Gene

KWMTBOMO10433

Pre Gene Modal

BGIBMGA007085

Annotation

cuticular_protein_RR-1_motif_7_precursor_[Bombyx_mori]

Location

Bomo_Chr17(+):10863339-10866563      View in EpiBrowser

Full name

Pupal cuticle protein 20      

Alternative Name

MS-PCP20

Location in the cell

Extracellular   Reliability : 2.062

CDS

ATGACGAAATTGATTATTTGGCTGGCGGCATTAGCAGTGGCAGTGAAGAGTGAGCGGTTAGATCATTTGTTGCCACAAGGATATGCCCCTGCGAGTGCGGGGGCCTTCAGTGGACAAGCTTCACCGCCCTTCAAATTCGAAAATGTGAACAACGGAGATGGGAATTATCGGTTCAGCTATGAAACCCCAGAAGGTATATCAGCATACGAGAGCGGCGCCCCACGAGCTTCCGGACCAGAGGGACCTGCTGTGACCGCTGAAGGCGGGTTCTCGTACCGCGCCCCTGACGGCCAGCAGATCTCTCTAACTTACACCGCCGATGAAAACGGCTTCCATCCAGTTGGTGCTCACCTTCCAACGCCACCCCCAATTCCTGAAGCGATTCAAAGATCCTTGGAGTTAAACCGACAGAACCCTTCTTCGTAA

Protein

MTKLIIWLAALAVAVKSERLDHLLPQGYAPASAGAFSGQASPPFKFENVNNGDGNYRFSYETPEGISAYESGAPRASGPEGPAVTAEGGFSYRAPDGQQISLTYTADENGFHPVGAHLPTPPPIPEAIQRSLELNRQNPSS

Description

Component of the pupal abdominal endocuticle. May have important role in the larval cuticle structure.

Keywords

Cuticle   Direct protein sequencing   Signal  

Feature

chain  Pupal cuticle protein 20

Uniprot

C0H6J8   A0A2A4J770   A0A2H1W3Z8   A0A194QTE6   A0A3S2NQM7   A0A2H1W3Z0   + More
A0A194PI00   G8FVP9   A0A212F4P1   A0A2A4J5L5   A0A2H1W3T6   C0H6J9   A0A2A4ITA3   H9JBX0   A0A3S2N9Y2   A0A2A4J6L1   A0A0L7KN10   A0A212F4M0   A0A194PIA4   A0A194QU08   A0A2A4J5G4   C0H6K0   Q8T635   A0A2H1VDR6   A0A1W4XIR7   A0A1W4X996   D6WFI5   D6WFI1   D6WFI2   A0A2P8Y5M9   A0A1W4XNY4   A0A1W4XN34   J3JTR4   A0A182NC76   A0A1B6CC76   A0A2S1ZS73   A0A194Q3B6   N6UBI4   A0A182QJX5   A0A1B6G169   A0A1B6IE24  

Pubmed

19121390    19280704    26354079    22118469    26227816    12609518    + More
10646967    18362917    19820115    29403074    22516182    23537049    29712872   

EMBL

BABH01014839    BR000508    FAA00509.1    NWSH01002882    PCG67374.1    ODYU01006154    + More
SOQ47757.1    KQ461137    KPJ08798.1    RSAL01000374    RVE42119.1    SOQ47758.1    KQ459603    KPI93046.1    JN082719    AER27816.1    AGBW02010343    OWR48682.1    PCG67375.1    SOQ47759.1    BR000509    FAA00510.1    NWSH01008628    PCG62474.1    RVE42117.1    PCG67376.1    JTDY01008633    KOB64471.1    OWR48681.1    KPI93047.1    KPJ08799.1    PCG67377.1    BABH01014840    BR000510    FAA00511.1    AF487520    AAL90881.1    ODYU01002010    SOQ38983.1    KQ971327    EFA00928.1    EFA00924.1    EFA00925.1    PYGN01000899    PSN39565.1    APGK01041297    BT126622    KB740993    KB632256    AEE61585.1    ENN76004.1    ERL90770.1    GEDC01026383    JAS10915.1    MF942789    AWK28312.1    KQ459586    KPI97900.1    APGK01041301    ENN76007.1    ERL90769.1    AXCN02001761    GECZ01013580    JAS56189.1    GECU01022554    JAS85152.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000283053    UP000053268    UP000007151    + More
UP000037510    UP000192223    UP000007266    UP000245037    UP000019118    UP000030742    UP000075884    UP000075886   

PRIDE

C0H6J8    C0H6J9    H9JBX0    C0H6K0   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6J8   A0A2A4J770   A0A2H1W3Z8   A0A194QTE6   A0A3S2NQM7   A0A2H1W3Z0   + More
A0A194PI00   G8FVP9   A0A212F4P1   A0A2A4J5L5   A0A2H1W3T6   C0H6J9   A0A2A4ITA3   H9JBX0   A0A3S2N9Y2   A0A2A4J6L1   A0A0L7KN10   A0A212F4M0   A0A194PIA4   A0A194QU08   A0A2A4J5G4   C0H6K0   Q8T635   A0A2H1VDR6   A0A1W4XIR7   A0A1W4X996   D6WFI5   D6WFI1   D6WFI2   A0A2P8Y5M9   A0A1W4XNY4   A0A1W4XN34   J3JTR4   A0A182NC76   A0A1B6CC76   A0A2S1ZS73   A0A194Q3B6   N6UBI4   A0A182QJX5   A0A1B6G169   A0A1B6IE24  

KEGG

100379459    no KO assigned | (RefSeq) CPR7, BmorCPR7; cuticular protein RR-1 motif 7

GO

GO:0042302   GO:0016021   GO:0005515   GO:0004672   GO:0005524   GO:0006468   GO:0004674   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

SignalP

Position:   1 - 17,         Likelihood:  0.992673

 

 

Length:

141

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00312

Exp number, first 60 AAs:

0.00312

Total prob of N-in:

0.11959

outside

1  -  141

 

 

Pi

131.837989

Theta

133.357581

Tajima's D

0.55034

CLR

1.061722

CSRT

0.526123693815309

Interpretation

Uncertain