCACATTTGATGATCGATCAGGCATGGTTTTTGAAATAATATCTAACAAAATGGTGCCATGGTTAGTGTTGACTGATGGTAATGGTCATGTCGAAAAAGGCTTTAAATCAGAGTGGGCCGCAATGAAAGATGAAATTCTATACATAGGATCTATGGGCAAAGAATGGACAACTTCCAGTGGAGAGTTTGAGAACTATGACCCAATGTGGGTAAAAGCTGTTAATATAAATGGAGAGGTTCAACATTTGACATGGGTAAATCGATATAAAGCCATTAGAAGTTCAATCGGGGTACAATGGCCTGGTTATGTTATACACGAGTCAGGAGTCTGGTCACCTCTCAAGCGACTATGGCATTTCCTGCCGAGGAGGTGTAGTTACGAACAATACAATGAAACAAAGGACGAAATTAAGGGTTGCAACTACCTTATTACTGCAGATGATAATTTCAGAAATATTAAAGCTAACAAGATTACAAAATTTCAACCTAAGCATGGCTTCTCATCGTTCAAGTTTATACCTGGATCTAATGATGAGGTCATAGTGGCTTTGAAAACAACTGAGTTTGAAGGCAAGACCGCAACATACATAACAGCATTCACCACTGATGGCTTAGAGTTACTATCCGATACTTTTGTGGAAAACATGAAATATGAGGGCATCGAGTTTTTGTGA
Protein
MYSHKGRGMELSELIVYDGRLLTFDDRSGMVFEIISNKMVPWLVLTDGNGHVEKGFKSEWAAMKDEILYIGSMGKEWTTSSGEFENYDPMWVKAVNINGEVQHLTWVNRYKAIRSSIGVQWPGYVIHESGVWSPLKRLWHFLPRRCSYEQYNETKDEIKGCNYLITADDNFRNIKANKITKFQPKHGFSSFKFIPGSNDEVIVALKTTEFEGKTATYITAFTTDGLELLSDTFVENMKYEGIEFL

Summary

EMBL
BABH01014900    ODYU01001657    SOQ38184.1    KQ461137    KPJ08819.1    KQ459603    + More
KPI93067.1    NWSH01003936    PCG65661.1    AK403738    BAM19905.1    RSAL01000031    RVE51631.1    AGBW02008995    OWR51938.1    GDQN01010638    GDQN01005784    JAT80416.1    JAT85270.1    GAIX01000185    JAA92375.1    KQ971363    EFA07795.2    ATLV01019081    KE525262    KFB43567.1    ADMH02002101    ETN59125.1    AAAB01008987    EAA01797.3    APCN01000824    AXCM01006044    GGFJ01005993    MBW55134.1    GGFJ01005496    MBW54637.1    GGFJ01005497    MBW54638.1    GGFK01003880    MBW37201.1    GGFK01003889    MBW37210.1    GANO01003550    JAB56321.1    AXCN02001500    GGFM01002523    MBW23274.1    GDAI01000260    JAI17343.1    GGFM01002241    MBW22992.1    GGFM01002346    MBW23097.1    GAPW01001558    JAC12040.1    KB632255    ERL90655.1    APGK01041593    APGK01041594    KB740994    ENN75985.1    JXUM01122999    KQ566666    KXJ69928.1    CH477400    EAT41732.1    UFQS01002181    UFQT01002181    SSX13434.1    SSX32865.1    NNAY01000010    OXU32053.1    QOIP01000005    RLU22488.1    KK107570    EZA48791.1    GL445739    EFN89143.1    CH480815    EDW42607.1    AAZX01000616    KQ982649    KYQ53203.1    LJIG01022799    KRT78652.1    KQ981805    KYN35496.1    CH902617    EDV42762.1    KQ976842    KYN07938.1    GL888427    EGI61010.1    AJWK01020407    KQ976403    KYM92187.1    GFDF01002926    JAV11158.1    KQ978801    KYN28241.1    ADTU01025665    CP012526    ALC45803.1    GFDF01002925    JAV11159.1    GL763294    EFZ19843.1    AM294107    CAL26011.1    AM294102    FM245221    CAL26006.1    CAR93147.1    CH964232    EDW80935.1    GFDL01011257    JAV23788.1    AM294099    AM294100    AM294101    AM294103    AM294108    FM245215    FM245216    FM245219    CAL26003.1    CAL26004.1    CAL26005.1    CAL26007.1    CAL26012.1    CAR93141.1    CAR93142.1    CAR93145.1    AE014297    AY058610    AM294097    AM294098    AM294106    FM245213    FM245214    FM245217    FM245218    FM245220    FM245222    FM245223    FM245224    AAF54638.1    AAL13839.1    CAL26001.1    CAL26002.1    CAL26010.1    CAR93139.1    CAR93140.1    CAR93143.1    CAR93144.1    CAR93146.1    CAR93148.1    CAR93149.1    CAR93150.1    AM294104    CAL26008.1    CH954181    EDV49521.1    GFDL01011258    JAV23787.1    KZ288452    PBC25544.1    GL444953    EFN60371.1    LBMM01004987    KMQ91934.1    GEZM01061964    GEZM01061963    GEZM01061958    JAV70158.1    CM000364    EDX13368.1    AM294105    CAL26009.1    GEZM01061962    GEZM01061961    GEZM01061960    JAV70164.1    CM000070    EAL28807.2    CH479185    EDW38008.1    CM000160    EDW96923.1    AK417738    BAN20953.1    OUUW01000014    SPP88398.1    CH940652    EDW59838.1    GDHF01021823    GDHF01003531    JAI30491.1    JAI48783.1    CH916374    EDV91208.1    AJWK01010665    AJWK01010666    GBHO01016110    GBHO01005337    GBHO01005328    JAG27494.1    JAG38267.1    JAG38276.1    GAKP01020957    GAKP01020956    GAKP01020954    JAC37998.1    GBRD01013270    GBRD01013268    GBRD01010634    GDHC01007054    JAG52558.1    JAQ11575.1    GAMC01015787    GAMC01015785    GAMC01015783    JAB90770.1    GBXI01010202    JAD04090.1    EF092009    ABN12001.1    CH933806    EDW16010.1    GEBQ01006726    JAT33251.1   
Pfam
PF10300   DUF3808        + More
PF02978   SRP_SPB
PF00448   SRP54
PF02881   SRP54_N
Interpro
IPR036258   Apyrase_sf        + More
IPR009283   Apyrase       
IPR019412   Iml2/TPR_39       
IPR011990   TPR-like_helical_dom_sf       
IPR000897   SRP54_GTPase_dom       
IPR027417   P-loop_NTPase       
IPR013822   Signal_recog_particl_SRP54_hlx       
IPR003593   AAA+_ATPase       
IPR036891   Signal_recog_part_SRP54_M_sf       
IPR036225   SRP/SRP_N       
IPR004125   Signal_recog_particle_SRP54_M       
IPR022941   SRP54       
IPR042101   SRP54_N_sf       
SUPFAM
SSF101887   SSF101887        + More
SSF48452   SSF48452       
SSF52540   SSF52540       
SSF47446   SSF47446       
SSF47364   SSF47364       
PDB
2H2U     E-value=1.21746e-75,     Score=718

Ontologies

Topology

Length:
245
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01307
Exp number, first 60 AAs:
0.00454
Total prob of N-in:
0.08365
outside
1  -  245
 
 

Population Genetic Test Statistics

Pi
218.535491
Theta
149.342623
Tajima's D
-0.88103
CLR
1.324367
CSRT
0.160341982900855
Interpretation
Uncertain
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