SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10437  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007087
Annotation
uncharacterized_protein_LOC778505_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.827
 

Sequence

CDS
ATGGCCATCAGCAGGTTGTCTATCATCAAGTTTCTGGAGCTGGCACTTACGTGTTCGTGCGTGGCTCTCCACTACCACAGTTACAATGCAGATGCGGATATCGGCATGCTCGTCACCGGTACCTTTGTCGGGTACCTCATCATATTCGCTGGTGCGGCCGCGGGCTACATAATGCAGACTCCTTCACACAAACGGATCGACATCTTCTATTCGCTGGTCGGTGTTGCCTTGTTCGTCGCTAGCGGTGCCATTATTATTGACAGATTCCAACATTATGGTAAGAGCGAGATCAAAGACAAGAACTTGGCTAAGGCCTCGTTGGCCATCATCAATGGCGCTATCTTACTTGTTGATGCTGTCCTCACGCAACGAGGAGGCTAA
Protein
MAISRLSIIKFLELALTCSCVALHYHSYNADADIGMLVTGTFVGYLIIFAGAAAGYIMQTPSHKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQRGG

Summary

EMBL
DQ985598    ABJ97187.1    AGBW02010343    OWR48679.1    GAIX01006905    JAA85655.1    + More
GDQN01008612    JAT82442.1    KQ459603    KPI93049.1    JTDY01002190    KOB71913.1    NWSH01007415    NWSH01003836    PCG62980.1    PCG65777.1    RSAL01000031    RVE51653.1    AK403162    BAM19598.1    GEZM01003645    JAV96660.1    GALA01000576    JAA94276.1    QOIP01000008    RLU19388.1    GALA01000580    JAA94272.1    ADTU01002122    BT127413    AEE62375.1    KQ971361    EFA08752.1    EZ114936    ACU30989.1    GL888424    EGI61094.1    GFDL01005946    JAV29099.1    DS232556    EDS43423.1    KB632155    ERL89188.1    GAPW01006023    GAPW01006022    GAPW01006020    JAC07575.1    GAPW01006025    GAPW01006024    GAPW01006021    JAC07573.1    CH477672    EAT37454.1    GANO01004816    JAB55055.1    CH940651    EDW65968.1    CH964239    EDW82627.1    CH916370    EDV99802.1    CH933810    EDW07418.1    AAAB01008811    EAA04904.4    APCN01004748    CH379065    EAL31476.1    CH479194    EDW27126.1    EU934406    ACI30184.1    CM000366    EDX18500.1    CM000162    EDX03058.1    CH902640    EDV38397.1    AE014298    KX531666    AAF50865.1    ANY27476.1    GGFM01000578    MBW21329.1    GGFK01004630    MBW37951.1    ADMH02001869    ETN60730.1    CVRI01000063    CRL04714.1    CH954180    EDV47581.1    DS235061    EEB11163.1    GGFK01008088    MBW41409.1    GGFJ01010697    MBW59838.1    EU934425    ACI30203.1    AXCN02002024    GAMD01003049    JAA98541.1    OUUW01000003    SPP78051.1    EDS43424.1    EAA04905.4    BT023637    AAY85037.1    JRES01001642    KNC21259.1    EAT37455.1    CCAG010020168    JXJN01001851    KK853177    KDR10266.1    AJWK01009788    AJWK01026568    GDHF01015915    JAI36399.1    KK107536    EZA49205.1    AJVK01005529    KQ981805    KYN35574.1    GL441295    EFN64937.1    GGMR01006354    MBY18973.1    KQ978801    KYN28323.1    ATLV01014663    KE524978    KFB39348.1    GL449798    EFN81983.1    NNAY01000947    OXU25786.1    GFDF01010925    JAV03159.1   
Interpro
IPR038976   Ssk       

Ontologies

Topology

Length:
126
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
65.66349
Exp number, first 60 AAs:
32.25023
Total prob of N-in:
0.75549
POSSIBLE N-term signal
sequence
outside
1  -  33
TMhelix
34  -  56
inside
57  -  67
TMhelix
68  -  90
outside
91  -  104
TMhelix
105  -  122
inside
123  -  126
 
 

Population Genetic Test Statistics

Pi
192.707424
Theta
162.128524
Tajima's D
0.43273
CLR
0
CSRT
0.495125243737813
Interpretation
Uncertain
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