Gene

KWMTBOMO10397

Pre Gene Modal

BGIBMGA007034

Annotation

PREDICTED:_G_protein-activated_inward_rectifier_potassium_channel_3-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr17(-):10036988-10104708      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.877

CDS

ATGTCTGACAAGACCTCATCGTCGGTCGGTCCCCGAAGTTTCGAGACGATTTCGGAGGAGGACGTGACGTCACCCTGGGAGAAACTGTTGGATGATGTTAATACTGCCGTTCCTACTATAATTAAAACTAATGCGTCGAGTGCAACGATTTCAAGAATCGGGGAGGAGGTGTCTACGCACCCCCGAGTCGTGGACTTAGAGGCGAACAAGTTGACGCGCTCCAAGAGTCTCAACCAGCGGAGGAATAGCAGCGGCCTCCTCAGTTCTATCCCCCGGCAGCTGCGGCTCTCTCTCCGTGGCGTTCGCAGTGAACCCTCCAGCGTCAAGGACGTCCCGACAACTAGAAACGATAGTGCCCTCAATCTTCTTCTTAAATACCGTAATGCTCGTTACGCAGCGAGACGTGTGCGGAAGCGCGTCATCTTCAAGCACGGAGACTGCAACGTGGTCCAATGGAACGTGGCTAAGCGCAGGCGCCGATACCTTCAGGACATCTTCACGACCCTCGTGGACGCCCAGTGGCGCTGGACGCTGCTAGTGTTTGCGCTTTCCTTCATCCTCTCGTGGCTCTTGTTCGCACTTATCTGGTGGCTCATTATTTTCACTCACGGAGACCTCACCCCAATTCCACTTACGGAACAGAGAGAACCACCCGTTCCCTGCCTCAACAACGTCAACTCCTTTACTGGCTGCTTCCTCTTTTCTGTTGAAACTCAGCACACCATCGGCTATGGATCAAGGACAACGAATGAAGAATGCCCCGAAGCGATATTCGTCATGTGCATACAAAGTATTGTCGGAGTTTTCATTCAAGCTTTCATGGTTGGGATCGTGTTCGCGAAACTCTCTAGGCCAAAAAAACGCGCTCAAACTCTTCTGTACTCCAGGAACGCCGTAATTTGTTTAAGAGACGGGCAACTGTGTCTGATGTTCCGAGTCGGCGACATGAGAAAATCTCACATAGTCGAAGCTCATATCAGAGCGCAAATCATACGCCGCAAGATAACAAGGGAAGGGGAAGTTTTGCCCTTTTACCAGCAAGAGTTGAAGGTGGGAGCTGATGGCGAAGAAGACAGACTTATGTTTATTTGGCCTATGACCATAGTACACAAGATCAATGAGAAATCTCCGCTATACAATTTGTCAGCGTCGGATATGCTCAGAGAGAGATTCGAGATCGTAGTTATGCTTGAGGGTGTCATAGAGTCAACGGGAATGACAACTCAAGCCCGCAGCAGCTTCTTACCATCAGAAATTCTCTGGGGACATCGTTTCGAGACCATGGTCAAGTTCAGAAAGGATACCGGTGAATATGAGGTTGATTACACGCGGTTTAACAACACATACGAGGTGGACACGCCTTTGTGTTCAGCAAAACAACTAGACGAACTGCGCGCCTCTGTTTCAACTTCACAGAAACTCGATCGCATGCTACCGAAAACATTCTCAAACGACACCCTAGAGCTGAGCTCCATCGATTCGATGTCTTTGGATGAGCACATCGAGATTAAGATTCCGGAATCGAGGGCCCGCGAGAACAGACTGATGGCGCAAACAAACTTTGTACAACACGTCAACGAGAAAAACAAAAACCCAAGTCATCATAACCACTTGGCCGTTGAAAACGGACAAGATTTACTGCACAAGAACACTATAGAGAGTAGAGTCGAAGGAAAGGACAATCATCATATGCACAGAAGTCATAGTCATGCCAGCATGAAGAGGGTTCATGGGCTAATACCGAACGGGATATGCCATCCGATTAGTGGTCATGAACATGTACCCGACGATCATACTCTAAACAAATCCCCGAGTGAAAACTTCATAGGGAAAACTCCAGTGATTCCCATCCTTGTAACGTCACCGGAGGCGGAGCCCGCCTGA

