Gene

KWMTBOMO10440

Pre Gene Modal

BGIBMGA007089

Annotation

PREDICTED:_zinc_finger_protein_569-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr17(+):11089679-11104993      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.16

CDS

ATGAACCCAGAACACCACAATATTACTAGTGGTGGTCAGCCATCGGGAAGTACAGAGTCTCAAAATCAACGGACAGCTCAGCAACAGCAGCAGACTAATTTAACACCCACAACCTCTGCTACTGACCTCCGAGTGAACTCTGCTGCTGTAAATGTCGCTTTGTCTAGTGTTGCGAAGTACTGGGTGTTTACAAATCTCTTCCCTGGTCCAATACCACAAGTATCAGTGTATGGACTACCAACAGGTACAAGAATAGAAAACGGGAAAGCAGTACAGGATATTGGTCAAACACATACTGGTATACTTAATGGTGATCCTAATATCATACTTGGTCATCATGGAGGTCAGGCACAGGTTACAGTGTCTGCGTCTGGAACACAGCAGATTCCAGTTTCACAAATCCTTTCAACACAATCTGGGCAAACTCATGAAACGATGGTGGGCCACGCTCAGGCACAAGAGCTTGGAGGACAACAGGCGACAGGTAGTGCCGGAGCTGGTCAGGCCACACACCAGCAGGTAGCCAATAGTCGGGTCGAGTTTGTACAACACCATAATATCGATATGACTCACCACACACAACAGCATTTGTTGCAACAACAGTTAATGGCGGCTCGACCAGACCATTCTAATCAACAGATACAACTAACTGTCAGTGAAGATGGTATAGTGACAGTGGTAGAGCCGGGAGCAGGTAAAATTGTTGAAAAGGAAGAGCTTCATGAAGCTATCAAACTACCCAATGATCAAACACTCACTGTACATCAACTACAGCAAATCGTAGGACAACAGGTAATAGACAGCGTGGTTCGCATAGAACAAGCCACGGGAGAACCAGCCAATATTTTAGTGACTCACAATGCAGATGGCACCACGTCCATAGAAGCAAGTGCTGCTGAATCGCTCATCGTGAAAGACGAAAAAAATTCAAAGATTGAAACTGCTCAGTTTGCCATACCTACAGACATTAAAGATATCAAAGGCATTGATTTGAAGGAAAATTTACAGACTGTTGGGGCAATGGGAATGGAAGGGGCCGTCGTCAAGATATCAGCTGGAGCTACCGATCATGACATGCATGCTATGTATAAAGTTAACGTGGAAGATCTCTCACAACTACTAGCATATCATGAAGTCTTTGGGAAATTGAATTCTGATGGACAACCACAACAACAACCCAAGGTTATAACGGAAATAGAAGTTGAGGTAGAAGCAGGTACGAGTGCAGCGATAACTGAACAAGATTCGTCACCTGGACACCATTCTTGTGATATTTGTGGGAAAATATTCCAGTTTAGATATCAACTCATTGTACACAGACGATACCATGGCGAAAGCAAACCTTTTGCATGTTTAGTTTGTGGAGTAGCGTTTGCTAACCCTTTAGAATTATCAAGACACGGAAAATGTCATCTTGCCGGCGACCCCGCGGAACGACACGCCAAAAGAATGACGGCGGACAAGCCATATGTTTGCACAACTTGCCATAAAACCTTTTCGCGAAAGGAACATCTGGATAACCACGTACGAAGTCATACTGGAGAAACACCTTACCGATGTGAATTCTGTGCAAAGACATTCACTAGAAAAGAACACATGGTTAATCACGTCAGGAAACACACCGGCGAAACGCCGCATCGCTGCGACATCTGCAAGAAAAGTTTCACGAGGAAAGAACATTTCATGAACCATGTCATGTGGCACACAGGTGAAACTCCACATCGTTGCGACTTTTGTTCGAAAACATTTACTCGTAAGGAGCATCTTCTCAATCATGTAAGACAACATACTGGAGAATCTCCTCATCGGTGTAACTTCTGCTCCAAATCGTTCACGAGAAGAGAACATTTAGTGAACCACGTGAGGCAACATACCGGCGAAACACCATTCCAGTGTGGATACTGTCCTAAAGCATTCACAAGAAAGGATCATCTCGTAAATCACGTTCGACAACACACAGGGGAATCGCCACACAAGTGCTCTTTCTGCACCAAGTCGTTCACAAGAAAAGAACATCTAACGAACCACGTGCGTCAACACACAGGCGAGTCCCCGCATCGATGTACTTACTGCGCCAAGTCTTTTACAAGGAAAGAACATCTTACTAATCATATCAGACAGCACACCGGCGAAACTCCACACAAGTGTACCTACTGTCCGCGTGCCTTCGCGCGTAAGGAACATCTGAACAATCACATTCGACAACACACCGGCGTCACTCCGCACGCCTGTACTTACTGCAGCAAGACATTCACAAGAAAGGAGCACCTCGTTAACCATGTTCGGCAACACACTGGCGAGACACCATTTAAATGTGGATTTTGCACGAAATCGTTCTCTAGAAAAGAACATTTAACAAATCACATCCATCTACACACTGGAGAAACGCCACACAAATGTCCTTTCTGTACAAAGACGTTTTCGAGAAAAGAACACTTGACCAATCATGTCAGAATACATACTGGTGAATCGCCACATCGTTGTGAATTTTGTCAGAAAACATTTACTCGCAAAGAGCATCTCACCAACCATCTAAAACAGCACACTGGAGACACAGCGCATGCATGTAAAGTTTGTTCCAAGCCTTTTACGAGAAAGGAACACCTTGTCACACACATGAGGTAA

Protein

MNPEHHNITSGGQPSGSTESQNQRTAQQQQQTNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDIGQTHTGILNGDPNIILGHHGGQAQVTVSASGTQQIPVSQILSTQSGQTHETMVGHAQAQELGGQQATGSAGAGQATHQQVANSRVEFVQHHNIDMTHHTQQHLLQQQLMAARPDHSNQQIQLTVSEDGIVTVVEPGAGKIVEKEELHEAIKLPNDQTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNADGTTSIEASAAESLIVKDEKNSKIETAQFAIPTDIKDIKGIDLKENLQTVGAMGMEGAVVKISAGATDHDMHAMYKVNVEDLSQLLAYHEVFGKLNSDGQPQQQPKVITEIEVEVEAGTSAAITEQDSSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFACLVCGVAFANPLELSRHGKCHLAGDPAERHAKRMTADKPYVCTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHACTYCSKTFTRKEHLVNHVRQHTGETPFKCGFCTKSFSRKEHLTNHIHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTAHACKVCSKPFTRKEHLVTHMR

Uniprot

H9JC44   A0A2A4IYQ4   A0A1E1WS31   A0A2A4IZV4   A0A1E1W290   A0A2A4IZN7   + More
A0A1E1WV67   A0A1E1W8B5   A0A212ERB0   A0A194PIA9   A0A194QU13   A0A2H1X2Y2   A0A1Y1MEC5   D6WYI1   A0A0T6AYN7   A0A1W4XGI0   A0A1W4XS30   E0VFL0   V5I9P9   A0A067RK94   A0A0C9Q4T0   F4W5X7   A0A158P2W0   A0A151XH71   A0A3L8DFL0   V9IF05   A0A154PIG5   A0A0L7R540   V9IEJ4   A0A232F5M4   N6U8B6   A0A0N0BKL8   A0A310SD71   K7IZH9   A0A0C9RPJ2   A0A1B0CTZ0   A0A195CY15   A0A195DFJ8   A0A2P8XG51   A0A088AQW3   A0A0C9RLC9  

Pubmed

19121390    22118469    26354079    28004739    18362917    19820115    + More
20566863    24845553    21719571    21347285    30249741    28648823    23537049    20075255    29403074   

