SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10428
Pre Gene Modal
BGIBMGA007018
Annotation
PREDICTED:_endochitinase_A_isoform_X1_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.357
 

Sequence

CDS
ATGAGTGGTAATATGGAAAGTGATAGATCTGTTACAACTGGCAAGATGTACCCAATAGATTTGGCGCCTCAAAAAATCACTATAGTTAAAAATGTAACTAATAATGAGGTTAAAATGGCGCATTTAATAAGTGGACAAACCAAAACTTCGGGTTCTAACCCCATACTGGGTCACTCCAACGCTAGTTCGACAGTGATGCGACCTGGCTTGGCGCAGATTATTGCGCCGAATGTTGTCTCCCAGGGAACTCAGATTGTCAGCCAAGGGTCCCAAATATTAGGACAAAACTCACAAATTATATCCCAATCACAACTGATCACACCAAGCGGTCAAATTATAAGTCCTGCTACACAGATCATAAGTCAAGGAACTCAGTTGTCAGCTCCTGCATCAACATCTAACAACGCCAGTGTGCAGAATACCATACAAACCAATGTTGCATCATCAGTGAGTGGTGCCCAGGTACTGAATGTAGGACAGCTTGTCACAGGTGCCGGAAATGTAGTGGTAAACTCATCAGTGAGGACATTACCTCCTACAGTCAGAGTTATACCACCATCAACCCATCATAATACAAGACCAGCTGTTCAATTGTCAAGTGTGAGTAATTCAGGAGGGGTTCTTGTGACCAAAACTGTGAGTACAACAAGTCATGTGCCACGCGGACTCGCTGCTGGAGCATCCCTTGCAGTGAGACCTGTGGCACCGCCTGTCTCTCAATCTTCCGGATTAGTGAATTCGGGCAGCACATGGTCAAACACCAATCGCACTGCCCGCAGTGCATTGGTGTATGCAACAAGACCATCAACTCCTGCTCCTGCTTCTCTATCCACAATACTCACAATACCAACCACTTCAACACTCAATTCAAGTGGTGTAATATCAAGCACAGTTCGTGGACTAAGTCCTAGGCTGCCAACAGCTTCCCCTACTTCTGCAGGACCGCCACCTCGACCTCTACCACTGCTGCAGCGAAATTACCAACCAGCAAAAGTGGTAGGTGTGGCGAGTGTAGGCGTTCGCGGTGTAGTGGGTAACAGTGCGCCCACACAGCTGTACTACGAAGTGCCTCGCGCCCCTCACCCCGCGCACTCCCCCGCGCCCGCCGCCAACCTCACGCACCCGCCAGTTGCCGCTACTATCCCCTCTACCGGACTCGGTCTTACGACTAATTCTGCGGGACTCGGTCACGCCGGCGTCACTTCGACGGGCTTAGGACACGGTGGCAGTGCTCCCGCTTCGGCTGGATTGAGTCACGCGGCTTCCGCGGGACTGGGTCACGTGGCAACCGCGTCTACGGGACTAGGACACGGCGGCCTCACGGGCCTCTCGCTAGCTGCGAACGTGGCCAGCGCTCCTATGGGCGGACTCGCACACGCGCTCACTGCGCACGTACATCGGCCGCTCACACCTTACGCGCAATCCCACACACATCCGTCAGTGAACCAGGTGAACTCTTCATCGGCATTACCAGAAACCAGGCGGTCTCCGGCCCTTTTGTCCTCGAATTCTACAACTTCCATTACAGCGCAACCGAGGCCCTCGATACTCAGAAAAAGGGATCTCGAGAGTTCGCCAATAAAACCTATAAGCATAGTACAGACAAGTGCTTACAATACTGGCACAGGCTGGGAAGACGTGCCAGCTGGAGGTGGAGGTTCAGGCTCGACCACAATCTCGGCCTCCTCGTCTCCACACCCGGACGACGAACCAGAGCCCCCGCCTATAGATAGTGACCTCTCCCCTAGAAAGAAACCAAGGAAACAGACGTTGACTAATGACGTCAGACATTGTGACTATCAGAATGACGAGCAGCCATCGTCGCCACCTCAGATAACTATAAAAACACCAAAACGTCCGCAGCTGGGCTCTAGCTACGTGTGCGGGTGGCGCGGCACGGCGCTGCACTTCGTGCGACCCAGTGACGTCAAACGTCGGGAGCCGCGTCCGCGTGACATCACCGCCATCGCCGCGCAACGACACGTGCTCGCCACCGCGGACGGCTGGAAGCTGCACCACCTCACCGCACAGATGGACGATCTCGTATCATTGGAATCAGACGTGGGAGAACAGTTATCGGTACTACTACGAGGTTTAGAATCAGCACCAATGCGAGCTCTCAGTGCCTTACAGCCACACGAACATCCTCTCTTGGAATTGCTCAAAGGTAACATACAAAGGAGTAAAATAGTATGTGAAGGTATCCAGGAAGCGAGAGCCGACATACTGCGAGTATTTACACACCGGAAATTTGTATCAGAAATTCTAACTCGACAAGCTGACAAAAGATGTTTTAGAAAGCATAGATCCCAATCATAG
Protein
MSGNMESDRSVTTGKMYPIDLAPQKITIVKNVTNNEVKMAHLISGQTKTSGSNPILGHSNASSTVMRPGLAQIIAPNVVSQGTQIVSQGSQILGQNSQIISQSQLITPSGQIISPATQIISQGTQLSAPASTSNNASVQNTIQTNVASSVSGAQVLNVGQLVTGAGNVVVNSSVRTLPPTVRVIPPSTHHNTRPAVQLSSVSNSGGVLVTKTVSTTSHVPRGLAAGASLAVRPVAPPVSQSSGLVNSGSTWSNTNRTARSALVYATRPSTPAPASLSTILTIPTTSTLNSSGVISSTVRGLSPRLPTASPTSAGPPPRPLPLLQRNYQPAKVVGVASVGVRGVVGNSAPTQLYYEVPRAPHPAHSPAPAANLTHPPVAATIPSTGLGLTTNSAGLGHAGVTSTGLGHGGSAPASAGLSHAASAGLGHVATASTGLGHGGLTGLSLAANVASAPMGGLAHALTAHVHRPLTPYAQSHTHPSVNQVNSSSALPETRRSPALLSSNSTTSITAQPRPSILRKRDLESSPIKPISIVQTSAYNTGTGWEDVPAGGGGSGSTTISASSSPHPDDEPEPPPIDSDLSPRKKPRKQTLTNDVRHCDYQNDEQPSSPPQITIKTPKRPQLGSSYVCGWRGTALHFVRPSDVKRREPRPRDITAIAAQRHVLATADGWKLHHLTAQMDDLVSLESDVGEQLSVLLRGLESAPMRALSALQPHEHPLLELLKGNIQRSKIVCEGIQEARADILRVFTHRKFVSEILTRQADKRCFRKHRSQS

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
772
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01316
Exp number, first 60 AAs:
5e-05
Total prob of N-in:
0.00048
outside
1  -  772
 
 

Population Genetic Test Statistics

Pi
198.47344
Theta
206.176801
Tajima's D
-1.575487
CLR
1959.564724
CSRT
0.0526973651317434
Interpretation
Uncertain
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