Protein

MSDKTSSSVGPRSFETISEEDVTSPWEKLLDDVNTAVPTIIKTNASSATISRIGEEVSTHPRVVDLEANKLTRSKSLNQRRNSSGLLSSIPRQLRLSLRGVRSEPSSVKDVPTTRNDSALNLLLKYRNARYAARRVRKRVIFKHGDCNVVQWNVAKRRRRYLQDIFTTLVDAQWRWTLLVFALSFILSWLLFALIWWLIIFTHGDLTPIPLTEQREPPVPCLNNVNSFTGCFLFSVETQHTIGYGSRTTNEECPEAIFVMCIQSIVGVFIQAFMVGIVFAKLSRPKKRAQTLLYSRNAVICLRDGQLCLMFRVGDMRKSHIVEAHIRAQIIRRKITREGEVLPFYQQELKVGADGEEDRLMFIWPMTIVHKINEKSPLYNLSASDMLRERFEIVVMLEGVIESTGMTTQARSSFLPSEILWGHRFETMVKFRKDTGEYEVDYTRFNNTYEVDTPLCSAKQLDELRASVSTSQKLDRMLPKTFSNDTLELSSIDSMSLDEHIEIKIPESRARENRLMAQTNFVQHVNEKNKNPSHHNHLAVENGQDLLHKNTIESRVEGKDNHHMHRSHSHASMKRVHGLIPNGICHPISGHEHVPDDHTLNKSPSENFIGKTPVIPILVTSPEAEPA

Similarity

Belongs to the inward rectifier-type potassium channel (TC 1.A.2.1) family.

Uniprot

A0A1E1WV61   A0A1E1W4S6   H9JBY9   A0A3S2NTF0   A0A2H1VCZ1   A0A194R529   + More
A0A194PJV4   A0A212FIV5   A0A0L7LLP7   A0A1L8DEV6   A0A0K8TRY3   A0A0C9QMK3   A0A034VTG3   A0A0Q9X939   A0A1Y1KRQ4   A0A3B0K9A4   A0A1Y1KN94   A0A1Y1KR13   A0A1Y1KT49   A0A075M2J8   A0A1Y1KN86   A0A0Q9WF64   A0A1Q3G1I4  

Pubmed

19121390    26354079    22118469    26227816    26369729    25348373    + More
17994087    28004739    24855023   

EMBL

GDQN01000186    JAT90868.1    GDQN01009071    JAT81983.1    BABH01014775    RSAL01000218    + More
RVE44090.1    ODYU01001885    SOQ38720.1    KQ460685    KPJ12787.1    KQ459603    KPI93009.1    AGBW02008324    OWR53662.1    JTDY01000713    KOB76126.1    GFDF01009095    JAV04989.1    GDAI01000918    JAI16685.1    GBYB01001007    GBYB01001857    JAG70774.1    JAG71624.1    GAKP01013540    JAC45412.1    CH933806    KRG02090.1    GEZM01078207    JAV62860.1    OUUW01000005    SPP80118.1    GEZM01078196    GEZM01078195    JAV62879.1    GEZM01078206    JAV62861.1    GEZM01078203    JAV62865.1    KJ596497    AIF73577.1    GEZM01078205    JAV62862.1    CH940650    KRF83197.1    GFDL01001404    JAV33641.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000009192    UP000268350    UP000008792   

PRIDE

H9JBY9   

Pfam

PF17655   IRK_C        + More
PF01007   IRK

Interpro

IPR040445   Kir_TM        + More
IPR016449   K_chnl_inward-rec_Kir       
IPR014756   Ig_E-set       
IPR013518   K_chnl_inward-rec_Kir_cyto       
IPR041647   IRK_C       

SUPFAM

SSF81296   SSF81296       

Gene 3D

2.60.40.1400    

ProteinModelPortal

A0A1E1WV61   A0A1E1W4S6   H9JBY9   A0A3S2NTF0   A0A2H1VCZ1   A0A194R529   + More
A0A194PJV4   A0A212FIV5   A0A0L7LLP7   A0A1L8DEV6   A0A0K8TRY3   A0A0C9QMK3   A0A034VTG3   A0A0Q9X939   A0A1Y1KRQ4   A0A3B0K9A4   A0A1Y1KN94   A0A1Y1KR13   A0A1Y1KT49   A0A075M2J8   A0A1Y1KN86   A0A0Q9WF64   A0A1Q3G1I4  

PDB

3SPI     E-value=1.36229e-91,     Score=860

KEGG

101739197    K05330 potassium inwardly-rectifying channel subfamily J, other | (RefSeq) G protein-activated inwar

GO

GO:0016021   GO:0034765   GO:0005242   GO:0005244   GO:0006813   GO:0035220   GO:0045475   GO:0042391   GO:0004674   GO:0006415   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

PANTHER

PTHR11767  

Subcellular location

Membrane  

Length:

627

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

47.29982

Exp number, first 60 AAs:

0.0016

Total prob of N-in:

0.85629

inside

1  -  177

TMhelix

178  -  200

outside

201  -  255

TMhelix

256  -  278

inside

279  -  627

 

 

Pi

281.206716

Theta

194.749281

Tajima's D

0.629665

CLR

0.467515

CSRT

0.556922153892305

Interpretation

Uncertain