Gene

KWMTBOMO10396

Pre Gene Modal

BGIBMGA007070

Annotation

PREDICTED:_G_protein-activated_inward_rectifier_potassium_channel_3-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr17(+):10025739-10032072      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.422

CDS

ATGAGAGTGTCTGTCAGTCGTGACCGAAATATTATCAGGCGCGATGCTTCAGGAGGCTTGAGATCATCGAGGGATGGTGGCGCAGACAGTACGCGATTGAGACGCGCGCACGACGCCTGCGCACCAGACTCCGCCATGCACGCCGATCCCGAGTCGCCCTGTTGTCGTGAGGAGACACAGCTGCTCCCCGACGAGTGGCTCAAAGTCAAGACGGTACCCACCAACGGGAACCTATCGCCCGGAGTCTACTATCCAACAGGCAGCAAGAGGAGCCGATCGCACCGGCATGGCGTCACTAGAAGGACTAGACGGAGAGCGATTCTCAAAAATGGAGAGTGCAATATTCTCAAGTCCCGAATCTCTCAGCGGCGTTTGAGATTCCTGCAAGACATGTTTACGACTTTAGTTGACGCACAATGGCGGTGGACCCTCCTTGTTTTCACACTATCGTTTATACTGTCGTGGTTGGGCTTTGCGTTGATCTGGTGGCTGATAGCATTCACACACGGCGACCTGGAACCGGACCACCTACCGCCATTACAGGACTCTGCGAATTGGAAGCCGTGCGTTTTTAACATAAACGATTTCACGTCGTGTTTCTTGTTCAGTATCGAAACGCAGCACACCATTGGCTACGGTGCCCGTACTACAACGGAAGAATGTCCGGAGGCCATTTTCATAATGTGCCTCCAAAGTATCGTCGGTGTGATGATTCAGGCGTTCATGGTCGGTATCGTGTTCGCAAAGATGACAAGACCTAAGCATAGAACGCAGACGTTACTGTTCTCGAAGTATGCAGTCGTGTGTCAAAGAGATGGCGAGTTAAGTTTAATGTTCCGAGTGGGCGACTTGAGGAAATCGCACATAATAGGGGCGAGCGTGAGAGCGCAGTTGATTCGATCGCGGACGACTAAGGAAGGAGAGGTATTGTCGCATTATCAAACCGAATTAGAACTCAACGCAGATGGATGTGACAGCAATCTTTTCTTCATCTGGCCTATTACGATGGTACATAGAATAAATCGCGACAGCCCCTTCTACGGAGTGTCAGCGGCGGACGTACTACAAGAAAGATTCGAAATAGTAGTTATATTGGAAGGAACAATTGAATCGACGGGTCAAACCACACAGGCGCGCTCCAGTTACACAACCAGTGAAATTATGTGGGGGCATAGGTTCGTTCCGCTTGTGACGTACAACCGTGAACGACAAGGATATCAAGTGGATTATTCTAAATTTGACGAGACGACCCAGGTGGACACTCCGCTCTGTTCAGCAAAAGAGCTAGACGAATTTTACGGCAGCCAGGCTGATCGTAGATCTATCGAAAGCGCGGAACATCCACAGCAGCAGTTAATTCTGAAGATGCCGGATAGAGCTCCTACCACCGAACCTAAGGCCGAAAATAAAGACGGCGACTTCACTGTTACGTTGTAA

Protein

MRVSVSRDRNIIRRDASGGLRSSRDGGADSTRLRRAHDACAPDSAMHADPESPCCREETQLLPDEWLKVKTVPTNGNLSPGVYYPTGSKRSRSHRHGVTRRTRRRAILKNGECNILKSRISQRRLRFLQDMFTTLVDAQWRWTLLVFTLSFILSWLGFALIWWLIAFTHGDLEPDHLPPLQDSANWKPCVFNINDFTSCFLFSIETQHTIGYGARTTTEECPEAIFIMCLQSIVGVMIQAFMVGIVFAKMTRPKHRTQTLLFSKYAVVCQRDGELSLMFRVGDLRKSHIIGASVRAQLIRSRTTKEGEVLSHYQTELELNADGCDSNLFFIWPITMVHRINRDSPFYGVSAADVLQERFEIVVILEGTIESTGQTTQARSSYTTSEIMWGHRFVPLVTYNRERQGYQVDYSKFDETTQVDTPLCSAKELDEFYGSQADRRSIESAEHPQQQLILKMPDRAPTTEPKAENKDGDFTVTL

Similarity

Belongs to the inward rectifier-type potassium channel (TC 1.A.2.1) family.

