SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10411
Pre Gene Modal
BGIBMGA007024
Annotation
PREDICTED:_uncharacterized_protein_LOC106142415_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 2.28
 

Sequence

CDS
ATGTTCAAGCATCAACTTTCGTCTCGTAATGTTCACTCGTATCAAACAACAGTAGTACCTCGAAGCAATCAACAAATCCTGTCGGCTGCTGAACAAAGAGCTAAGTTTCCATGGGCTGATGATATAAACCCATCAGTGTATCAGGCCGGCACTGATAGTTCAATATCAGAAAACGCATATCAATTACCACAGTACTATGTTGGTGGAAGGAATGATGATCCTCCATCCCCTGTATACCAATCCCCTTATGGAGGAGGAACATGGCGGAGTTACAGTAAAGCACAAAAAGTTCATATGCAAGACGCATATTGTTTCCCACAATGTTCTTCAGCATTTTCATTGCCATTATACAATCCTGAACCCAATGTTCCACCTTTGAGTAGGTCACCGGTACCTCCAATACCATCAGTAAGCCCTGAGGTGCCTATCATTGGAGCTTGTGGAGGTCATTGTCCTGGCTTTGAGTATGTTTGTTATTATATTCTGCAGGTGATATTTGTAGTTGGTATATTGACTGGTATTTCATTGTGTATTGCTGGTATTGTATTAAGACGAACAAACAGAAATGGAGATTTGGGAGTTTTAGTTTATATTGGATGCCTCTCATCGTGTGTTTGCTGTGTATTACTAGGCGTACAGTGTTGCGTTCGTCGTGAAATTAAGCAGCGAAAATTCCGTGCAAATGTGCATATTCCAATGCAGGCGATTAGAGAACCTCCACCAGTGTGTCCTTTATTGACTTCTTCTCAACCTCATAGCCAAATTTATAGGCCAACAACGAACATATGTCCGGATGAAGACATTACCGGTGTCCCGTGGTGGCGTCGTAATAATGAGACTGATTAA
Protein
MFKHQLSSRNVHSYQTTVVPRSNQQILSAAEQRAKFPWADDINPSVYQAGTDSSISENAYQLPQYYVGGRNDDPPSPVYQSPYGGGTWRSYSKAQKVHMQDAYCFPQCSSAFSLPLYNPEPNVPPLSRSPVPPIPSVSPEVPIIGACGGHCPGFEYVCYYILQVIFVVGILTGISLCIAGIVLRRTNRNGDLGVLVYIGCLSSCVCCVLLGVQCCVRREIKQRKFRANVHIPMQAIREPPPVCPLLTSSQPHSQIYRPTTNICPDEDITGVPWWRRNNETD

Summary

Ontologies

Topology

Length:
281
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
44.91618
Exp number, first 60 AAs:
0
Total prob of N-in:
0.92531
inside
1  -  159
TMhelix
160  -  182
outside
183  -  191
TMhelix
192  -  214
inside
215  -  281
 
 

Population Genetic Test Statistics

Pi
35.023797
Theta
143.4791
Tajima's D
-2.292434
CLR
318.687781
CSRT
0.00329983500824959
Interpretation
Uncertain
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