Silkworm Genome Informatics Database

Gene

KWMTBOMO10443 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007090

Annotation

putative_alternative_splicing_type_3_and_[Danaus_plexippus]

Location

Bomo_Chr17(+):11117999-11125768 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.933

CDS

ATGGCGGTGCTAGCGGCAGCACAACTCCTAGATGAATTGATGGGCAGGCACCGGAACACCGATCCCAACGAAAAAATTAAAAAGCCTAATTGGGAAGATCCTGAGTACTGCAAATACTACATGGTAAAGTTCTGTCCGCATGATCTGTTCGTTAATACTAGAGCTGATCTTGGTGCTTGTCCTAAAGTCCACGATGAAGAAGTCAAAGAGCTTTTTGAGAAAGCCGACCCATCGTATAAGAAGTCTCAGTATGTCGAAGAGTTTCTACGGTTCTGTAAACATATGATTAATGATGTAGAAAGGAAAATACAAAAAGGAAAACAAAGATTGGATCTAATGAACTCAAAACCAGAGGGCCCACCAATGACTCAAGCACAGACTGAGAAGAATCAGGAACAGGTTTCGTTGCTGTCTGAAAAAATTACGGGCTTGGTACAAGAAGCTGAAGAAGCGGGTATAAGAGGAGATGTAGAGCAAGCCCAGGGTTTGATGAAGCTTTGTGACAGGCTCAAGGAAGAAAAAGAACAGCTGCTTAAACAACAAGAAAATAGCCATTGGTCTATGACAGCTGAACTAGCAGCTGCTCAGGAGAAACAAATGGAAGTCTGCCCTGTATGCGGAGCCTTTCTTATTGTTGGCGACGCTCAACAGAGAATCGATGATCACTTGTCTGGGAAACAGCATGTTGGATACTTCAAACTTCGCCAAGCTTACGAAGACATGACCGAAGCTCGTGAGAAAGAACAACAAGAAAAAGAGAAGAGGCGTCGTGAAGAGAGGGAAAGAGAAAGAAACACTCGTTCTGGAGGACTCGGATCCGATCGCCGTGATCGAGAACGCATGGAACGCGATCGAGAGCGGGAGCGAGACCGCGGCGACCAACGTAGTGACCAACGGGGAGAACGCGGTGAACAACGCGGAGGAGAACGCGGCGATCGCGTCGAACGAAGCGAGAGAGGCGAGAGGGAACGGGACAGAGAACGTGAGAGGGACCGACATCGCGATCGATCAAGTCGAGACGAGCGAGGCGGCCGCCACGAAGAGCGGGATCGGGACCGTGAACGTGATCGCGACCGGGAACGAAAACATCGTAAAGAAAGAAGGTCGTCTCACGAGCGCTCCCGTCGTCGATCTCGAGATCGCCACTAG

Protein

MAVLAAAQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQAQTEKNQEQVSLLSEKITGLVQEAEEAGIRGDVEQAQGLMKLCDRLKEEKEQLLKQQENSHWSMTAELAAAQEKQMEVCPVCGAFLIVGDAQQRIDDHLSGKQHVGYFKLRQAYEDMTEAREKEQQEKEKRRREERERERNTRSGGLGSDRRDRERMERDRERERDRGDQRSDQRGERGEQRGGERGDRVERSERGERERDRERERDRHRDRSSRDERGGRHEERDRDRERDRDRERKHRKERRSSHERSRRRSRDRH

Uniprot

NA

ProteinModelPortal

NA

PDB

5ZWN E-value=5.17556e-17, Score=214

KEGG

101744676 no KO assigned | (RefSeq) luc7-like protein 3

GO

GO:0003729 GO:0005685 GO:0006376 GO:0005524 GO:0006468 GO:0004674 GO:0006418 GO:0003723 GO:0046872 GO:0003824

Length:

382

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00897

outside

1 - 382

Pi

258.855187

Theta

201.568774

Tajima's D

0.670816

CLR

0.007758

CSRT

0.561821908904555

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics