Gene

KWMTBOMO10444

Annotation

PREDICTED:_uncharacterized_protein_LOC106717522_[Papilio_machaon]

Location

Bomo_Chr17(+):11130499-11131863      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.335 Extracellular   Reliability : 1.135 Nuclear   Reliability : 1.252

CDS

ATGTCATCTGAAGAAATTATATCTTCCACTTCAGAGCAAGAAGCAGCAACTAAATTGCGTGAATCATTTTTAAGATCAATAAGAGAACTAAGTGGACTTAAGTGTACAATTCTGACATATGAAAAAAGTTCTTTAAAAGCCAAATTCAGCAGTTGGAAACCTGATGGTTCGGAGATATTAGTACACGGCTTGGAAACACCAGCATGTGTTGTGATGGACTCAGCTTTATTAAGGACACCTGATCTTTTAGCGATACAATTTGAAAACCACTTGGATTTACCATGA

Protein

MSSEEIISSTSEQEAATKLRESFLRSIRELSGLKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDSALLRTPDLLAIQFENHLDLP

Subunit

Component of the Mediator complex.

Uniprot

A0A194PPJ4   A0A194QTL4   A0A2H1VX67   A0A212ER89   A0A2A4ITW0   A0A3S2LDX6   + More
S4P966   A0A0L7LG62   A0A1S3DNJ1   A0A1S3DQ70   V4C4W0   A0A0D6LJI9   A0A0V0GCD1   A0A069DVR8   A0A224XPG9   T1ID94   A0A183V1M3   A0A0M3I6H9   A0A0B2VHH9   J9KEG5   A0A0D8Y893   A0A1B6J0R8   A0A0A9Y7W6   K7HPS4   A0A3B3SDR1   A0A0B6ZHH3   A0A0R3RUX6   K7HPS5   A0A2L2YFL7   A0A0N5D0K8   A0A3P6SKW4   A0A0K8RUQ9   A0A183GXZ3   A0A1S0U695   A0A1W7RH70   A0A044SHC5   A0A182EHY0   A0A1I7VQF4   A0A0M3JXJ5   V8NPD7   A0A1B6DGM1   C1C464   B5X638   A0A060VVA6   A0A2D4L9H3   A0A0N5AVS6   H3AAC2   E2BXS7   H3FNB7   A0A1L8F860   K7JGC5   A0A2P8XFA6   F6RQK0   A0A026X1M2   C3ZQV6   A0A3B4DFL8  

Pubmed

26354079    22118469    23622113    26227816    23254933    26334808    + More
26856411    25401762    26823975    29240929    26561354    25727380    26358130    22919073    25217238    24297900    20433749    24755649    9215903    20798317    18806794    27762356    20075255    29403074    20431018    24508170    30249741    18563158   

