SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10410
Annotation
PREDICTED:_uncharacterized_protein_LOC106119134_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 2.617
 

Sequence

CDS
ATGCCAACGAGTGCCGTGTATCAACCTACGACGGTAACGTACGAGCAGCAGCCTAATGATCAACGGTGGAATTGTCCCATCAGCTACTTTTCACGACGTGTGACAAGTAGTCTGAACCGGGCCGTTTGTTTGCGCATAGGATTGTGTTTATTGGGCAGCACTTTTTGCGTTATTGGTTTGGCACTGCTCATAGCTGGCATCGTACAGTATTCGAACACACCAGACACAACGCCAACAGGATCAGACAATGGGCTGGGAACGCTGATTGCGGGTGGTGTTATATTGCTTCTTGGATTAATATTTGCCGCTTTCGGTGCTTGGATATGGTCGTCGCGGCTGACAGGCGGCAAGGAGGCGCCCAGCAGTGGTGCGGCTGGGCTGACTGCCCTAAACCCGTCCACGGACCCCCTGGTGGCGGCTCAGTATGCGCCCGTCCGAGACGCCCCGCCCGCTCCTGACGATGAGATGCGCAACCTCATGGACAATAAAGAATGCTTGAGCAGCGCGGAAGAAAGCGACAAGATGTTGGACGGGAGGCCAAGTGTGGCCTAG
Protein
MPTSAVYQPTTVTYEQQPNDQRWNCPISYFSRRVTSSLNRAVCLRIGLCLLGSTFCVIGLALLIAGIVQYSNTPDTTPTGSDNGLGTLIAGGVILLLGLIFAAFGAWIWSSRLTGGKEAPSSGAAGLTALNPSTDPLVAAQYAPVRDAPPAPDDEMRNLMDNKECLSSAEESDKMLDGRPSVA

Summary

Ontologies

Topology

Length:
183
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
46.04293
Exp number, first 60 AAs:
15.23112
Total prob of N-in:
0.99479
POSSIBLE N-term signal
sequence
inside
1  -  45
TMhelix
46  -  68
outside
69  -  87
TMhelix
88  -  110
inside
111  -  183
 
 

Population Genetic Test Statistics

Pi
25.241845
Theta
169.73333
Tajima's D
0.679789
CLR
0.463081
CSRT
0.566821658917054
Interpretation
Uncertain
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