SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10450
Pre Gene Modal
BGIBMGA007091
Annotation
PREDICTED:_probable_basic-leucine_zipper_transcription_factor_J_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 1.347
 

Sequence

CDS
ATGTGTTCAAACGAGACTCTGGTGGACCAGCTGGAATGTTATGTGGATGATTTAGTGGAATGTTTCGAAGATTTTGTCAAGAAATCACTGATCGTCATCACTATTGCTGTCGGTGCTGTCATTGGACTTCTGGTTTATGTGCTTAAGATGGTCACTGAAAGACAGGAAGCTCTTAGTCACGCCAGTATCGTACCAGCTCTAGAAGACATTTCTCGTCAGAGGGGTAATTCATCTGACCCAAATAACATTCCTACAAAAACAAGTGAAACAGTACTACATGACTACGAAGCAGAAAATACGCTGAATGCAGAAATCGATAAGAACGCTAAGAATTCTCCTGATACATCTACTAAATCAGCCAATACGTTACCGTTGCCTGTAATCGCTGGTTTTGACGCGAAAGTATTGAGAGATATCGGGTTATCCGACTGTTCTAAAGTGAGTTTCTATTAG
Protein
MCSNETLVDQLECYVDDLVECFEDFVKKSLIVITIAVGAVIGLLVYVLKMVTERQEALSHASIVPALEDISRQRGNSSDPNNIPTKTSETVLHDYEAENTLNAEIDKNAKNSPDTSTKSANTLPLPVIAGFDAKVLRDIGLSDCSKVSFY

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
150
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.67023
Exp number, first 60 AAs:
19.66281
Total prob of N-in:
0.08577
POSSIBLE N-term signal
sequence
outside
1  -  28
TMhelix
29  -  48
inside
49  -  150
 
 

Population Genetic Test Statistics

Pi
230.168577
Theta
201.867492
Tajima's D
0.467513
CLR
0
CSRT
0.506174691265437
Interpretation
Uncertain
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