Gene

KWMTBOMO10405

Pre Gene Modal

BGIBMGA007075

Annotation

Uncharacterized_protein_OBRU01_07815_[Operophtera_brumata]

Location

Bomo_Chr17(+):10381544-10395174      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.825

CDS

ATGAGTGGAAAGCGCACCCGCAGCTATAGATGCGCAGTTCACCACCGAGATCGTGAAATCAGCTCGGAAAACGATTTCAAGCTTTTACTAGAAGATCCAACATTATTCGCCAGGATGGTGCACATAGTAGCGATGGGCATGCTCCCCGAGGAACGAGATCGGAAGTATTATCAGGAGCGCTACACGTGCTGCCCACCGCCATTCTTTATCATCTGCGTTACACTGTTAGAGTTGGGTGTGTTCGCGTGGTACGCGTGGGGAGCAGGCGGCGTGGCGGCCGCGGCAGGTCCGGTCCCTGTCGATTCTCCGCTGGTGTACCGTCCCGACAGGAGACGAGAAGTGTGGAGGTTCCTGACGTACAGCGTCGTCCACGCCGGATGGTTGCACCTGGCCTTCAACCTACTAGTGCAATTAGCCGTTGGATTGCCTCTCGAGATGGTGCACGGCGCGGTCCGTTGCGCCGCAGTGTACATGGCCGGCGTGCTGGGCGGTTCGCTGGCCGCGTCCGTACTAGACCCGGACGTTTGTTTGGCGGGCGCGTCCGGCGGAGTGTACGCGTTGCTCGCGGCGCACCTAGCGAACGCTCTACTCAACTTCCACACGATGCGGTACGGGGCCGTGAGGCTCGTCGCCGCCCTGGCGGTGGCCTCGTGCGATGTCGGATTTGCGGTGCACGCGAGCACTCATATACAGCGGTACTCATCACGTCAACATAGATAG

Protein

MSGKRTRSYRCAVHHRDREISSENDFKLLLEDPTLFARMVHIVAMGMLPEERDRKYYQERYTCCPPPFFIICVTLLELGVFAWYAWGAGGVAAAAGPVPVDSPLVYRPDRRREVWRFLTYSVVHAGWLHLAFNLLVQLAVGLPLEMVHGAVRCAAVYMAGVLGGSLAASVLDPDVCLAGASGGVYALLAAHLANALLNFHTMRYGAVRLVAALAVASCDVGFAVHASTHIQRYSSRQHR

Uniprot

H9JC30   A0A2A4ITJ2   A0A194QYU9   A0A0L7LGY2   A0A212FG79   A0A194PJW5   + More
A0A1I8NX50   A0A1I8MIP6   A0A2H1X359   A0A034WHX9   A0A0L0C4L1   A0A0K8VUR5   Q9W0F1   A0A0K8WFH2   A0A336K0V8   A0A0R1DUY6   A0A0Q5U2X0   A0A0J9RM31   Q17K93   A0A0A1XPZ3   A0A1Q3F0Y4   A0A0K8UIK6   A0A0R3P2E6   A0A182YJ12   A0A1L8DJN9   A0A182UPR3   Q86P37   A0A182NLX3   B0WAB7   A0A182WMC0   Q9BML4   A0A0R3P2E2   Q9W0E9   B4QM21   B4HVT7   B3NBB2   A0A0R3P2F4   A0A1W4VVH2   Q7PQ40   Q29FG6   W8CE66   A0A0Q9XRM0   B4MLF1   A0A0Q9WV19   A0A0P9AIQ2   A0A182G922   B4H1C0   A0A3B0JRU6   A0A1W4W7X4   A0A1B6EES5   B4L8V8   B4LCX1   A0A0M4EF70   B4IXI9   A0A2P8ZKX4   E9FXC0   A0A146M6D2   A0A139WD92   A0A0A9W087   A0A1Y1K4I7   A0A0D6DQD4   A0A158NT66   A0A154P5M4   D8X0C5   E0VX21   K7IMR5   A0A0P6JBF1   A0A0P4XIR1   A0A0N8DLC2   A0A1A9WBR7   A0A1B0AVN2   A0A1B0G378   A0A0P4Y2Z6   A0A1A9YEA7   A0A1A9ZU40   R4FNW0   A0A023F9H9   A0A1B6KQH0   A0A1B6H738   A0A0A9YTJ7   T1J9T3   A0A067R7E3   A0A293LUT3   A0A2Z6DTJ6   A0A2R5L3Y6   A0A2P6KMD5   A0A1J1IP20   A0A2P2I0W2   A0A226ECK5   T1KLJ7   A0A1D2NH69   A0A1E1X3W8   A0A0C9PP08   R7UWL5   T1JMK7   V3ZX17   A0A132AE68   A0A147BLB0   A0A1Y3AZL6  