Uniprot

A0A194PIY2   H9JC25   A0A212FIV9   A0A2H1VCZ2   A0A0L7LKP4   A0A194RA99   + More
A0A1E1W6K4   A0A3S2NCQ4   A0A1Q3FNY2   B0XCY9   A0A1Q3FNU5   A0A1S4FL01   Q16XB8   A0A1Q3FUZ4   A0A1Q3FUB8   Q16XB6   Q16XB7   A0A023ES54   A0A1Q3G4Y4   U5EGP0   A0A1Q3G4W8   A0A0L7REX2   A0A1J1IE18   A0A1J1IHJ0   V5G7T8   N6T150   E2BHE4   A0A0N0U587   J3JV45   A0A1Y1NIH2   A0A1Y1NJY8   A0A3L8DEV9   E9IHQ4   A0A158NMU5   A0A182QA82   E2A7T2   A0A195FXP7   V9I7I7   A0A088AR70   A0A026WAU9   A0A151X0B2   A0A151IS07   A0A195C1D6   A0A0C9PH29   A0A182VGL1   A0A1Y9J109   A0A1Y9J0B9   A0A2J7Q3L9   A0A310S9C3   A7UVQ1   A0A1Y9J115   A0A1Y9J0K5   A0A067QNF1   A0A1C7CZS3   A0A182UKL8   A0A2C9GQR0   Q7PKK8   A0A2J7Q3M0   A0A0C9RAJ9   A0A2M4AH79   A0A2M4CNC0   W5JA40   A0A0T6AWB8   A0A182M6E0   A0A1Y9IV43   A0A1L8DF16   A0A2M4BN11   A0A2M4CNA8   A0A1Y9IVK2   A0A084W0M9   A0A232EUK4   A0A182J0B7   A0A2M3ZH10   A0A2M4BN81   T1EA29   A0A2M4BNE8   A0A182JDE4   A0A2M4BR23   A0A2M3Z3W1   F5HMU3   A0A0K8WIH1   A0A1Y9J120   A0A084W0N0   A0A0A1X5V3   A0A0K8V2R8   A0A182TWH8   A0A182TA50   A0A182MQE6   A0A0K8UWX1   A0A1Y9IVW0   A0A182V716   A0A182L8Q7   A0A2C9GQH5   Q7PX91   A0A0A1XQR2   A0A1I8NYM8   W8BA85  

Pubmed

26354079    19121390    22118469    26227816    17510324    24657620    + More
24945155    23537049    20798317    22516182    28004739    30249741    21282665    21347285    24508170    12364791    14747013    17210077    24845553    20966253    20920257    23761445    24438588    28648823    25830018    24495485   

EMBL

KQ459603    KPI93008.1    BABH01014775    AGBW02008324    OWR53664.1    ODYU01001885    + More
SOQ38719.1    JTDY01000713    KOB76123.1    KQ460685    KPJ12786.1    GDQN01008428    JAT82626.1    RSAL01000218    RVE44089.1    GFDL01005823    JAV29222.1    DS232728    EDS45184.1    GFDL01005841    JAV29204.1    KF686746    CH477543    AIN76714.1    EAT39258.1    GFDL01003615    JAV31430.1    GFDL01003851    JAV31194.1    KF686745    AIN76713.1    EAT39257.1    KF686744    AIN76712.1    EAT39256.1    GAPW01001525    JAC12073.1    GFDL01000192    JAV34853.1    GANO01003364    JAB56507.1    GFDL01000195    JAV34850.1    KQ414608    KOC69364.1    CVRI01000047    CRK98501.1    CRK98502.1    GALX01002281    JAB66185.1    APGK01057039    KB741277    ENN71258.1    GL448287    EFN84913.1    KQ435791    KOX74402.1    BT127111    KB630626    KB631617    KB631850    AEE62073.1    ERL83730.1    ERL84721.1    ERL86721.1    GEZM01004174    JAV96445.1    GEZM01004173    JAV96446.1    QOIP01000009    RLU18987.1    GL763289    EFZ19901.1    ADTU01002433    ADTU01002434    ADTU01002435    ADTU01002436    ADTU01002437    AXCN02001514    GL437384    EFN70512.1    KQ981200    KYN45082.1    JR035661    JR035662    JR035663    JR035664    JR035665    JR035666    JR035667    JR035668    JR035669    JR035670    JR035671    JR035672    AEY56573.1    AEY56574.1    AEY56575.1    AEY56576.1    AEY56577.1    AEY56578.1    AEY56579.1    AEY56580.1    AEY56581.1    AEY56582.1    AEY56583.1    AEY56584.1    KK107320    EZA52801.1    KQ982617    KYQ53796.1    KQ981113    KYN09394.1    KQ978350    KYM94689.1    GBYB01000163    JAG69930.1    NEVH01019065    PNF23184.1    KQ767621    OAD53388.1    AAAB01008987    EDO63275.2    KK853134    KDR10854.1    APCN01000829    EAA43222.5    PNF23185.1    GBYB01003841    JAG73608.1    GGFK01006647    MBW39968.1    GGFL01002636    MBW66814.1    ADMH02002066    ETN59720.1    LJIG01022677    KRT79300.1    AXCM01007933    GFDF01009053    JAV05031.1    GGFJ01005329    MBW54470.1    GGFL01002581    MBW66759.1    ATLV01019123    KE525262    KFB43773.1    NNAY01002130    OXU21996.1    GGFM01007085    MBW27836.1    GGFJ01005331    MBW54472.1    GAMD01000792    JAB00799.1    GGFJ01005330    MBW54471.1    GGFJ01006368    MBW55509.1    GGFM01002458    MBW23209.1    EGK97615.1    GDHF01001363    JAI50951.1    KFB43774.1    GBXI01007785    JAD06507.1    GDHF01019449    JAI32865.1    GDHF01021228    JAI31086.1    EAA01723.5    GBXI01001394    JAD12898.1    GAMC01019801    JAB86754.1   

