SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10392
Pre Gene Modal
BGIBMGA007036
Annotation
PREDICTED:_serine/threonine-protein_kinase_ATR_[Bombyx_mori]
Full name
Serine/threonine-protein kinase ATR      
Alternative Name
Ataxia telangiectasia and Rad3-related protein homolog
Meiotic protein 41
Location in the cell
Nuclear   Reliability : 1.917
 

Sequence

CDS
ATGGAAGATGACTACCAGGATGGACCATTCACAGTGTGGCAAAAGCTTAATGAACCTACTGTGGTTTTATTTAATAATCTAGAACATGCTGTAGATGGGCTGGACCGATTAATAACATCAATTTTAAAATTTTCTGGAGATTTTTCAGAGGATTTAGTTCCAAGAGTTGGTTACGAAAAATACCCTGAAGTCTACTATAGTGCATTTAATACATGGTTAATTGGAAGGCTATTTTACATTTGGTCAGAGGAATACCTTCTTAGAATACACACAGCAAGTAAAGATGCTCAGTTAAAAATATTGAACATATTATGTATTGTTAAGAATTATAAGACTGTTGGCATTGCCAAATTTCAATATATTTTTGCTGACGAATTCAGAGAAGTGCTAAATTGTCTAGAAGCTATTGTTCACTCCTTAGAAAATTTCTATGAGCAAGGTGAAATAGACAATATCTACATTAAAGATATAAATAAAGAGAAAATGAATTTTAAAAGTGAAGTTATTGAACTATGTCCCTTGTTACAATTAAACAAAACATATTCAGCAAGTAGATTAATTGGAGATGTTTTAATGCCATGTTTCCTAAGTAAGGATCACCACATACAGGCACAAGAAGACATATCAACATCTTCTAATCAATCCACAATAGCTGGTTTACAGTCTTTATTGATAAAATTTTTGAATTACAAGCAGTATGTTGATATGAAAAATGTGGGTGTTTGGAATCTTCTGCAATGCTTGAGTTTTCATTTTGATGTATTCAAATATAACGGCCCAAAAGAACTAATTTGTGAAGAAAATATTGAGTCAATTTTGGAAGTATTTAAACCATTTAATGAGGATTTGCAGGACAATGATGAAGAGTTGAATTCACGGAAGGATGTGTTTTTTATTACAAGTGTAAATTTACTTGCAAGTTATACAAAATCTAGTTTGGAGAGCAATAACCTTGGGAATCAAACAAAAGCTCTAAATATGATAGTAGATTTAGGAATGTGCCGAAATGAAAAAGTTATTTTGCCCACAACTAAATTATTGATCTATTTTATAATGCATCCCCAATGTCCTGTTGGACCTAAAGCCGTTGTGTATTTGAGAGATATCTGTGAAGCTCATGAATATACTTCAAACCAGGTTTACCACAGATATAAAAAAGACTACTGTCGCCTTTTTGTTGAATGCAGCTTATATAATGGGAAAGATTTCGCCTTGGCCCTTTCCAAAGTTGTTAGGGCATTTGGATTCGTTGGTTACCGCGATTTTATATCAAAAGATGTTCGCCATTTCCTTCCTTATCTGATGCCTTACTCTGTGACCATCAAAGAAGTGCCTTCAATGATTGAAGAATTTGCATCTTTAGTGCAGTTTCCTGTTTCGGATTTTTTGATCAAGAGCTTTGCTCATATTTATGTTTACCTTTATTTGAATGAAACGGATTCCGTCTCGTCTAAATGCTACAAAATTATCGAAAGATTAACGAAAACTACAATATCTAATCTAATAAATAAGCATTTCAGAATAATACTGACAGAGTTTTTGTTGCAATACTGTTCTTGTCCTGAAAAAGTACTAAACGCGTGTAGGTACCTAGCATGCCACGATCCTGATGTGTCTACTCCGACTGGTACAATGAGTATGAGTACCTCTCAAATAGCCGACTTCTTAAATCCAAAGTTCTTAGGAGTGTTGGCTTACTTTGATCACAATTTAGTCAATGCTAAAGTAGCGCAATCTGTAAAAAGGAAAGCGTTAAAAAGCTTTCCCGATATAATGCAATTAATGGGTGTGAAATACATAACCCCTCTGCGTTTCAAAGTTTTAGCGACGCTGCGATCGGCCTTGCCGTTGGCTAAAGAATATCCCAACATTTTAGCTGAAGCTTGGAGTGCTTTTATACATCAAATTGATAGTGCTGCATTAGGGCCTTTGTTATCGAATTTAGCAGTATCATTACTCCAGCAAATTGAATACGCACGCCAAGAAGTAAACCAGATCTTTCATTATCTGGTCATAAATAACGAAAATTTACTTAGCCGCCACATATCTGATCTGTTCTTTGTAGAAGATACCCAAATATCAGATAGGATAAAAACAGTAATCAAAATGCACGTAAAAAGGACTCAGCCTGACGGATTCCTGGACAAAATTGAATGGTATCTTAATCAACTTAATCAGAACATTCCAATGATTAAAGTGTACACTTTTAAACATTTAAACAAATTGTTGAAGAATAATCGAACGGAAATTCATAAAGCTATATTTGGTGGGAAAAACATAGATCCCGTCATCGTGAATCTAATGGACTCTTTATTGATGGGCTGTAAAGACACAGATCCTCAAGTGAGCGAAGCCAGCGGTTCTTGTTTAGGGCAGCTAGGCGCAATAGAAGCGGGACACTTACCACGTCAATATGTAAAACCAGACAAATCGCCTTTTGCCTTCTCCATAGTAGACGATTGTTTTACTACAGCCGCTTTAATGGAACTTACTAGAGCTTTTCAGTATGAAAAGGACACTAAGAATATGGATTGCTACGCATTTACCATTCAGGAGATATTAAAGATTTATGATATATCACCTTATGGAAAGAAAAGGGATGTTTGGAACAGTTTCCCCGAAAACAAGCATCAAATTATGTATCCTTTGCTCAGTTCAAGGTATATGTTAACAAATCCATCGCAACCCGAAAAAACACATCCGCTTTTCGGTTCTTCTTACGCAACCACATTTCTCGAATGGGCGCACAATTGGGCGGCTCAGCTGATTCCGCTTATTGAGACTGACAGCGTCCGCGAATTATTGCGCAAAGTACATCCAAGCCTAAAGTATGACGTCAGCACTTTATTCCTGTTCCTACCCTATGTGTTGCTCCACGCTGTCATGTTCAAAGCAAACCACCAGTATATACAGGAAGAAATGATGGCTGTCATCGGTTTGGACAATGTTGAACAAATAGATGAAGTAACAGAACGTTCTAAGCACGGAATGTTGCGACACATCAGAACGACACCCAGTATTGGCACAGTACAAGCTGAAGAAGGAAATGAGAGTAAATGCAGCAAGACTACTTACGCGTTATTGGATTTCCTGAATAGATGGCTCTTGGAATGGGCTCATTCAAAACAAGGATCACTGGAGCACGATAATTATAAAACTATAAATTCGTTTGTCAAAAAATTCAATAAGCTCACAATAGCCCGTGGAAAATTCGCTTGCGGCGAATTAGAGAGGGCGTTACAATACTTGGAGTTGTATATAGAGGAAACCGATCGAATGCAAGAACAATTGCCTTTCATGGCTGAAATATACGCGTTATTAGACGAACCGGACTCTATTGCTGGTATAGTTTCTCTGAAGAGATCAGAGCCGTCGTTGAAAGAATTAATTTTAGTTCAGGCAGTGACAGGTCGTTTGCAAGACGCCGCATTATGTTACGAACGTATTGCCCAAGAGGGACAGTTGGACAGATCCAGTCTACAGGGTATGATAGACTGCTATCTAGGCTTAGATCAGCCGTTCACGGCGTACCGCTTGATAAGCGAGCACGAAGCTGAAGATATGACGGAACTAGCTGCGGAGCCGCTCTGGCGATTGGGACGCTTCGAGCAGCTCGAGGAGCTGGTCAGCCAACCTGTGCCAATTTGCAAAGAAAACTGGGGTGTGGTCATGGGTCGATTGCTACTAGCGTACAGGAAACAAGATCACGACAACTTCGTTGTGTGTTGCAAAGACGCTACCGTGAGATTGTTAGCGCAAATGGACGGCGAGAGCAAAGGCGAGAGCGCATTGCGGAGCGGCTACCAGAGCGTGCTCGGACTCCACATAGTTACTGAAGTCGAACACGCTGAGGAGGTTCTACGCAGGCTGAAAGAGTTGCAAGACGGGGATAGACGGAGCAATGTAATCATAAATCAGTTGTTAGACGAATGGCGTCGTCGTATTTCGGTTGTGCAGTCCGACGTACGAACCATCGAACCCTTGTTGAGGTTGAGAAGAATTGTTTTACAGCAAGCGAAGGAGATCCTCGAACCAAGTCATCCGATGACCGCGAATACGTTGAAATCGTTTATAGGTGACCTGTGGCTGCAGAGTGCGAAGCACGCGAGGAAAGCTGGTATTTTCCAACAGGCCTACATGTATATATTGAATGCCGAAGAATACCATCCCGAGGAATTGTTTATTGAAAAATCTAAAATGTACTGGGCCCGCGGACAGAACGAGCAAGCGTTCATAACGTTGAGGCGCGGCCTTGAAGACTCTTATCCCGCTATTGAAACGCTTTCCAAGGAACAGAGAAAAATATGCGCCAAAGCCAAACTGCTGATAGCGAAATACAACGACGAAACCTCAAACGTCGACGTAGATGTCAATATCGGGTACTACAAAGAGTCAGTGGAAGTTTTCAATCAATGGGAAAAAAGTTTGGTAAGTTTGGGCGCCTACTACGAGAAGGTGAGCAGCAGTGAGACCGTAAAGTCTCCTACGGAAATGTGGGCGCGCCGTACACTAGCACTGAATAGCTACGGGAAAGCTTTGCAATACGGCCATAAGTATTTATATCAGAGCATGCCGCGGATGTTGTCTATATGGCTCGACGTTGAGGTGACGGCGTCGGATTCTAGCATGCACTCAGTATTGGCTGAAATGACAGACATCATCAAGAGTTATTCGGAGCGATTACCTCTGTATCTTTATTTGACGGCCTTCTCGCAGATCGTATCAAGGATATGTCATCCCGTCCAAGAGGTTTACAAACAATTAAAAGCGATAATAGTGAAGTTGATAAAGGCGTATCCGCATCACGCGCTTTGGATGATGATGTGCGTGATGAAGTCCGGCTACCCGCAGCGCAAGAAGCGGTGCGCGGACGTGTTCTCTGAGCCGGCGCTGCGCGACGGGGCGCTCGTGCGGCTCGTCGGCGACTTCACGCTGCTCGCCGAGAGACTCATCGAGCTCTGCAACAAGCCCATCGCCGGAAACGCGTCGACCACTACAGTCTCGAGCTTGGTACGATCGTTACCCGTTTGTCTAACAAATGGAAAATTCAGCCACATTATGATGCCGTTCCAAGATTTCTGCAAGATAGTACTACCTTCAAAAGCAGCCAGACAAGAAAGACTCGACTTCAACATACCCACGGAACCGCCGGTTTACATAGCCGGGATAAAAGAACATATAAGTATATTACCGTCCCTACAGAAGCCTAGGAAAGTGACGTTAATAGGGTCAGACGGAAAAGATTACATAATAATGCTGAAGCCTCGTGACGACCTTCGCAAGGATTATCGATTGATGGAATTCAACGGAGTGGTGAACCGGTTCTTGCAAGATGCTCCCGAAACACGCAAACGTCGCCTGTACATCCGCACGTACTGCGTCCTGCCGCTTAACGAGGAGTGCGGACTCATTGAATGGGTACCGAATCTCGTTGGCTTAAGGCCTATATTGATACACATTTACAAGCAAAAAGGTATGCACACTAGTAATAAAGAATTAAAGGAGATGATGTGCACAACTAAAGATCCCGTTGAAAAGAAAAGGAGAATATTCGAAGATCAACTGCTACCTCGTCATCCTCCAGTCCTCCAAGAATGGTTCAGAGGTGTATTTTCGGATCCTTATGGATGGTATCAAGCCAGATCGGCGTACATAAGGACGGCTGCAGTTATGTCTATGGTCGGATATATTTTAGGTTTGGGCGATCGTCACGGAGAGAACATATCCTTCGATTCGACGAATGGCGACACCGTGCACGTTGATTTCAACTGTTTGTTCAACCGAGGGGAGAGGTTCGAATGGCCCGAGAGAGTGCCCTTCAGATTGACTCACAACATGGAGGCCGCTATGGGTCCTCTGAAACACGAAGGAATGTTCAGGAAGAGCTGCGAAGCCGTAATGCGGGTGCTGCGCTCGCAAACGGCCGCCCTGATGTCCGTCATAGATCCGTTTGTGTACGACCCGCTCGTGTCGTGGGGGCGCGCCAACCGGGCACCGGACTGCGGGGAGCGGACCAACGAGCAGGCCATGCAGCATCTGCAGCAAATACGGCAGAGACTCAACGGAATGGTGAGAACAAAGAACAAACAACCGTCACTCTTATCTCCAGAGGGACAAGTGGAGCATCTTATCGTCGAGGCCACCAGCATACACAATCTATGCCAAATGTACATCGGATGGGGACCGTTTTTGTAA
Protein
MEDDYQDGPFTVWQKLNEPTVVLFNNLEHAVDGLDRLITSILKFSGDFSEDLVPRVGYEKYPEVYYSAFNTWLIGRLFYIWSEEYLLRIHTASKDAQLKILNILCIVKNYKTVGIAKFQYIFADEFREVLNCLEAIVHSLENFYEQGEIDNIYIKDINKEKMNFKSEVIELCPLLQLNKTYSASRLIGDVLMPCFLSKDHHIQAQEDISTSSNQSTIAGLQSLLIKFLNYKQYVDMKNVGVWNLLQCLSFHFDVFKYNGPKELICEENIESILEVFKPFNEDLQDNDEELNSRKDVFFITSVNLLASYTKSSLESNNLGNQTKALNMIVDLGMCRNEKVILPTTKLLIYFIMHPQCPVGPKAVVYLRDICEAHEYTSNQVYHRYKKDYCRLFVECSLYNGKDFALALSKVVRAFGFVGYRDFISKDVRHFLPYLMPYSVTIKEVPSMIEEFASLVQFPVSDFLIKSFAHIYVYLYLNETDSVSSKCYKIIERLTKTTISNLINKHFRIILTEFLLQYCSCPEKVLNACRYLACHDPDVSTPTGTMSMSTSQIADFLNPKFLGVLAYFDHNLVNAKVAQSVKRKALKSFPDIMQLMGVKYITPLRFKVLATLRSALPLAKEYPNILAEAWSAFIHQIDSAALGPLLSNLAVSLLQQIEYARQEVNQIFHYLVINNENLLSRHISDLFFVEDTQISDRIKTVIKMHVKRTQPDGFLDKIEWYLNQLNQNIPMIKVYTFKHLNKLLKNNRTEIHKAIFGGKNIDPVIVNLMDSLLMGCKDTDPQVSEASGSCLGQLGAIEAGHLPRQYVKPDKSPFAFSIVDDCFTTAALMELTRAFQYEKDTKNMDCYAFTIQEILKIYDISPYGKKRDVWNSFPENKHQIMYPLLSSRYMLTNPSQPEKTHPLFGSSYATTFLEWAHNWAAQLIPLIETDSVRELLRKVHPSLKYDVSTLFLFLPYVLLHAVMFKANHQYIQEEMMAVIGLDNVEQIDEVTERSKHGMLRHIRTTPSIGTVQAEEGNESKCSKTTYALLDFLNRWLLEWAHSKQGSLEHDNYKTINSFVKKFNKLTIARGKFACGELERALQYLELYIEETDRMQEQLPFMAEIYALLDEPDSIAGIVSLKRSEPSLKELILVQAVTGRLQDAALCYERIAQEGQLDRSSLQGMIDCYLGLDQPFTAYRLISEHEAEDMTELAAEPLWRLGRFEQLEELVSQPVPICKENWGVVMGRLLLAYRKQDHDNFVVCCKDATVRLLAQMDGESKGESALRSGYQSVLGLHIVTEVEHAEEVLRRLKELQDGDRRSNVIINQLLDEWRRRISVVQSDVRTIEPLLRLRRIVLQQAKEILEPSHPMTANTLKSFIGDLWLQSAKHARKAGIFQQAYMYILNAEEYHPEELFIEKSKMYWARGQNEQAFITLRRGLEDSYPAIETLSKEQRKICAKAKLLIAKYNDETSNVDVDVNIGYYKESVEVFNQWEKSLVSLGAYYEKVSSSETVKSPTEMWARRTLALNSYGKALQYGHKYLYQSMPRMLSIWLDVEVTASDSSMHSVLAEMTDIIKSYSERLPLYLYLTAFSQIVSRICHPVQEVYKQLKAIIVKLIKAYPHHALWMMMCVMKSGYPQRKKRCADVFSEPALRDGALVRLVGDFTLLAERLIELCNKPIAGNASTTTVSSLVRSLPVCLTNGKFSHIMMPFQDFCKIVLPSKAARQERLDFNIPTEPPVYIAGIKEHISILPSLQKPRKVTLIGSDGKDYIIMLKPRDDLRKDYRLMEFNGVVNRFLQDAPETRKRRLYIRTYCVLPLNEECGLIEWVPNLVGLRPILIHIYKQKGMHTSNKELKEMMCTTKDPVEKKRRIFEDQLLPRHPPVLQEWFRGVFSDPYGWYQARSAYIRTAAVMSMVGYILGLGDRHGENISFDSTNGDTVHVDFNCLFNRGERFEWPERVPFRLTHNMEAAMGPLKHEGMFRKSCEAVMRVLRSQTAALMSVIDPFVYDPLVSWGRANRAPDCGERTNEQAMQHLQQIRQRLNGMVRTKNKQPSLLSPEGQVEHLIVEATSIHNLCQMYIGWGPFL

Summary

Description
Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates various proteins, which collectively inhibits DNA replication and mitosis and promotes DNA repair and recombination. Phosphorylates grp/CHK1. Phosphorylates 'Ser-137' of histone variant H2AX/H2AV at sites of DNA damage, thereby regulating DNA damage response mechanism. Essential for the DNA damage checkpoint in larval imaginal disks and neuroblasts and for the DNA replication checkpoint in the embryo. Has also an essential role during early nuclear divisions in embryos, where it is required to delay mitosis in response to incomplete DNA replication. Also plays an important role during meiosis, where it may monitor double-strand-break repair during meiotic crossing over, to regulate the progression of prophase I, and to enforce metaphase I delay observed at the end of oogenesis.
Catalytic Activity
ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]
ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]
Cofactor
Mn(2+)
Subunit
Interacts with mus304.
Similarity
Belongs to the PI3/PI4-kinase family.
Belongs to the PI3/PI4-kinase family. ATM subfamily.
