SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10436
Pre Gene Modal
BGIBMGA007086
Annotation
Uncharacterized_protein_OBRU01_16656_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.391 PlasmaMembrane   Reliability : 1.883
 

Sequence

CDS
ATGATTTTCGCGCCTTTAGACCTCGTTCAAGATATGTATTTTGGATTGCTCGGAGCCACATTATTTTCTACCAGCGGAGGTCTTGTCCTCTCAGCTAGAGTTCGAGGTGCCACATACCCGAGGACTGGTGACCACAACGCGGCCCTACTCGCTGGATCGTTGGCTGTCGTGAACGCATTTATAATGATTTTCGATCTAACCTTAGCTTATATGGACTCGGAGGAATTCGATGATGAGGCCAGCGTATGA
Protein
MIFAPLDLVQDMYFGLLGATLFSTSGGLVLSARVRGATYPRTGDHNAALLAGSLAVVNAFIMIFDLTLAYMDSEEFDDEASV

Summary

Interpro
IPR038976   Ssk       

Ontologies

Topology

Length:
82
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.67639
Exp number, first 60 AAs:
35.32779
Total prob of N-in:
0.04506
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  34
inside
35  -  46
TMhelix
47  -  69
outside
70  -  82
 
 

Population Genetic Test Statistics

Pi
306.997233
Theta
207.196076
Tajima's D
1.516359
CLR
0
CSRT
0.786560671966402
Interpretation
Uncertain
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