SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10448
Annotation
Alpha-(1?3)-fucosyltransferase_C_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.769
 

Sequence

CDS
ATGCTTGTATCTAAGAGTCTTTGGTGCATAAAACCAAATGAGGCATCGAAATTAAAATACATACTTCAGTGGACTTCTCCACGGGGAGTACCATTTGCTTACATGGGAAAAGGACAGGAAGGTTTTATACAAAGAAAATGCCCACACACCAATTGTTTTGTGACCGCGGACCGCAATTTACTCGGTGATTATACAAAATTCGACGTGATAGCTTTCGCAGGACCTGACGTGGTACGCATGTCGGAAAGAGCTTTGCCTGAGAAGAGGTCACCGCATCAAAAATACGCATTCGCTACAATAGAATCCTCGGACAATTACCCAGTTTGCTCAAATCGATTTGACGGTTACTTTAATTGGACATGGACATTCCGACTGGATTCGGAAGTCCGATGGGGATATTTCAATGTCAAAGATAAAAACGAAAACGTTATTGGACCGAATAAAATAATGCACTGGATGAAAATTGAAGACATGGAACCGGTCAGCGAAGATTTCAAAATACAGTTAAAGTCTAAGTCTAAGGCCGCAGCGTGGTTTGTGTCAAATTGTTACACAAGAAGCAAAAGGGAAGATTTCGCTAATGAACTTCAAGTTGAACTGAAAAAGCACAATTTAGAACTAGATATCTATGGCAGATGTGGAAACCTTAAATGTTCCCGGGATACAGAAGAGGCATGTGATGAAATGATCAGAGAAAAATATTACTTTTACTTGTCGTTTGAAAACTCATTTGGTGAAGATTATGTCACAGAAAAATTATTACATGCCTTAGAATTCGACGCTGTTCCTGTAGTGTATGGCGGTGCTAACTACACCAGGTAA
Protein
MLVSKSLWCIKPNEASKLKYILQWTSPRGVPFAYMGKGQEGFIQRKCPHTNCFVTADRNLLGDYTKFDVIAFAGPDVVRMSERALPEKRSPHQKYAFATIESSDNYPVCSNRFDGYFNWTWTFRLDSEVRWGYFNVKDKNENVIGPNKIMHWMKIEDMEPVSEDFKIQLKSKSKAAAWFVSNCYTRSKREDFANELQVELKKHNLELDIYGRCGNLKCSRDTEEACDEMIREKYYFYLSFENSFGEDYVTEKLLHALEFDAVPVVYGGANYTR

Summary

Similarity
Belongs to the glycosyltransferase 10 family.
EMBL
ODYU01003079    SOQ41387.1    NWSH01002952    PCG67232.1    KQ459603    KPI93062.1    + More
JTDY01006679    KOB65782.1    JTDY01012912    KOB52215.1    KQ461137    KPJ08813.1    JTDY01009552    KOB63349.1    JTDY01010816    KOB57987.1    RSAL01000031    RVE51642.1    AGBW02008995    OWR51946.1    RVE51643.1    ODYU01013118    SOQ59805.1    PCG67231.1    RVE51641.1    JTDY01005492    KOB66945.1    RSAL01000016    RVE53056.1    RSAL01000116    RVE46859.1    KQ460627    KPJ13477.1    KOB65783.1    ODYU01003471    SOQ42305.1    RSAL01000164    RVE45329.1    AGBW02011221    OWR47017.1    PCG67233.1    KQ459594    KPI96064.1    BABH01022242    RVE51640.1    KPJ13478.1    AGBW02010417    OWR48543.1    KQ459585    KPI98210.1    ODYU01001405    SOQ37538.1    KZ149916    PZC77942.1    KQ461108    KPJ09317.1    OWR48542.1    NWSH01004327    PCG65224.1    JTDY01001793    KOB72859.1    JTDY01005919    KOB66482.1    JTDY01001718    KOB73086.1    BABH01022215    NWSH01003936    PCG65653.1    ODYU01001860    SOQ38649.1    KZ150145    PZC72905.1    NWSH01003715    PCG65893.1    AGBW02010111    OWR49153.1    PZC77933.1    JTDY01003799    KOB68987.1    AGBW02008491    OWR53234.1    ODYU01008712    SOQ52539.1    RVE53050.1    RVE53051.1    NWSH01000372    PCG76878.1    ODYU01000952    SOQ36485.1    RVE53053.1    NWSH01004476    PCG65061.1    RVE53052.1    PZC77936.1    PCG65062.1    ODYU01003968    SOQ43373.1    PZC77935.1    KQ414617    KOC68244.1    KQ761844    OAD56586.1    GL888602    EGI59184.1    AGBW02013437    OWR43437.1    HACA01011490    CDW28851.1    GDIQ01093775    JAL57951.1    OUUW01000003    SPP78615.1    GDIP01038939    JAM64776.1    GDIP01002675    JAN01041.1    GDIQ01217631    JAK34094.1    GL732869    EFX64162.1    GBYB01010645    JAG80412.1    LRGB01000868    KZS15541.1    GFDF01001507    JAV12577.1    GDIQ01114275    JAL37451.1    AJWK01014233    ATLV01026273    KE525409    KFB52971.1    KQ971354    EFA05856.1    GDIQ01076840    JAN17897.1    GDIQ01012846    JAN81891.1    KFB52972.1    CH379063    EDY72430.1    GDIQ01002877    JAN91860.1    KQ981250    KYN44218.1    KQ978379    KYM94539.1    KQ458537    KPJ05835.1    KQ978679    KYN29320.1    CH916370    EDW00427.1    AJVK01015359    AJVK01015360    EFA05857.2    APCN01001363    ADTU01005498    ADTU01005499    ADTU01005500    CH479194    EDW27021.1    GDIQ01083834    JAN10903.1    KZ288185    PBC34965.1    KQ434977    KZC12838.1   
Pfam
PF17039   Glyco_tran_10_N        + More
PF00852   Glyco_transf_10
Interpro
IPR038577   GT10-like_sf        + More
IPR001503   Glyco_trans_10       
IPR031481   Glyco_tran_10_N       
IPR029068   Glyas_Bleomycin-R_OHBP_Dase       
IPR037523   VOC       
SUPFAM
SSF54593   SSF54593       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
273
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0039
Exp number, first 60 AAs:
0.00095
Total prob of N-in:
0.02513
outside
1  -  273
 
 

Population Genetic Test Statistics

Pi
122.594257
Theta
139.176857
Tajima's D
-0.383083
CLR
14.685905
CSRT
0.266986650667467
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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