Gene
KWMTBOMO10408
Pre Gene Modal
BGIBMGA007076
Annotation
PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X1_[Bombyx_mori]
Full name
E3 ubiquitin-protein ligase
Location in the cell
Nuclear Reliability : 3.73
Sequence
CDS
ATGTCGACGCCCATGTCAAATCGTAAATATGGAGCCCAAAAAATTAGGCTAACTATTATATGTGCAAGGAATTTGGTCCGAAAAGATCTCTTTCGTTTGCCAGATCCTTTTGCCAAAATATCAGTCGACGGCAGTGGCCAAGTATATTCAACAAATACAGTGAAAGCAACACTTGATCCAAAATGGAATACACATTATGATCTTTATTTAAGCAAAGGAGATGGAATTACCATAAGTGTATGGAACCAACGCAAAGTCCACAAAAGGCAAGGGTCTGGTTTTTTAGGATGTGTTCGTATACAACCATCAACTGTACATAAGCTAAAAGATACAGGATACCAATGTCTAGAACTCTGTGAAGATGGACAGTCTGGTGAGACGTGTGGAGTCAAAGGCCAGGTCATAATTTCTCTTATGTCAAGAGATAGTGCCCGTGGGGAGCCCGCCTCTGCAGCCGGCGAGGGTTCTCCATTGGCAGTTGTTGGTCCTGCAGGAGAAGTTCGACCTCCTAGAGAACCAGTAGTCAGTCCAAACCCCTCTCAGCTGAGTTTACCACCTCATTGGGAGGAGAGATTCACTTCTAGTGGAAGGCCTTACTTTGTAAATCATTCGACACGTCGCACTCAATGGGAGCGTCCAACATCTGAGGGCTCAGAATCACCATCCCCTCCAACATCTCCGGCACTTGTCCCGAGTCCAACCACTTCACCTACGTTAACAAGTGCACCTTCCTCTCCTGGTTCTGATACTGACGTGAATCCTGCTACAACAATATCCTTGAGACCAGAACCCCAGCCACAGACTGCAGTACGTCGACAACCCGCAACTTGTACGCCTCCGACCAGCCCTTCATCTCCCACCACTCCTAACACAGCTGCGCCTGCTCCGATATCAGCTACAGATTTACCTCCAGGATATGAGATGCGCACAACGGCGCAGGGCCAGGTTTACTTCTACAACAGCGCTACTGGAGCGTCGACGTGGCACGACCCGCGCGTGCCGCCGCACCTGCGGCACTGCGCGGCGGCGGCGGGCCCGCTGCCCCCCGGCTGGGAGATGCGACACGCGCCCTCAGGACGACCCTACTTCGTGGACCACAACAACCGCACCACGCAGTTCACTGACCCCCGGCTCGCGCTCTCCGCTAGGCTTACGAACGAACCTGCTCCAACGAGTACTGCGTCTTCGGTGGCATCACCAGCGACGGTTTCGCTCTCGTCGTCCGCCACAGCCCCGGGCGCCGCGCCGGAGCCCCCGGACACTGACGCGCTACCTAAATACAAACGGGACCTTGCTGCTAAAGCGCGAGTACTGCGTGCTGAACTGCAAGCATTACAACCCCAGACTGGACATTGCAGAATAGAGGTATCTCGAAACGAAATATTAGAAGAATCATATCGACTCGTAATGAAACTTAGAGGTAAAGAACTTCGAAAGCGGCTGCTGGTCAAGTTCCGTGGTGAAGAAGGACTCGACTACGGCGGGGTGGCAAGAGAGTGGCTTCATCTCTTGGGAAGAGAGCTGTTCAATCCTCATTATGGACTATTTCAATATGCAAATGCTGGTGAAGATAGATATGCACTACAAATCAATTCTGATTCAGGAGTAAATCCGGAACACTTATCGTACTTCCACTTTGCGGGCCGCATCCTGGGCGTGGCGTTGTTCCACGGACATCAATTAGACGCGGCCTTCACAGCTCCTTTCTACAAGCAACTCCTAGGGCGACCTATAACTCTGCGAGATATCAAAGATGTTGATCCTGAATTGCATCGATCGTTATCATGGATGCTGTTAGTATTTGTATTTGTTTATTGA
Protein
MSTPMSNRKYGAQKIRLTIICARNLVRKDLFRLPDPFAKISVDGSGQVYSTNTVKATLDPKWNTHYDLYLSKGDGITISVWNQRKVHKRQGSGFLGCVRIQPSTVHKLKDTGYQCLELCEDGQSGETCGVKGQVIISLMSRDSARGEPASAAGEGSPLAVVGPAGEVRPPREPVVSPNPSQLSLPPHWEERFTSSGRPYFVNHSTRRTQWERPTSEGSESPSPPTSPALVPSPTTSPTLTSAPSSPGSDTDVNPATTISLRPEPQPQTAVRRQPATCTPPTSPSSPTTPNTAAPAPISATDLPPGYEMRTTAQGQVYFYNSATGASTWHDPRVPPHLRHCAAAAGPLPPGWEMRHAPSGRPYFVDHNNRTTQFTDPRLALSARLTNEPAPTSTASSVASPATVSLSSSATAPGAAPEPPDTDALPKYKRDLAAKARVLRAELQALQPQTGHCRIEVSRNEILEESYRLVMKLRGKELRKRLLVKFRGEEGLDYGGVAREWLHLLGRELFNPHYGLFQYANAGEDRYALQINSDSGVNPEHLSYFHFAGRILGVALFHGHQLDAAFTAPFYKQLLGRPITLRDIKDVDPELHRSLSWMLLVFVFVY
Summary
Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
Uniprot
EC Number
2.3.2.26
EMBL
Proteomes
Interpro
Gene 3D
ProteinModelPortal
PDB
1ZVD
E-value=3.98869e-62,
Score=606
Ontologies
GO
Topology
Length:
605
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01379
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.00214
outside
1 - 605
Population Genetic Test Statistics
Pi
128.14503
Theta
188.15412
Tajima's D
-2.589336
CLR
0.786241
CSRT
0.000299985000749962
Interpretation
Uncertain