EMBL

KQ459603    KPI93055.1    KQ461137    KPJ08807.1    ODYU01004994    SOQ45429.1    + More
AGBW02013074    OWR44012.1    NWSH01006994    NWSH01003575    PCG63161.1    PCG66094.1    RSAL01000031    RVE51647.1    GAIX01005651    JAA86909.1    JTDY01001253    KOB74395.1    KB201441    ESO96619.1    KE125222    EPB70121.1    GECL01000608    JAP05516.1    GBGD01003505    JAC85384.1    GFTR01002041    JAW14385.1    ACPB03002945    UYWY01022364    VDM45964.1    JPKZ01001631    KHN80932.1    ABLF02023675    KN716156    KJH53078.1    GECU01017007    GECU01014935    GECU01006273    JAS90699.1    JAS92771.1    JAT01434.1    GBHO01014457    GBRD01003849    GDHC01011767    JAG29147.1    JAG61972.1    JAQ06862.1    HACG01021083    CEK67948.1    IAAA01025016    LAA06918.1    UYYF01004407    VDN03665.1    UYRX01000013    VDK68730.1    GBKC01001419    JAG44651.1    UZAJ01000025    VDO24543.1    JH712076    EFO25647.2    GDAY02000935    JAV50492.1    CMVM020000075    UYRW01002868    VDK87023.1    UYRR01031207    VDK47612.1    AZIM01002712    ETE63503.1    GEDC01012459    JAS24839.1    BT081643    ACO51774.1    BT046507    ACI66308.1    FR904273    CDQ56924.1    IACL01116853    LAB17580.1    AFYH01132804    GL451314    EFN79484.1    CM004480    OCT67783.1    PYGN01002351    PSN30687.1    AAMC01145543    KK107061    QOIP01000014    EZA61289.1    RLU14731.1    GG666662    EEN45152.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000218220    UP000283053    UP000037510    + More
UP000079169    UP000030746    UP000015103    UP000050794    UP000267007    UP000036681    UP000031036    UP000007819    UP000053766    UP000005237    UP000261540    UP000050640    UP000046394    UP000276776    UP000277928    UP000050787    UP000024404    UP000077448    UP000271087    UP000095285    UP000036680    UP000087266    UP000193380    UP000046393    UP000008672    UP000008237    UP000005239    UP000186698    UP000002358    UP000245037    UP000008143    UP000053097    UP000279307    UP000001554    UP000261440   

Pfam

PF11095   Gemin7        + More
PF12901   SUZ-C
PF00276   Ribosomal_L23
PF03939   Ribosomal_L23eN

Interpro

IPR020338   SMN_gemin7        + More
IPR037212   Med7/Med21-like       
IPR024642   SUZ-C       
IPR005633   Ribosomal_L23/L25_N       
IPR013025   Ribosomal_L25/23       
IPR012678   Ribosomal_L23/L15e_core_dom_sf       
IPR012677   Nucleotide-bd_a/b_plait_sf       

SUPFAM

SSF140718   SSF140718        + More
SSF54189   SSF54189       

Gene 3D

3.30.70.330    

CDD

cd11677  Gemin7

ProteinModelPortal

A0A194PPJ4   A0A194QTL4   A0A2H1VX67   A0A212ER89   A0A2A4ITW0   A0A3S2LDX6   + More
S4P966   A0A0L7LG62   A0A1S3DNJ1   A0A1S3DQ70   V4C4W0   A0A0D6LJI9   A0A0V0GCD1   A0A069DVR8   A0A224XPG9   T1ID94   A0A183V1M3   A0A0M3I6H9   A0A0B2VHH9   J9KEG5   A0A0D8Y893   A0A1B6J0R8   A0A0A9Y7W6   K7HPS4   A0A3B3SDR1   A0A0B6ZHH3   A0A0R3RUX6   K7HPS5   A0A2L2YFL7   A0A0N5D0K8   A0A3P6SKW4   A0A0K8RUQ9   A0A183GXZ3   A0A1S0U695   A0A1W7RH70   A0A044SHC5   A0A182EHY0   A0A1I7VQF4   A0A0M3JXJ5   V8NPD7   A0A1B6DGM1   C1C464   B5X638   A0A060VVA6   A0A2D4L9H3   A0A0N5AVS6   H3AAC2   E2BXS7   H3FNB7   A0A1L8F860   K7JGC5   A0A2P8XFA6   F6RQK0   A0A026X1M2   C3ZQV6   A0A3B4DFL8  

PDB

1Y96     E-value=0.0221759,     Score=81

KEGG

101745008    no KO assigned | (RefSeq) uncharacterized LOC101745008

GO

GO:0034719   GO:0016592   GO:0006412   GO:0003735   GO:0005840   GO:0016021  

PANTHER

PTHR14679  

Subcellular location

Nucleus  

Length:

94

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00265

Exp number, first 60 AAs:

0.00034

Total prob of N-in:

0.17700

outside

1  -  94

 

 

Pi

234.358101

Theta

180.475665

Tajima's D

0.814509

CLR

0

CSRT

0.607819609019549

Interpretation

Uncertain