SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10429  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007083
Annotation
putative_BTB/POZ_domain-containing_protein_KCTD5_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 4.133
 

Sequence

CDS
ATGAAAGCCTTCGTGAACAAGCTTCAAGAGGATAGTGACTTGATATCAGACAGGGATGAGACTGGCGCTTATTTAATAGATAGAGACCCGACATATTTTTCACCTGTCCTCAATTATCTTCGCCACGGTAAATTGGTGATTAACAATGATATTGCTGAAGAAGGGGTTCTCGAAGAAGCAGAATTCTACAACATTACGGAACTTATAAGATTAGTTAAAGAGAGAATATGTCTCAGAGAGAGAAGACCTTTGAAAGATTCCAAGAAACATGTATACAGAGTTCTGCAGTTTCATGAAGAGGAGCTGACACAGATGGTTTCCACAATGTCAGATGGTTGGAAATTTGAACAACTAATCAATATTGGTTCACAGTATAACTATGGCAATGATGAACATGCAGAGTTCCTTTGTGTGGTTAGTCGTGAATGTGGTAGTACACTCAACAGTAATGACATTGAGTCAACAGATCGTGCAAAAGTGTTGCAGCAAAAAGGCTCACGAATGTGA
Protein
MKAFVNKLQEDSDLISDRDETGAYLIDRDPTYFSPVLNYLRHGKLVINNDIAEEGVLEEAEFYNITELIRLVKERICLRERRPLKDSKKHVYRVLQFHEEELTQMVSTMSDGWKFEQLINIGSQYNYGNDEHAEFLCVVSRECGSTLNSNDIESTDRAKVLQQKGSRM

Summary

EMBL
AGBW02012273    OWR45301.1    NWSH01005753    PCG63976.1    GAIX01003287    JAA89273.1    + More
KQ459603    KPI93042.1    AK403161    BAM19597.1    KQ461137    KPJ08793.1    BABH01014833    JTDY01002381    KOB71538.1    RSAL01000374    RVE42123.1    PYGN01000334    PSN48319.1    KQ435698    KOX80755.1    KZ288467    PBC25391.1    GBYB01007664    JAG77431.1    DS235760    EEB16599.1    NEVH01004429    PNF39368.1    KQ434782    KZC04637.1    KQ971361    EFA08653.1    GBHO01025070    GBRD01005538    GDHC01021137    JAG18534.1    JAG60283.1    JAP97491.1    LBMM01007026    KMQ90111.1    GL440412    EFN65948.1    GBYB01007662    JAG77429.1    GL761667    EFZ22938.1    KQ414657    KOC65857.1    QOIP01000004    RLU24025.1    KK107046    EZA61704.1    GL448810    EFN83773.1    KQ978143    KYM96765.1    GEDC01010144    JAS27154.1    KQ981522    KYN40687.1    GL888423    EGI61167.1    ADTU01026235    KQ976445    KYM86069.1    KQ980794    KYN13045.1    KQ982747    KYQ51336.1    LJIJ01000136    ODN01855.1    KQ762903    OAD55281.1    GEZM01098838    JAV53726.1    GEBQ01017947    JAT22030.1    GECU01022058    GECU01019122    GECU01016356    GECU01015722    GECU01004245    JAS85648.1    JAS88584.1    JAS91350.1    JAS91984.1    JAT03462.1    GECZ01030930    GECZ01014755    JAS38839.1    JAS55014.1    LNIX01000004    OXA55609.1    APCN01004006    AAAB01008846    EAA06309.3    AXCM01005936    KK852663    KDR19053.1    KK113790    KFM61051.1    MWRG01009554    PRD27022.1    GFWV01010430    MAA35159.1    GBBI01000631    JAC18081.1    GGLE01004246    MBY08372.1    GECL01001311    JAP04813.1    GFTR01003764    JAW12662.1    GBGD01002819    JAC86070.1    APGK01039918    KB740975    KB632186    ENN76468.1    ERL89754.1    GGFK01011207    MBW44528.1    GGFM01004851    MBW25602.1    ADMH02000102    ETN67818.1    GGFJ01009230    MBW58371.1    GAMD01003381    JAA98209.1    GDUN01001050    JAN94869.1    JXUM01001285    JXUM01001286    KQ560119    KXJ84384.1    GDKW01002675    JAI53920.1    GAHY01000666    JAA76844.1    GAPW01003054    JAC10544.1    AXCN02001424    KB200521    ESP01381.1    PZQS01000001    PVD37970.1    GFDL01002932    JAV32113.1    AHAT01000205    GFDL01002931    JAV32114.1    GFDL01002934    JAV32111.1    GL732526    EFX87883.1    GDIP01133463    JAL70251.1    GDIP01180301    JAJ43101.1    DS231940    EDS28015.1    JW872177    AFP04695.1    AFYH01091790    AFYH01091791    AL954768    BX470098    GANP01004048    JAB80420.1    BC122218    AAI22219.1    GDIP01111611    GDIQ01084568    JAL92103.1    JAN10169.1   
Pfam
PF02214   BTB_2
Interpro
IPR011333   SKP1/BTB/POZ_sf        + More
IPR000210   BTB/POZ_dom       
IPR003131   T1-type_BTB       
SUPFAM
SSF54695   SSF54695       
PDB
3DRY     E-value=1.70596e-60,     Score=584

Ontologies

Topology

Length:
168
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.22752
outside
1  -  168
 
 

Population Genetic Test Statistics

Pi
221.678556
Theta
182.323875
Tajima's D
0.640889
CLR
0.068714
CSRT
0.555472226388681
Interpretation
Uncertain
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