Pubmed

19121390    26354079    26227816    22118469    25315136    25348373    + More
26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    22936249    17510324    25830018    15632085    25244985    10887159    12364791    14747013    17210077    24495485    26483478    18057021    29403074    21292972    26823975    18362917    19820115    25401762    28004739    21347285    20826532    20566863    20075255    25474469    24845553    27289101    28503490    23254933    26555130    29652888   

EMBL

BABH01014797    BABH01014798    NWSH01007108    PCG63085.1    KQ461137    KPJ08771.1    + More
JTDY01001118    KOB74823.1    AGBW02008703    OWR52744.1    KQ459603    KPI93019.1    ODYU01013035    SOQ59676.1    GAKP01005569    JAC53383.1    JRES01000932    KNC27181.1    GDHF01033205    GDHF01009701    JAI19109.1    JAI42613.1    AE014296    AY119150    AAF47497.2    AAM51010.1    GDHF01027547    GDHF01002704    JAI24767.1    JAI49610.1    UFQS01000016    UFQT01000016    SSW97432.1    SSX17818.1    CM000159    KRK00735.1    CH954178    KQS43065.1    CM002912    KMY96822.1    CH477227    EAT47092.1    GBXI01001362    JAD12930.1    GFDL01013856    JAV21189.1    GDHF01025938    GDHF01001813    JAI26376.1    JAI50501.1    CH379067    KRT07369.1    GFDF01007412    JAV06672.1    BT003499    AAO39503.1    DS231870    EDS41007.1    AF318283    AAK06752.1    KRT07370.1    AAF47499.2    CM000363    EDX08807.1    CH480817    EDW50052.1    EDV50165.1    KRT07368.1    AAAB01008900    EAA09345.5    EAL31289.2    GAMC01000731    JAC05825.1    CH933816    KRG07630.1    CH963847    EDW72807.1    CH940647    KRF84037.1    CH902618    KPU77726.1    JXUM01008344    KQ560258    KXJ83509.1    CH479202    EDW30097.1    OUUW01000009    SPP84854.1    GEDC01014081    GEDC01000907    JAS23217.1    JAS36391.1    EDW17133.1    KRG07629.1    EDW68832.1    CP012525    ALC42852.1    CH916366    EDV96426.1    PYGN01000026    PSN57151.1    GL732526    EFX88294.1    GDHC01003325    JAQ15304.1    KQ971361    KYB25801.1    GBHO01042773    GBHO01042770    JAG00831.1    JAG00834.1    GEZM01098722    JAV53787.1    HF912427    CCV01215.1    ADTU01025614    ADTU01025615    ADTU01025616    ADTU01025617    ADTU01025618    ADTU01025619    ADTU01025620    ADTU01025621    ADTU01025622    ADTU01025623    KQ434823    KZC07245.1    GU475092    ADJ97386.1    DS235825    EEB17927.1    GDIQ01009809    JAN84928.1    GDIP01241270    JAI82131.1    GDIP01022471    JAM81244.1    JXJN01004324    CCAG010013718    GDIP01233382    JAI90019.1    ACPB03005824    GAHY01001134    JAA76376.1    GBBI01000556    JAC18156.1    GEBQ01026292    JAT13685.1    GECU01037275    JAS70431.1    GBHO01007247    JAG36357.1    JH431978    KK852652    KDR19409.1    GFWV01005860    MAA30590.1    LC379651    BBD75288.1    GGLE01000073    MBY04199.1    MWRG01008711    PRD27505.1    CVRI01000057    CRL01904.1    IACF01002005    LAB67678.1    LNIX01000004    OXA55303.1    CAEY01000211    LJIJ01000039    ODN04614.1    GFAC01005462    JAT93726.1    GBYB01002893    JAG72660.1    AMQN01001060    AMQN01001061    KB299137    ELU08332.1    JH431373    KB202953    ESO87170.1    JXLN01013336    KPM09288.1    GEGO01003824    JAR91580.1    MUJZ01049214    OTF73979.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000007151    UP000053268    + More
UP000095300    UP000095301    UP000037069    UP000000803    UP000002282    UP000008711    UP000008820    UP000001819    UP000076408    UP000075903    UP000075884    UP000002320    UP000075920    UP000000304    UP000001292    UP000192221    UP000007062    UP000009192    UP000007798    UP000008792    UP000007801    UP000069940    UP000249989    UP000008744    UP000268350    UP000092553    UP000001070    UP000245037    UP000000305    UP000007266    UP000005205    UP000076502    UP000009046    UP000002358    UP000091820    UP000092460    UP000092444    UP000092443    UP000092445    UP000015103    UP000027135    UP000183832    UP000198287    UP000015104    UP000094527    UP000014760    UP000030746   

