SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10432
Pre Gene Modal
BGIBMGA007016
Annotation
Protein_folded_gastrulation_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.858 Nuclear   Reliability : 2.129
 

Sequence

CDS
ATGTGGTACACGTGGACGACGTTATTACTGGTGTCGTGCGCACTAGTGGAAGCGGCAGAAGTCGAGGTGACTACTACTGAGGCCGTGGTCCCGGCTGTGGTCACGACGACTAGGCCGCCACCGCGTACCCTCGACCGCCTCGCCGCTGAACTCGCATGGAAATCTTGGCTTCAGAGTCCTGAAAGCGGTAACCCAAATGCGCCGCGGAGGAGAATAACTACAAAATCTCTGTTCATAACTCCTCTCGTTTGTCCGAAAGGACAAAGACTGGATGGAAACGGTTGCGTTCAGACGGTGACTGTTAATAAAGATGAACACGAACGCATCCTGCTAGAGGAATTGAACGCACAGTTCAAGCCAACTTTAAGCGGAGATGTTACTTACTATGACAACTATGACGAAAACGAACCTGGCCCATTACAGCTCTCTATTCCTATAGGATTGGATCCGCTGGCTGCACCTCTTCAAGGCCAAGGGCTATCGGATCAGGCTTCACAAGGCAGCCATGACAATATCAACAAGAAAGATGGGAATAAGCCAGTCTCAGACGCCAGCATTGAAGCTGAATTAGAACTTCTAAAACTACAACACCCGCATAACGACACTGGTCTGCCAGACGGTGCAGGTGTGTTGAATCATAACGTATTGACTAATTTCCACTTCGCGGAGAAACCCAAACGTGATAGCCCACTGAACGCTACCGAAATAGAAACTATCAATAATATGGCTGACCAAGGTCAAAAAGAAGTTGTATATGGACACGTTAACATTGATCCCATACTTTACGGAAACCAACAACAACTAACGGATAGTACTAGCAAGAAAAATGATATACCAAAAACAGACACTTTGGAAATCAATGCAAGTACAGAAAGTAATTTAGCTTCCAACACAAAAGAAGAACATAAGCAGACCGACGTTAAAGTAGCGTCACAAACACAGCAAGTTTTGTCTAAAAACGGAGAACAATCTAAACTTAACCCTGAAAACGACTATTCTGATATTGGTGAGGCTATAAAATTGATTAGTCGATACGCAGAAGTGACGACTGACGATAATTTTTCCAAAGATCAAAAGAATCAGCAATTCAAAGAGGAAGGTGTACTGGGAACACGTACTAAACTACAACATCGTCGTAACAGGCCACAGTCAGGAAGCGCTGAAATATCGTTTGGTCCATTATCAACAGACATAGCGCACAATATACCTGACCGCGAGAAGTTTGTTAATAAAGGTATTATATACCGCTACCCGTGGCCAAACCAACAGTTTCGCTCTCCTCCACCCGGTTACCCCTTCCAACAACTTCAGGATTATTGGCCGGGACAAAACAAACTTGGGGGGGTTTACAATGGACACGAAAACCCACGACGTCATCATCATTCTTACCCTCACAACTTTAGACCTCGCGAATTCGGAGTATATCCTGGAATGCAAGAACCATACCCGGAACAACTGAGGCGGTACATTCATAGAGTAGTACAACATCATTCAAACCCACAAAGATCTCACGACAGCCAAGATCTCTATAGTCTCCTTGGACTCAGGCACTGGTTTAGTAGTGAAGACACTACGAAAAGATAG
Protein
MWYTWTTLLLVSCALVEAAEVEVTTTEAVVPAVVTTTRPPPRTLDRLAAELAWKSWLQSPESGNPNAPRRRITTKSLFITPLVCPKGQRLDGNGCVQTVTVNKDEHERILLEELNAQFKPTLSGDVTYYDNYDENEPGPLQLSIPIGLDPLAAPLQGQGLSDQASQGSHDNINKKDGNKPVSDASIEAELELLKLQHPHNDTGLPDGAGVLNHNVLTNFHFAEKPKRDSPLNATEIETINNMADQGQKEVVYGHVNIDPILYGNQQQLTDSTSKKNDIPKTDTLEINASTESNLASNTKEEHKQTDVKVASQTQQVLSKNGEQSKLNPENDYSDIGEAIKLISRYAEVTTDDNFSKDQKNQQFKEEGVLGTRTKLQHRRNRPQSGSAEISFGPLSTDIAHNIPDREKFVNKGIIYRYPWPNQQFRSPPPGYPFQQLQDYWPGQNKLGGVYNGHENPRRHHHSYPHNFRPREFGVYPGMQEPYPEQLRRYIHRVVQHHSNPQRSHDSQDLYSLLGLRHWFSSEDTTKR

Summary

Pfam
PF15888   FOG_N
Interpro
IPR031761   FOG_N       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998368
 
 
Length:
527
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01943
Exp number, first 60 AAs:
0.01943
Total prob of N-in:
0.00231
outside
1  -  527
 
 

Population Genetic Test Statistics

Pi
207.393856
Theta
181.822897
Tajima's D
-1.857237
CLR
0.361505
CSRT
0.0222488875556222
Interpretation
Possibly Positive selection
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