EMBL

BABH01014857    BABH01014858    NWSH01004552    PCG64955.1    GDQN01001219    JAT89835.1    + More
PCG64958.1    GDQN01009971    JAT81083.1    PCG64956.1    GDQN01000172    JAT90882.1    GDQN01007855    JAT83199.1    AGBW02013074    OWR44015.1    KQ459603    KPI93052.1    KQ461137    KPJ08804.1    ODYU01012995    SOQ59586.1    GEZM01033751    GEZM01033750    JAV84179.1    KQ971362    EFA08986.1    LJIG01022489    KRT80303.1    DS235115    EEB12166.1    GALX01002555    JAB65911.1    KK852421    KDR24286.1    GBYB01009088    JAG78855.1    GL887695    EGI70453.1    ADTU01007511    ADTU01007512    KQ982130    KYQ59754.1    QOIP01000009    RLU18953.1    JR040253    AEY59051.1    KQ434924    KZC11602.1    KQ414657    KOC65866.1    JR040254    AEY59052.1    NNAY01000947    OXU25779.1    APGK01035666    KB740928    ENN77910.1    KQ435698    KOX80761.1    KQ762903    OAD55274.1    GBYB01009086    JAG78853.1    AJWK01028174    AJWK01028175    KQ977185    KYN05044.1    KQ980903    KYN11658.1    PYGN01002258    PSN30986.1    GBYB01009085    JAG78852.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000007266    + More
UP000192223    UP000009046    UP000027135    UP000007755    UP000005205    UP000075809    UP000279307    UP000076502    UP000053825    UP000215335    UP000019118    UP000053105    UP000002358    UP000092461    UP000078542    UP000078492    UP000245037    UP000005203   

PRIDE

H9JC44   

Pfam

PF00096   zf-C2H2        + More
PF01248   Ribosomal_L7Ae

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR018492   Ribosomal_L7Ae/L8/Nhp2       
IPR002415   H/ACA_rnp_Nhp2_euk       
IPR004037   Ribosomal_L7Ae_CS       
IPR029064   L30e-like       
IPR004038   Ribosomal_L7Ae/L30e/S12e/Gad45       

SUPFAM

SSF57667   SSF57667        + More
SSF55315   SSF55315       

Gene 3D

3.30.1330.30    

ProteinModelPortal

H9JC44   A0A2A4IYQ4   A0A1E1WS31   A0A2A4IZV4   A0A1E1W290   A0A2A4IZN7   + More
A0A1E1WV67   A0A1E1W8B5   A0A212ERB0   A0A194PIA9   A0A194QU13   A0A2H1X2Y2   A0A1Y1MEC5   D6WYI1   A0A0T6AYN7   A0A1W4XGI0   A0A1W4XS30   E0VFL0   V5I9P9   A0A067RK94   A0A0C9Q4T0   F4W5X7   A0A158P2W0   A0A151XH71   A0A3L8DFL0   V9IF05   A0A154PIG5   A0A0L7R540   V9IEJ4   A0A232F5M4   N6U8B6   A0A0N0BKL8   A0A310SD71   K7IZH9   A0A0C9RPJ2   A0A1B0CTZ0   A0A195CY15   A0A195DFJ8   A0A2P8XG51   A0A088AQW3   A0A0C9RLC9  

PDB

5V3M     E-value=5.77101e-61,     Score=597

KEGG

101744101    no KO assigned | (RefSeq) zinc finger protein 569-like

GO

GO:0003676   GO:0003723   GO:1990904   GO:0005730   GO:0042254   GO:0046872   GO:0015074   GO:0005524   GO:0006468   GO:0004674   GO:0006418   GO:0003824  

Length:

874

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2181

Exp number, first 60 AAs:

0.12989

Total prob of N-in:

0.01037

outside

1  -  874

 

 

Pi

223.419146

Theta

179.226052

Tajima's D

0.219735

CLR

0.90478

CSRT

0.431528423578821

Interpretation

Uncertain