Keywords
ATP-binding   Complete proteome   Developmental protein   DNA damage   DNA repair   DNA-binding   Kinase   Manganese   Nucleotide-binding   Nucleus   Phosphoprotein   Reference proteome   Repeat   Transferase  
Feature
chain  Serine/threonine-protein kinase ATR
EC Number
2.7.11.1
EMBL
BABH01014763    BABH01014764    BABH01014765    BABH01014766    KQ459603    KPI92992.1    + More
AGBW02008324    OWR53666.1    KQ460328    KPJ15649.1    RSAL01000218    RVE44087.1    FX985839    BBA93726.1    KQ971361    KYB25791.1    KQ414615    KOC68701.1    KQ435711    KOX79522.1    KB632399    ERL94616.1    GEZM01073296    JAV65175.1    KZ288340    PBC27755.1    CH477636    EAT38000.1    JXUM01099673    JXUM01099674    JXUM01099675    KQ564510    KXJ72154.1    QOIP01000001    RLU26750.1    GL887802    EGI70018.1    GFDL01014940    JAV20105.1    KK107087    EZA59955.1    KQ434796    KZC05824.1    KQ976716    KYM76820.1    ADTU01002214    ADTU01002215    ADTU01002216    ADTU01002217    ADTU01002218    GL443930    EFN61462.1    DS231847    EDS36403.1    AJWK01022514    KQ981805    KYN35646.1    KQ978344    KYM94834.1    KQ981042    KYN10085.1    KQ982431    KYQ56485.1    GL449798    EFN81969.1    AAAB01008985    EAA15175.4    APCN01006606    UFQS01001061    UFQT01001061    SSX08766.1    SSX28678.1    GBXI01016982    JAC97309.1    JRES01000772    KNC28437.1    GDHF01021381    GDHF01011602    JAI30933.1    JAI40712.1    GAMC01007176    JAB99379.1    GGMR01013025    MBY25644.1    GFXV01006301    MBW18106.1    ABLF02010940    DS234988    EEB09875.1    JXJN01002755    JXJN01026254    CCAG010002137    GEDC01023527    JAS13771.1    GL732560    EFX77801.1    CH933807    EDW13139.2    RQTK01000227    RUS83841.1    EFX77802.1    CH916372    EDV99351.1    CH940649    EDW64463.1    CM000162    EDX01915.1    U34925    AY282465    AE014298    CH902619    EDV36459.1    GDIQ01030349    JAN64388.1    GDIQ01020764    JAN73973.1    CH954180    EDV46872.1    GDIP01005469    JAM98246.1    LRGB01002076    KZS09380.1    AAGW02015209    AAGW02015210    OUUW01000001    SPP72878.1    CH379064    EDY72758.2    CH479200    EDW29656.1    LSYS01004732    OPJ79101.1    NEDP02004329    OWF45999.1    OPJ79100.1    KL448071    KFO79887.1    KK709768    KFQ32579.1    KN124268    KFO21862.1   
Pfam
PF02259   FAT        + More
PF00454   PI3_PI4_kinase
PF08064   UME
PF02260   FATC
PF00675   Peptidase_M16
PF05193   Peptidase_M16_C
PF16187   Peptidase_M16_M
Interpro
IPR036940   PI3/4_kinase_cat_sf        + More
IPR012993   UME       
IPR016024   ARM-type_fold       
IPR003151   PIK-rel_kinase_FAT       
IPR000403   PI3/4_kinase_cat_dom       
IPR018936   PI3/4_kinase_CS       
IPR011009   Kinase-like_dom_sf       
IPR014009   PIK_FAT       
IPR003152   FATC_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR011011   Znf_FYVE_PHD       
IPR007863   Peptidase_M16_C       
IPR011765   Pept_M16_N       
IPR001431   Pept_M16_Zn_BS       
IPR032632   Peptidase_M16_M       
IPR011249   Metalloenz_LuxS/M16       
IPR011989   ARM-like       
IPR019734   TPR_repeat       
IPR013026   TPR-contain_dom       
IPR021133   HEAT_type_2       
SUPFAM
SSF48371   SSF48371        + More
SSF56112   SSF56112       
SSF48452   SSF48452       
SSF57903   SSF57903       
SSF63411   SSF63411       
Gene 3D
PDB
5YZ0     E-value=0,     Score=2517

Ontologies

Topology

Subcellular location
Nucleus  
Length:
2064
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.256130000000001
Exp number, first 60 AAs:
0.00022
Total prob of N-in:
0.00421
outside
1  -  2064
 
 

Population Genetic Test Statistics

Pi
201.890514
Theta
172.840048
Tajima's D
-1.167815
CLR
1.585339
CSRT
0.110494475276236
Interpretation
Uncertain
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