Proteomes

UP000053268    UP000005204    UP000007151    UP000037510    UP000053240    UP000283053    + More
UP000002320    UP000008820    UP000053825    UP000183832    UP000019118    UP000008237    UP000053105    UP000030742    UP000279307    UP000005205    UP000075886    UP000000311    UP000078541    UP000005203    UP000053097    UP000075809    UP000078492    UP000078542    UP000075903    UP000076407    UP000235965    UP000007062    UP000027135    UP000075882    UP000075902    UP000075840    UP000000673    UP000075883    UP000075920    UP000030765    UP000215335    UP000075880    UP000075901    UP000095300   

PRIDE

H9JC25   

Pfam

PF17655   IRK_C        + More
PF01007   IRK

Interpro

IPR014756   Ig_E-set        + More
IPR041647   IRK_C       
IPR016449   K_chnl_inward-rec_Kir       
IPR013518   K_chnl_inward-rec_Kir_cyto       
IPR040445   Kir_TM       

SUPFAM

SSF81296   SSF81296       

Gene 3D

2.60.40.1400    

ProteinModelPortal

A0A194PIY2   H9JC25   A0A212FIV9   A0A2H1VCZ2   A0A0L7LKP4   A0A194RA99   + More
A0A1E1W6K4   A0A3S2NCQ4   A0A1Q3FNY2   B0XCY9   A0A1Q3FNU5   A0A1S4FL01   Q16XB8   A0A1Q3FUZ4   A0A1Q3FUB8   Q16XB6   Q16XB7   A0A023ES54   A0A1Q3G4Y4   U5EGP0   A0A1Q3G4W8   A0A0L7REX2   A0A1J1IE18   A0A1J1IHJ0   V5G7T8   N6T150   E2BHE4   A0A0N0U587   J3JV45   A0A1Y1NIH2   A0A1Y1NJY8   A0A3L8DEV9   E9IHQ4   A0A158NMU5   A0A182QA82   E2A7T2   A0A195FXP7   V9I7I7   A0A088AR70   A0A026WAU9   A0A151X0B2   A0A151IS07   A0A195C1D6   A0A0C9PH29   A0A182VGL1   A0A1Y9J109   A0A1Y9J0B9   A0A2J7Q3L9   A0A310S9C3   A7UVQ1   A0A1Y9J115   A0A1Y9J0K5   A0A067QNF1   A0A1C7CZS3   A0A182UKL8   A0A2C9GQR0   Q7PKK8   A0A2J7Q3M0   A0A0C9RAJ9   A0A2M4AH79   A0A2M4CNC0   W5JA40   A0A0T6AWB8   A0A182M6E0   A0A1Y9IV43   A0A1L8DF16   A0A2M4BN11   A0A2M4CNA8   A0A1Y9IVK2   A0A084W0M9   A0A232EUK4   A0A182J0B7   A0A2M3ZH10   A0A2M4BN81   T1EA29   A0A2M4BNE8   A0A182JDE4   A0A2M4BR23   A0A2M3Z3W1   F5HMU3   A0A0K8WIH1   A0A1Y9J120   A0A084W0N0   A0A0A1X5V3   A0A0K8V2R8   A0A182TWH8   A0A182TA50   A0A182MQE6   A0A0K8UWX1   A0A1Y9IVW0   A0A182V716   A0A182L8Q7   A0A2C9GQH5   Q7PX91   A0A0A1XQR2   A0A1I8NYM8   W8BA85  

PDB

3SPI     E-value=2.15543e-99,     Score=926

KEGG

101739050    K05330 potassium inwardly-rectifying channel subfamily J, other | (RefSeq) G protein-activated inwar

GO

GO:0005242   GO:0034765   GO:0016021   GO:0006813   GO:0005244   GO:1990573   GO:0004674   GO:0006415   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

PANTHER

PTHR11767  

Subcellular location

Membrane  

Length:

478

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

46.1505000000003

Exp number, first 60 AAs:

0

Total prob of N-in:

0.99733

inside

1  -  143

TMhelix

144  -  166

outside

167  -  223

TMhelix

224  -  246

inside

247  -  478

 

 

Pi

262.448885

Theta

219.045867

Tajima's D

0.807667

CLR

0.002938

CSRT

0.603169841507925

Interpretation

Uncertain