SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10389
Pre Gene Modal
BGIBMGA007038
Annotation
PREDICTED:_sodium-independent_sulfate_anion_transporter-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.875
 

Sequence

CDS
ATGTATGGCCTGTACGCGTCTTTCGTGGGTGGATTCGTTTACGCGATCATGGGCACATGCCCTCAGATCAACATTGGACCGACGGCGTTACTGTCACTTCTCACCTTCACTTACACAAGCGGCACTAACGCCGACTTCGCCGTGCTACTATGTTTCATTGCCGGAATAGTTCAGCTATTCGCTGGATTCGCACAGCTGGGGTTCTTAGTGGAGTTCGTCTCCCTACCGGTAGTGTCAGGTTTCACGTCGGCAGCTGCCATCACTATAGCTTCATCCCAAATTAAAGGCTTGTTAGGATTGAAGTTCAGCGCAGAGACCTTCATATCGACTTGGAAGGAACTCTTTGTTCATATTGGAGAAACGAGGATGCAGGACACATTACTCAGCTTATTCTGCTGCATTGTGCTGATGGGAATGAAGGCATTAAAAGATATCGAAATCAAAAGTGTAATAAACGACAAGAACCGAAAAGGTATGCTGATACTGCAAAGGTTTTTGTGGTTCGTTGGAGTCTCACGGAACGCCGTGGTCGTGGTGCTAGCTGCAGTACTGGCGTACACGGTACATGAAGATAAAAGGGACCCGCTCATATTGACGGGTAGCATTACTCCAGGCCTTCCAATTCCTCAAGCACCTGCCTTCCACACAACGGTGGGTAATACTACATATACTGCGGTGGAAATGTTCACGCATTTGGGCTCTGGTCTCTTGGTGGTTCCATTAGTTGGAATCATCTCGAATGTGGCCATCGCCAAAGCTTTCTCGAACGGCAGAACGTTGGACGCCACTCAGGAGATAGTGGCTCTGGGCGCTTGCAACTTGTTCGGGGCATTCTTTCGTTCGTTTCCCGTGAACGGTTCGTTCACACGGAGCGCTGTCAGCGAAGCTTCCGGGGTCAAGACGCCGGCCGCTGGTTTCTATACTGGTGTAATCGTATTACTGACGTTGGCCCTCCTGACTCCGTACTTCTTCTTCATTCCGCGCGCCGCGCTCTCCGCCGTGATAGTTTGCGCCGTCCTGCACATGGTCGACACGGACATACTGAAGAAACTCTGGAACACCAGCCGATTAGACCTGATACCGCTGTTGGGTTCCTTCGTATGCTGTCTAGCATTGGGTATCGAAGTGGGATTGATATGTGGAGTTATAGTAGACATGCTACTGCTGCTCTACTACCATTCCAGACCCCCACTCGATATAGTTTATGTTAATGACGGAGTTTTGCCAGCGCATTTTGCGATCCATCCGTGCGGCGGTTTGTATTTCGCTGGAGCAGAACAAGTCAGATCAAAACTGATATCTCTGAGAAAACCTAAAAACAACAGCATCCCGGCTACAGCACTAGAAACATTAACAATAATACCTGATTCGGATAATAATGGAACTAGTGATGGGAACAATATCGCTAATGGAAATCATATTGCCAACGGGAATTTATCCAATGGGAATAATAATGCCAACGGGAATAATGTTACCAATGGGAATATCAACGGTAACTTTATAAGGTCCACAGAACTTCTAGTCGTGTATTGTGACGCAGTGTCTAGAATGGACTATACTTTTTTGCAGAGTTTGAAAATGTTAGTGGCGGAATGGTCACGTGGCGGTCGCGTTTTCTGGTGTGACGCGAATCCCTTAGTGAAAGAACAATTGCTGAACGTTCTCCAGGACCCTCACTTCTGCGACGCCGAGCAGCTCAGGATACTGTTGGCCGGTACTCTGTCGGAAGATTCACAGGTAAACATAAGCGATACACAACTCTAG
Protein
MYGLYASFVGGFVYAIMGTCPQINIGPTALLSLLTFTYTSGTNADFAVLLCFIAGIVQLFAGFAQLGFLVEFVSLPVVSGFTSAAAITIASSQIKGLLGLKFSAETFISTWKELFVHIGETRMQDTLLSLFCCIVLMGMKALKDIEIKSVINDKNRKGMLILQRFLWFVGVSRNAVVVVLAAVLAYTVHEDKRDPLILTGSITPGLPIPQAPAFHTTVGNTTYTAVEMFTHLGSGLLVVPLVGIISNVAIAKAFSNGRTLDATQEIVALGACNLFGAFFRSFPVNGSFTRSAVSEASGVKTPAAGFYTGVIVLLTLALLTPYFFFIPRAALSAVIVCAVLHMVDTDILKKLWNTSRLDLIPLLGSFVCCLALGIEVGLICGVIVDMLLLLYYHSRPPLDIVYVNDGVLPAHFAIHPCGGLYFAGAEQVRSKLISLRKPKNNSIPATALETLTIIPDSDNNGTSDGNNIANGNHIANGNLSNGNNNANGNNVTNGNINGNFIRSTELLVVYCDAVSRMDYTFLQSLKMLVAEWSRGGRVFWCDANPLVKEQLLNVLQDPHFCDAEQLRILLAGTLSEDSQVNISDTQL

Summary

Similarity
Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
EMBL
BABH01014760    KQ459603    KPI92993.1    KQ460328    KPJ15650.1    RSAL01000218    + More
RVE44086.1    NEVH01000254    PNF43821.1    KZ288289    PBC29241.1    GEBQ01002062    JAT37915.1    DS235051    EEB10996.1    QOIP01000004    RLU23928.1    JR037370    AEY57743.1    KQ435010    KZC13730.1    GL443425    EFN62075.1    GEDC01022690    JAS14608.1    GEZM01025131    JAV87571.1    KQ981522    KYN40710.1    NEVH01016331    PNF25526.1    PNF25529.1    KK852498    KDR22565.1    GEDC01029081    GEDC01027874    JAS08217.1    JAS09424.1    KQ971362    KYB25751.1    GBGD01000832    JAC88057.1    PBC29243.1    GECZ01027882    JAS41887.1    GBBI01002876    JAC15836.1    GL450241    EFN81292.1    GDKW01003168    JAI53427.1    ACPB03015825    GBGD01000966    JAC87923.1    GBBI01002547    JAC16165.1    GFTR01007289    JAW09137.1    KYB25752.1    GL888355    EGI62238.1    KQ979854    KYN18808.1    KQ976403    KYM92093.1    BABH01014720    BABH01014721    KQ414615    KOC68513.1    KQ976445    KYM86091.1    ADTU01002138    ADTU01002139    ADTU01002140    GL441216    EFN65015.1    KZC13728.1    KPI92998.1    ADTU01026211    ADTU01026212    KQ435711    KOX79687.1    KQ982431    KYQ56537.1    KYN40712.1    GGMR01006712    MBY19331.1    KQ971361    EFA05122.1    ACPB03016174    AAZX01007293    LJIG01000412    KRT86528.1    KQ978143    KYM96789.1    ABLF02031674    ABLF02031675    ABLF02031682    ABLF02057042    KK107046    EZA61752.1    RLU23357.1    GBYB01011218    GBYB01011219    JAG80985.1    JAG80986.1    KZ149989    PZC75632.1    KYM86093.1    ADTU01026210    PNF43809.1    LJIG01016073    KRT81695.1    NEVH01024531    PNF16976.1    AGBW02009651    OWR50240.1    NNAY01000295    OXU29396.1    GEDC01030992    JAS06306.1    GBHO01021951    JAG21653.1    NWSH01004565    PCG64919.1    AGBW02003464    OWR55546.1    ODYU01000799    SOQ36122.1    GBHO01006039    JAG37565.1    GECL01002483    JAP03641.1    GDHC01019650    JAP98978.1    AJVK01012081    AJVK01012082    GDRN01063798    JAI64926.1    GBHO01006041    GBHO01006040    GBRD01002176    JAG37563.1    JAG37564.1    JAG63645.1    GDHC01003426    JAQ15203.1    GDRN01063797    JAI64927.1    KYM92092.1    GDRN01063799    JAI64925.1    KQ434823    KZC07237.1    DS235156    EEB12660.1   
Pfam
PF00916   Sulfate_transp        + More
PF01740   STAS
PF05903   Peptidase_C97
Interpro
IPR011547   SLC26A/SulP_dom        + More
IPR001902   SLC26A/SulP_fam       
IPR036513   STAS_dom_sf       
IPR002645   STAS_dom       
IPR018045   S04_transporter_CS       
IPR008580   PPPDE_dom       
IPR042266   PPPDE_sf       
SUPFAM
SSF52091   SSF52091       
Gene 3D
PDB
5DA0     E-value=0.0390989,     Score=88

Ontologies

Topology

Subcellular location
Membrane  
Length:
587
Number of predicted TMHs:
8
Exp number of AAs in TMHs:
191.24938
Exp number, first 60 AAs:
37.99071
Total prob of N-in:
0.27982
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  26
inside
27  -  45
TMhelix
46  -  68
outside
69  -  71
TMhelix
72  -  94
inside
95  -  164
TMhelix
165  -  187
outside
188  -  227
TMhelix
228  -  250
inside
251  -  261
TMhelix
262  -  284
outside
285  -  303
TMhelix
304  -  326
inside
327  -  361
TMhelix
362  -  384
outside
385  -  587
 
 

Population Genetic Test Statistics

Pi
233.539089
Theta
180.770091
Tajima's D
0.757067
CLR
0.346641
CSRT
0.589820508974551
Interpretation
Uncertain
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