PRIDE

H9JC30    Q9W0F1    Q86P37    Q9BML4    Q9W0E9   

Pfam

PF01694   Rhomboid

Interpro

IPR035952   Rhomboid-like_sf        + More
IPR017213   Peptidase_S54_rhomboid_met       
IPR022764   Peptidase_S54_rhomboid_dom       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       

SUPFAM

SSF47473   SSF47473       

Gene 3D

1.20.1540.10    

ProteinModelPortal

H9JC30   A0A2A4ITJ2   A0A194QYU9   A0A0L7LGY2   A0A212FG79   A0A194PJW5   + More
A0A1I8NX50   A0A1I8MIP6   A0A2H1X359   A0A034WHX9   A0A0L0C4L1   A0A0K8VUR5   Q9W0F1   A0A0K8WFH2   A0A336K0V8   A0A0R1DUY6   A0A0Q5U2X0   A0A0J9RM31   Q17K93   A0A0A1XPZ3   A0A1Q3F0Y4   A0A0K8UIK6   A0A0R3P2E6   A0A182YJ12   A0A1L8DJN9   A0A182UPR3   Q86P37   A0A182NLX3   B0WAB7   A0A182WMC0   Q9BML4   A0A0R3P2E2   Q9W0E9   B4QM21   B4HVT7   B3NBB2   A0A0R3P2F4   A0A1W4VVH2   Q7PQ40   Q29FG6   W8CE66   A0A0Q9XRM0   B4MLF1   A0A0Q9WV19   A0A0P9AIQ2   A0A182G922   B4H1C0   A0A3B0JRU6   A0A1W4W7X4   A0A1B6EES5   B4L8V8   B4LCX1   A0A0M4EF70   B4IXI9   A0A2P8ZKX4   E9FXC0   A0A146M6D2   A0A139WD92   A0A0A9W087   A0A1Y1K4I7   A0A0D6DQD4   A0A158NT66   A0A154P5M4   D8X0C5   E0VX21   K7IMR5   A0A0P6JBF1   A0A0P4XIR1   A0A0N8DLC2   A0A1A9WBR7   A0A1B0AVN2   A0A1B0G378   A0A0P4Y2Z6   A0A1A9YEA7   A0A1A9ZU40   R4FNW0   A0A023F9H9   A0A1B6KQH0   A0A1B6H738   A0A0A9YTJ7   T1J9T3   A0A067R7E3   A0A293LUT3   A0A2Z6DTJ6   A0A2R5L3Y6   A0A2P6KMD5   A0A1J1IP20   A0A2P2I0W2   A0A226ECK5   T1KLJ7   A0A1D2NH69   A0A1E1X3W8   A0A0C9PP08   R7UWL5   T1JMK7   V3ZX17   A0A132AE68   A0A147BLB0   A0A1Y3AZL6  

PDB

3ODJ     E-value=0.00610566,     Score=91

KEGG

101739936    K02857 rhomboid-related protein 1/2/3 [EC:3.4.21.105] | (RefSeq) protein rhomboid

GO

GO:0016021   GO:0004252   GO:0036098   GO:0030173   GO:0038005   GO:0005509   GO:0038004   GO:0005794   GO:0006508   GO:0016579   GO:0004674   GO:0006415   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

239

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

107.85242

Exp number, first 60 AAs:

0.01813

Total prob of N-in:

0.99791

inside

1  -  63

TMhelix

64  -  86

outside

87  -  113

TMhelix

114  -  136

inside

137  -  148

TMhelix

149  -  171

outside

172  -  174

TMhelix

175  -  197

inside

198  -  203

TMhelix

204  -  226

outside

227  -  239

 

 

Pi

155.837691

Theta

157.443924

Tajima's D

-1.198904

CLR

1.98754

CSRT

0.102744862756862

Interpretation

Possibly Positive selection