Silkworm Genome Informatics Database

Gene

KWMTBOMO10412

Pre Gene Modal

BGIBMGA007077

Annotation

PREDICTED:_uncharacterized_protein_LOC101740889_[Bombyx_mori]

Location

Bomo_Chr17(+):10493024-10495053 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.103

CDS

ATGATAAATCTTCTGAATATGGACGGCATCATGAATGACGACAACGATAAAGTAATTCTTGCTAGCAGATTCTGTAAAGATTATATTCGTGGTAGCTGTGCTCGCGAGAATTGTAAATTTATTCACGAAAAACCACCGAGAACCTTACTGAAAGAATTGTTTCGTTTCTGCCACGACTATCAAAACAAAGGTTGCTATAGAACAAACTGCAAGTTCTTACACAGCACCGTAGAAGATGAAGAAAATTTTTATCATACAGGAATTTTCCCCAGAGATTCACGAAATGTCGCGGTTTGTCAGGCTTATATACATGGATCTTGTTCTAATAAAGATTGTAAATACAAACACCCGTCTGATTTGATCAGCAACGAAGCTTGTAATGAAGTAGTAACAATTCATAATATAACTCAACCACAGTTTCGCATTCCTCTCTCTACAACCCTTAGAGATAATGATTCTCCTCCGGGAGCAAAATTTAGACGAATCACATATGAAGATACTGGAATTGAAAATCAAGTTCTGACTCCTGCAAATATTTGCCCTAATTGCGAATGTCTAGATCATAAAGTGAAATTATTGCATGATAACATAAGTGTTTTACTAAAAAAAATTACAGATCTATCAGAAAAGAATTTGCAACTGACTTCAATGAATGAATTTCTTTTGGAACAAACTGCTTCTGTGAGAACCGATCAGCCTTGTGTTATTACATCTCGACATGGAACATCAGCTCCAGTTTCATTGGCTACTGTAAGTGTAACACCAGTTGTCAGTCTTGCTGGTGCATTGCCTACTTTAGTTCCTGCAGCAGCAACACCGAATCTAACTTTGGCCCCAGCAGCATCAAGAGCACAATTGTTGACTCCTGCACCACAAATACTCACTGTAAGCACAACTCAACAACTTATGGGCAATTCTGGAGCCCTCATTGTTACTAGTGCAGGAGCTCAGCAGTTGATGCAAGTTAGTGATTCAGGAACATTGATGGGAGGCGGACAAACAGTAGTAGCTGTACCAGCACAACTGACTATAGCACAACCTGCTCAGCAGTTAATGAGCAATGCATCTCAAACAGCAGTTCAACAACTCGTACAACAGTCTGCGTTACAGTCTCAACTAGCTCCACAACACCAAGCTCCACAATATGCAACCCAACAATCTGTACAACATTTGGCAGCACAGCATTCTGCACAGCATCTGGCGCAACAGTCTGCTCAACATCTTGCTGCACAACAGTCAGTTCAACATTTAGCTGCTCAACAATCAGCTCAACATTTGGTAGCACAACAATCAGCTCAACATTTGGCAGCCCAACAGAATGCTCAACATCTTGCAGCACAACAGAATGCTCAACATCTTGCAGCCCAACAGAATGCTCAACATCTTGCAGCACAACAGTCAGCACAGCATTTAGCAGCTGCAGCACAACAATCAGCCCAACAATTGGCAGCAGCAGCACAACAATCTGCACAACAAATGGTGGCACAACAGTCTGCTCAGCAACTTGCTGCTCAACAATCTCAACAACTAGTACCATCGGCTCAACAGCTTGTTCACCAAACATCAACTCAACAAATAACAATATCCAGCACTAGTCAGCCAATGGCCATGGCAAATTCACAGCCTATAAGATTCCCAATTATATCTCAAAGTATTCTACCACATTAA

Protein

MINLLNMDGIMNDDNDKVILASRFCKDYIRGSCARENCKFIHEKPPRTLLKELFRFCHDYQNKGCYRTNCKFLHSTVEDEENFYHTGIFPRDSRNVAVCQAYIHGSCSNKDCKYKHPSDLISNEACNEVVTIHNITQPQFRIPLSTTLRDNDSPPGAKFRRITYEDTGIENQVLTPANICPNCECLDHKVKLLHDNISVLLKKITDLSEKNLQLTSMNEFLLEQTASVRTDQPCVITSRHGTSAPVSLATVSVTPVVSLAGALPTLVPAAATPNLTLAPAASRAQLLTPAPQILTVSTTQQLMGNSGALIVTSAGAQQLMQVSDSGTLMGGGQTVVAVPAQLTIAQPAQQLMSNASQTAVQQLVQQSALQSQLAPQHQAPQYATQQSVQHLAAQHSAQHLAQQSAQHLAAQQSVQHLAAQQSAQHLVAQQSAQHLAAQQNAQHLAAQQNAQHLAAQQNAQHLAAQQSAQHLAAAAQQSAQQLAAAAQQSAQQMVAQQSAQQLAAQQSQQLVPSAQQLVHQTSTQQITISSTSQPMAMANSQPIRFPIISQSILPH

Uniprot

D6WIY8 N6UH48

Pubmed

18362917 19820115 23537049

EMBL

KQ971342 EFA03863.1 APGK01026301 KB740624 KB632335 ENN79961.1 + More
ERL92790.1

Proteomes

UP000007266 UP000019118 UP000030742

Pfam

PF07061 Swi5

Interpro

IPR000571 Znf_CCCH + More
IPR010760 DNA-repair_Swi5

ProteinModelPortal

D6WIY8 N6UH48

PDB

2RPP E-value=0.00352887, Score=97

KEGG

101740889 no KO assigned | (RefSeq) uncharacterized LOC101740889

GO

GO:0003723 GO:0046872 GO:0005634 GO:0005654 GO:0005737 GO:0000381 GO:0004842 GO:0016579 GO:0004674 GO:0006415 GO:0016021 GO:0006418 GO:0003824

Length:

555

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04319

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00202

outside

1 - 555

Pi

221.304177

Theta

228.358054

Tajima's D

-0.133408

CLR

0.051698

CSRT

0.328983550822459

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics