Gene
KWMTBOMO10390
Annotation
reverse_transcriptase_[Danaus_plexippus]
Location in the cell
Nuclear Reliability : 1.247
Sequence
CDS
ATGCGCTCTGCGCTCGCCAGCGACTCGGGTGCGATCAACCCCACCAGATCATCGGCGGGGAAAAAGAGGAGGCGAAAGAAGACCCCATTACAAACTTCCGACGATGGCGGTGCGTCATCCTCCAGCATCGAGGTGCCGGAAAAGACGATGGCTGTCGAGGAGGTGGTTCCGGTGGTTTCGGGGCCTGCCACGTCGGAAGATATGATGCCTGCTCCCCAGTGGGCACCAGTAAGGAGGAGGGGCGCGGTGTCACCGGCGACGTCGGTGGAGTCTATATCGACGTCGGCCGCATCCCTGGCTAGCGGGGATGAAACATTCCGCGACCTTGACCTTGCGCTGGTGAATCTGGGCAAGCTGCTGTCGACCGTGGCTGCCAAGGGCGCCGAGCCAGGCAGCAGCTACCGAAAAAGGCTTCGAGAAGGAGCCGCTATGGTTAAGACGAGGCTGATCCCCACTATGTCTAAGCTGTATAACTTGGTGGCGAGCCGGGAAGGGGATAAAAAAGGTCTCGTCGCGCAGCTTGACCCCAGGGAGAAGGCGATGGACACCGACGTGCCCTCGCGGGCCGCGAAGAGTGTGCCGGCACCCATGCCAGTGCCCACCCCTGTGGCCTCTATTCCTCGAGCACCTACGTCTGCGCTTTCTCGCCCCCCGCGGAGGGTTGAGTTAAGGCCTGCGCTGCCTCCCCGGATATCGGCCGCCCCTGCATCCGTGCAGAGAGGAGTGCAACGGCCTGCGCCAGCACAAACGGAGGACATCCGTTCGCCACTGGCGAGGATGGTGGACGAGTGGCCAGCACTGCCGCGGCCCAGATCTACAGAGCCGTCTCTTTCGGCCCCGCGTGCCGTGGGGCCACAGAGTCCACACTACGTGGCTGCTGGTATGCGGGAGGTGAACAATTCCCTCCCAAGCAAAGAGGAAATGGTGGCCTGCATTTCGCGGGCGGTGGCAGTAGAGGTCGGAAAGCACTTTGCCAGCCTTGAGGAGATGCTCCGCTCCTCGGTTGATTCCGGAGTCTGCGTCCTGGCGCCAAAAGCCGCAGCCGCCCCGCGCGACCAATCCACTCGGCCGACCTCTGCCTTTACCCCCTCTGCGAGGGTGGTACAGCGTGGAGGCCGAAACCAGAACAGTAGGGCTGCGGGTGCTCCGCGATCCCAACCACAGTCTCGTTCCCTTCCTCCTCCTCCGTCAAACATGGACGAGGGCTGGACGGAAGTGAGCACCGGCCGCCAGCAAGAAGAAAAGAGAAAGGAAGAAGCCGTCGTAGTGACGTTGCTGCCGGCCGCCGCCGAAAAGGGCCTCACCTATGATGAGGTGATGGCCCGGGCGCGCGCGGCCGTAAATTTGGAAGAAATCGGGGCGGAGGAGGGTCTGCGCTTCCGGCATACCGCCAATGGGGCGAAGCTGCTGGAGTGTCCCGGTGCCAATAGTTCTGGCATCGCAGACAAACTAGTAGCGACGCTCCGCGTGGCACTGCCGGAGGAAGACGTGCGCGTGCACAGGCCGGTGAGGATGGCTGAGATTAGGATCACCGGCCTGGACGATTGCGCCACCAGGGAGGAGGTGGCAGCTGCGATAGCCGCCCAAGGTGGATGTGCCCCGGAGAGCGTGACCGTGGGTGAACTCCGCTCAGGGTACTCCGGGGCCAGGTCGGCGTGGGCGCGCTGCCCTGTGGAGGCTGCCACCTTCTTAGCCACTCCTCCGCCGGGAAGATCGACGGGGGATCCGGGGAGACTGCGCGTGGGCTGGATAGCGGCCCACGTGCGTCTCCAAGAACCGCGTGCCTGGCGATGCCTTCGGTGCTTTAGTACCAGACACGGCCTCGCCAGGTGCACCAGCTCGATTGACCGCAGTGGTCTGTGTTTCCGCTGCGGCCAGCCAGGCCATAAAGCGGCTTCCTGCACGGCCGCCCCGCACTGCGCTCTGTGCGCTGCGGCCGGGCGCAGGGCAAACCACCGGGCGGGAGGCAAGGCGTGTTTCCCGTCCGGTGATAACACCGAACGAAACCGGCGCCGGAAATCAAAGCGCCGGCAAAAGAGAAGGTTGGCCAGAGGAGCACTGGCCAACGTTGTAATCCCCGTTGCGGCGCCGGTGCCGGAGAGCGGGGGCAGCGGAAACCTGAACCACTCCGCCAGAGCTCAGGACATGCTGTCTCAGAGCATGGCGGAGTGGTCCATAGATGTGGCTGTGGTCGCCGAGCCGTATTTCGTTCCCCCAGCAAATGATTGCTGGTTTGGGGACGACGGCGGCTTGGCGGCCATAGTCATAAGAAGAGACGCGGCGATCCCCCCCCTGGCGATGGTGACCAGGGGTCAAGGGTTCGTCGCGGTGCAGCTGGAAGGGACCGTCGTGATCGGGGCGTACTTCTCTCCGAACAGGCCTACCGTCGAGTTCGGACATTTCCTGGACGGGATCGGGGCGATTGCTCGCCGCCTCGCTCCCCGTCCAGTGATTCTTGCGGGGGATCTTAATGCGAAATCTGTCGCATGGGGCTCCCCCCGCTCGAACGCTCGTGGTAGGCTACTGGAGAGGTGGGCGAACGCGGCCGGCCTCTGTTTATTGAATAGAGGTACGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTTGCGAGCCCGGCCATCGCGCGCCGTATCCGCGACTGGAGGGTTTTGGAGGGGGCGGAGACACTGTCAGATCACCGATATATTCGGTTCGATCTCTCCGCCCGCTCCACAGTCGCGGACGCCCGCGGGGGCCATCCCCGTGACGCGTCTCGATCATTCCCTAGGTGGGCATTGAAGCGCCTGAATAAGGAGCTCCTGATGGAAGCCTCTACAGTGGCGGCGTGGACGCCCATGCGTCCACACCCGGTCGAGGTCGAGGGCGAGGCGGGGTGGTTCCGGGACACGATGCGTCGCATCTGTGATGTGTCGATGCCCCGGATCGGCCCTCGACTTCCCAATCGCCAGGCGTACTGGTGGTCGCCTGAAATCGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCCAGGCATCGCCGCCGCCACCTGCCGCGGCGCAACGATCCGGTTGCGTTCGCGGCAGTGGAGGCTCGGCTGCACGGCGCATTTCGCGTCGCGCAGAGAGCGCTGCAGCTGGCCATCAGAAGAGCCAAGGACCGACACATGGAGGGTCTCTTGGAGACGCTGAATGAGGATCCGTGGGGGCGGCCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCGATCACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGACATCGTCTCGGCGCTGTTCCCGCAGGAGCGGGAGGGATTTGTCGCTCCCGCTATGGACGCGCCGCCGGAATACGACGGTGAAGTCCCTGCTGAGGTGCCCCATATAACGGGGGCGGAGCTCCGTGTGGCCGTGCGCAAAATGTGCACGAAGGACACTGCACCCGGCCCGGACGGCGTCCATGGCCGGACTCGTGCTGTTGAGAAAGGAGGGGCGCCCATCGAGGGGTACCGTCCCATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGTATTCTGGCGGCCCGCATCATCCAGCATCTGGTCGGGGTGGGACCCGATCTGTCGGCGGAACAGTATGGCTTCCGAGAGGGCCGCTCAACGGTGGACGCGATCCTTCGCGTGCGGGCCCTCTCGGAGGAGGCCATCTCCAGGGGCGGGGTGGCTTTGGCGGTGTCACTCGATATCGCCAATGCATTTAACACCCTGCCCTGGTCCGTGATAGGGGCGGCGCTAGAAAGACACGGAGTGCCCCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAAGACAGATCGGTCACATGTACCGGACACGGTGGGATCGTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTGAGCGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGAGGGAGTTTTGCTGAGTCTGCCCGTCTTGCCACCGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTTCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGGATTGGGGTCGGGGTGCAGCTGAAGTATCTCGGCCTCATTCTGGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGAACCTGGTCCCTCGTTTGTTGGGGGCGGCCGGCGCGTTAAGCCGGCTTCTGCCCAACATCGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACAGGAGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTGGCGAGGCTGCTGCAAAAGCCGCAACGCACCATCGCGGTCAGGGTCATTCGTGGTTATCGCACCATCTCCTTCGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTTCTGGAAGCGGAGGCGCTCGCCGCTGACTATCAGTGGCGGGCTGACCTTCGTGCCCGGGGCGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAATCATGGTCCAGGCGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCACCCAGTCCTTGTGGATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTTCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCAGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGATTGCGACTTGGACACGGCAGAGCATACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTACCGAGTGTTGTGGCATCGATGCTCGGCGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTTAGAGACGCGCAAGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATTTCGCCCAAGCCCTGGCCCTCTAA
Protein
MRSALASDSGAINPTRSSAGKKRRRKKTPLQTSDDGGASSSSIEVPEKTMAVEEVVPVVSGPATSEDMMPAPQWAPVRRRGAVSPATSVESISTSAASLASGDETFRDLDLALVNLGKLLSTVAAKGAEPGSSYRKRLREGAAMVKTRLIPTMSKLYNLVASREGDKKGLVAQLDPREKAMDTDVPSRAAKSVPAPMPVPTPVASIPRAPTSALSRPPRRVELRPALPPRISAAPASVQRGVQRPAPAQTEDIRSPLARMVDEWPALPRPRSTEPSLSAPRAVGPQSPHYVAAGMREVNNSLPSKEEMVACISRAVAVEVGKHFASLEEMLRSSVDSGVCVLAPKAAAAPRDQSTRPTSAFTPSARVVQRGGRNQNSRAAGAPRSQPQSRSLPPPPSNMDEGWTEVSTGRQQEEKRKEEAVVVTLLPAAAEKGLTYDEVMARARAAVNLEEIGAEEGLRFRHTANGAKLLECPGANSSGIADKLVATLRVALPEEDVRVHRPVRMAEIRITGLDDCATREEVAAAIAAQGGCAPESVTVGELRSGYSGARSAWARCPVEAATFLATPPPGRSTGDPGRLRVGWIAAHVRLQEPRAWRCLRCFSTRHGLARCTSSIDRSGLCFRCGQPGHKAASCTAAPHCALCAAAGRRANHRAGGKACFPSGDNTERNRRRKSKRRQKRRLARGALANVVIPVAAPVPESGGSGNLNHSARAQDMLSQSMAEWSIDVAVVAEPYFVPPANDCWFGDDGGLAAIVIRRDAAIPPLAMVTRGQGFVAVQLEGTVVIGAYFSPNRPTVEFGHFLDGIGAIARRLAPRPVILAGDLNAKSVAWGSPRSNARGRLLERWANAAGLCLLNRGTVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSTVADARGGHPRDASRSFPRWALKRLNKELLMEASTVAAWTPMRPHPVEVEGEAGWFRDTMRRICDVSMPRIGPRLPNRQAYWWSPEIAQLRVECVRARRECARHRRRHLPRRNDPVAFAAVEARLHGAFRVAQRALQLAIRRAKDRHMEGLLETLNEDPWGRPYHMVRNKMRPWAPPITERLQPQQLRDIVSALFPQEREGFVAPAMDAPPEYDGEVPAEVPHITGAELRVAVRKMCTKDTAPGPDGVHGRTRAVEKGGAPIEGYRPIVLLDEVGKLLERILAARIIQHLVGVGPDLSAEQYGFREGRSTVDAILRVRALSEEAISRGGVALAVSLDIANAFNTLPWSVIGAALERHGVPPYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGAAGALSRLLPNIGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVARLLQKPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRADLRARGVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIHPVLVDWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIRAEPTAECHHCDCDLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADFAQALAL
Summary
Uniprot
EMBL
Proteomes
Interpro
Gene 3D
ProteinModelPortal
PDB
1WDU
E-value=1.03996e-10,
Score=166
Ontologies
GO
Topology
Length:
1718
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.20014
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1 - 1718
Population Genetic Test Statistics
Pi
12.347906
Theta
123.204241
Tajima's D
1.364619
CLR
0.336913
CSRT
0.752062396880156
Interpretation
Uncertain
