SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10449
Annotation
Uncharacterized_protein_OBRU01_26304_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.201
 

Sequence

CDS
ATGAGGAATATATTAAATAAAAAAAACATTCTTTTTATTCTTTTTTTTGTGGTGATCTTGTTATTATTTCTAAAAACATTCAAGGACGTGACTATCCAGGAGCAATTTTTAAACGGTTATAAAATTATTACCGAAAATGATGAAATAAAAAATATTGAAGTCGTGACGACACCTCAAGCAACCAGAAAACAAGAAACGACAGAACCAAATGAGGCATCGAAATTAAAATACATACTTCAGTGGACTTCTCCACGGGGAGTACCATTTGCTTACATGGGAAAAGGACAGGAAGGTTTTATACAAAGAAAATGCCCACACACCAATTGTTTTGTGACCGCGGACCGCAATTTACTCGGTGATTATACAAAATTCGACGTGATAGCTTTCGCAGGACCTGACGTGGTACGCATGTCGGAAAGAGCTTTGCCTGAGAAGAGGTCACCGCATCAAAAATACGCATTCGCTACAATAGAATCCTCGGACAATTACCCAGTTTGCTCAAATCGATTTGACGGTTACTTTAATTGGACATGGACATTCCGACTGGATTCGGAAGTCCGATGGGGATATTTCAATGTCAAAGATAAAAACGAAAACGTTATTGGACCGAATAAAATAATGCACTGGATGAAAATTGAAGACATGGAACCGGTCAGCGAAGATTTCAAAATACAGTTAAAGTCTAAGTCTAAGGCCGCAGCGTGGTTTGTGTCAAATTGTTACACAAGAAGCAAAAGGGAAGATTTCGCTAATGAACTTCAAGTTGAACTGAAAAAGCACAATTTAGAACTAGATATCTATGGCAGATGTGGAAACCTTAAATGTTCCCGGGATACAGAAGAGGCATGTGATGAAATGATCAGAGAAAAATATTACTTTTACTTGTCGTTTGAAAACTCATTTGGTGAAGATTATGTCACAGAAAAATTATTACATGCCTTAGAATTCGACGCTGTTCCTGTAGTGTATGGCGGTGCTAACTACACCAGGTAA
Protein
MRNILNKKNILFILFFVVILLLFLKTFKDVTIQEQFLNGYKIITENDEIKNIEVVTTPQATRKQETTEPNEASKLKYILQWTSPRGVPFAYMGKGQEGFIQRKCPHTNCFVTADRNLLGDYTKFDVIAFAGPDVVRMSERALPEKRSPHQKYAFATIESSDNYPVCSNRFDGYFNWTWTFRLDSEVRWGYFNVKDKNENVIGPNKIMHWMKIEDMEPVSEDFKIQLKSKSKAAAWFVSNCYTRSKREDFANELQVELKKHNLELDIYGRCGNLKCSRDTEEACDEMIREKYYFYLSFENSFGEDYVTEKLLHALEFDAVPVVYGGANYTR

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
EMBL
ODYU01003079    SOQ41387.1    NWSH01002952    PCG67232.1    KQ459603    KPI93062.1    + More
JTDY01006679    KOB65782.1    JTDY01012912    KOB52215.1    JTDY01009552    KOB63349.1    KQ461137    KPJ08813.1    JTDY01010816    KOB57987.1    RSAL01000031    RVE51642.1    AGBW02008995    OWR51946.1    RVE51643.1    ODYU01013118    SOQ59805.1    PCG67231.1    RVE51641.1    JTDY01005492    KOB66945.1    RSAL01000016    RVE53056.1    RSAL01000116    RVE46859.1    KOB65783.1    KQ460627    KPJ13477.1    ODYU01003471    SOQ42305.1    RSAL01000164    RVE45329.1    AGBW02011221    OWR47017.1    PCG67233.1    KQ459594    KPI96064.1    BABH01022242    KPJ13478.1    AGBW02010417    OWR48543.1    JTDY01001793    KOB72859.1    ODYU01001405    SOQ37538.1    KQ461108    KPJ09317.1    KQ459585    KPI98210.1    KZ149916    PZC77942.1    OWR48542.1    NWSH01004327    PCG65224.1    JTDY01005919    KOB66482.1    JTDY01001718    KOB73086.1    NWSH01003936    PCG65653.1    BABH01022215    ODYU01001860    SOQ38649.1    NWSH01003715    PCG65893.1    KZ150145    PZC72905.1    AGBW02010111    OWR49153.1    JTDY01003799    KOB68987.1    PZC77933.1    AGBW02008491    OWR53234.1    ODYU01008712    SOQ52539.1    RVE53050.1    RVE53051.1    NWSH01000372    PCG76878.1    ODYU01000952    SOQ36485.1    RVE53053.1    NWSH01004476    PCG65061.1    RVE53052.1    PZC77936.1    ODYU01003968    SOQ43373.1    KQ414617    KOC68244.1    KQ761844    OAD56586.1    PZC77935.1    AGBW02013437    OWR43437.1    GL888602    EGI59184.1    GDIQ01093775    JAL57951.1    HACA01011490    CDW28851.1    OUUW01000003    SPP78615.1    KQ971354    EFA05856.1    GDIP01038939    JAM64776.1    GDIQ01217631    JAK34094.1    GDIP01002675    JAN01041.1    GDIQ01114275    JAL37451.1    LRGB01000868    KZS15541.1    GL732869    EFX64162.1    GDIQ01076840    JAN17897.1    GDIQ01012846    JAN81891.1    ATLV01026273    KE525409    KFB52971.1    GBYB01010645    JAG80412.1    KFB52972.1    CH379063    EDY72430.1    GDIQ01002877    JAN91860.1    AXCN02002248    KQ981250    KYN44218.1    CH916370    EDW00427.1    KQ978679    KYN29320.1    KQ978379    KYM94539.1    AJVK01015359    AJVK01015360    GL442820    EFN62934.1    KQ458537    KPJ05835.1    APCN01001363    AXCM01001982    ADTU01005498    ADTU01005499    ADTU01005500   
Pfam
PF17039   Glyco_tran_10_N        + More
PF00852   Glyco_transf_10
Interpro
IPR038577   GT10-like_sf        + More
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       
IPR029068   Glyas_Bleomycin-R_OHBP_Dase       
IPR037523   VOC       
SUPFAM
SSF54593   SSF54593       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
330
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.28431
Exp number, first 60 AAs:
19.2802
Total prob of N-in:
0.87275
POSSIBLE N-term signal
sequence
inside
1  -  8
TMhelix
9  -  27
outside
28  -  330
 
 

Population Genetic Test Statistics

Pi
115.192735
Theta
111.123231
Tajima's D
-0.258265
CLR
47.587072
CSRT
0.305934703264837
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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