Silkworm Genome Informatics Database

Gene

KWMTBOMO10434

Pre Gene Modal

BGIBMGA007015

Annotation

cuticular_protein_RR-1_motif_8_precursor_[Bombyx_mori]

Location

Bomo_Chr17(-):10870930-10873998 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.355

CDS

ATGTCCGCTCTTAAGATTGTGTCAGCCCTTGCCCTCTTCTCTATGGCGTCAGCCGGTCATTTGGGACATCTACAACATACCTCTGGCGGCTACAACGCAGGAGCTTACAACGCTGGCGCTTACAGTGGAGCTTATGGAGGCGCACAAATACCCATACTTAGTTACGAAAACATTAATAACGGCGACGGAACCTACAGATACAGCTATGAAACTGGTAACGGGATCTCTGCGCATGAGAGTGGCGCACCCCGCGCTCCCGGCCCCGAAGGTCTTGCCGTAACTGCAGAAGGCGGATTCTCATACCGCGCTCCAGACGGTCAGCAAGTCGCCCTTTCGTACACCGCTGACGAAAACGGCTTCCACCCGACCGGCTCCCATATCCCCACTCCCCCCCCGATCCCAGAAGCTATTCTCCGCTCCATCGAGTTCAACAGACAAAACCCTTCTTCTGGCGATGGTTCCTACCATCACGGCGGCCGGTACAACAATGCCTACCATTACTAA

Protein

MSALKIVSALALFSMASAGHLGHLQHTSGGYNAGAYNAGAYSGAYGGAQIPILSYENINNGDGTYRYSYETGNGISAHESGAPRAPGPEGLAVTAEGGFSYRAPDGQQVALSYTADENGFHPTGSHIPTPPPIPEAILRSIEFNRQNPSSGDGSYHHGGRYNNAYHY

Uniprot

C0H6J9 H9JBX0 G8FVP9 A0A2H1W3T6 A0A2A4J5L5 A0A2A4ITA3 + More
A0A2A4J6L1 A0A3S2N9Y2 A0A2H1W3Z0 A0A3S2NQM7 D6WFI5 A0A2J7R701

Pubmed

19280704 19121390 18362917 19820115

EMBL

BR000509 FAA00510.1 BABH01014839 JN082719 AER27816.1 ODYU01006154 + More
SOQ47759.1 NWSH01002882 PCG67375.1 NWSH01008628 PCG62474.1 PCG67376.1 RSAL01000374 RVE42117.1 SOQ47758.1 RVE42119.1 KQ971327 EFA00928.1 NEVH01006738 PNF36609.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000007266 UP000235965

PRIDE

C0H6J9 H9JBX0

Pfam

PF00379 Chitin_bind_4

Interpro

IPR031311 CHIT_BIND_RR_consensus + More
IPR000618 Insect_cuticle

ProteinModelPortal

C0H6J9 H9JBX0 G8FVP9 A0A2H1W3T6 A0A2A4J5L5 A0A2A4ITA3 + More
A0A2A4J6L1 A0A3S2N9Y2 A0A2H1W3Z0 A0A3S2NQM7 D6WFI5 A0A2J7R701

KEGG

100379458 no KO assigned | (RefSeq) CPR8, BmorCPR8; cuticular protein RR-1 motif 8

GO

GO:0042302 GO:0005515 GO:0004672 GO:0005524 GO:0006468 GO:0004674 GO:0006418 GO:0003723 GO:0046872 GO:0003824

SignalP

Position: 1 - 18, Likelihood: 0.989069

Length:

167

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.29987

Exp number, first 60 AAs:

1.29883

Total prob of N-in:

0.11046

outside

1 - 167

Pi

151.466829

Theta

165.066789

Tajima's D

0.241909

CLR

24.497827

CSRT

0.434728263586821

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree