Gene

KWMTBOMO10387

Pre Gene Modal

BGIBMGA007067

Annotation

PREDICTED:_uncharacterized_protein_LOC105842483_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr17(+):9573475-9618679      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.777

CDS

ATGGACGACGAAAAACTCCACTCCGTCAAGTGGTACCGGGATATGAACGAGATTTTCCGGTACAATCCGTCTCAGAAGCCGCCAATACGACTGTTCAATATAACGGACATCATGGTACAAGGCGGAAAATGTGAGGTAGACTCTTGCATGGTCCGAGTTATGCCTCCACCCATAGCTACGAGAGCCGCATACACTTGTGAAGTATCAACGGAAGGGCCAAAGTTCTTTATTGCGAGAAAGACAAAACATATGACTGTTGTTGCCATACCGGAAATGGATCCTGTCATAATTGGAGCTCCGAAAGTACTGAAGCCGGGGGAACAGATATTCCTAAACTGCACGTCGGATTACTCGTTGCCACCGTCCGATATTAATTGGTACATCGATGATGAGTTTCAAAAGCCTGAAGCGTGGCAACGGACGGAACAGAGTGCGCCCCAGCCTGGAGGTCTGCGTCGATCGTGGCGCGTACTCCGATTGCGAGTTCCACCGACGGCAAGCGGCACGATCAGAGTGAGATGCGAAGCGATCCTGCTTGTCGAGCCGCCGGTCGTGCGAGACGCCAATATCATCATCACTATACATTCTCGTACGCAACCTTCAAAATACGTCTCGAATAGTGTAGGTACTAATAAATATTTGAATGAAGTGTTACTGCTCACTATAATATGGACTATCAAACATATATTGAGGTTTGTTCTTATCTAA

Protein

MDDEKLHSVKWYRDMNEIFRYNPSQKPPIRLFNITDIMVQGGKCEVDSCMVRVMPPPIATRAAYTCEVSTEGPKFFIARKTKHMTVVAIPEMDPVIIGAPKVLKPGEQIFLNCTSDYSLPPSDINWYIDDEFQKPEAWQRTEQSAPQPGGLRRSWRVLRLRVPPTASGTIRVRCEAILLVEPPVVRDANIIITIHSRTQPSKYVSNSVGTNKYLNEVLLLTIIWTIKHILRFVLI

Uniprot

A0A3S2P4U3   A0A194PHV2   A0A0N1IFB6   A0A212FIS7   A0A0N1IA49   A0A2H1VEZ0   + More
A0A2A4K3V1   A0A194R954   A0A2W1BX27   A0A194QDY6   A0A2W1BPY5   A0A194RK13   A0A212EIS4   A0A1J1J1T1   A0A1J1HMI8   A0A182Y4X1   A0A0A9Z391   A0A084VIS3   A0A1B6MQU5   A0A2A3EPM7  

Pubmed

26354079    22118469    28756777    25244985    25401762    26823975    + More
24438588   

EMBL

RSAL01000418    RVE41807.1    KQ459603    KPI92996.1    KQ460328    KPJ15653.1    + More
AGBW02008339    OWR53632.1    KQ459169    KPJ03416.1    ODYU01002226    SOQ39430.1    NWSH01000213    PCG78350.1    KQ460779    KPJ12401.1    KZ149921    PZC77747.1    KQ459144    KPJ03687.1    KZ149989    PZC75625.1    KQ460124    KPJ17675.1    AGBW02014584    OWR41384.1    CVRI01000066    CRL06405.1    CVRI01000011    CRK89280.1    GBHO01003887    GBRD01008649    GDHC01018942    JAG39717.1    JAG57172.1    JAP99686.1    ATLV01013388    KE524855    KFB37867.1    GEBQ01028361    GEBQ01020600    GEBQ01001677    JAT11616.1    JAT19377.1    JAT38300.1    KZ288204    PBC33176.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000007151    UP000218220    UP000183832    + More
UP000076408    UP000030765    UP000242457   

Pfam

PF08205   C2-set_2        + More
PF07686   V-set

Interpro

IPR013783   Ig-like_fold        + More
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR013162   CD80_C2-set       
IPR013106   Ig_V-set       
IPR003599   Ig_sub       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A3S2P4U3   A0A194PHV2   A0A0N1IFB6   A0A212FIS7   A0A0N1IA49   A0A2H1VEZ0   + More
A0A2A4K3V1   A0A194R954   A0A2W1BX27   A0A194QDY6   A0A2W1BPY5   A0A194RK13   A0A212EIS4   A0A1J1J1T1   A0A1J1HMI8   A0A182Y4X1   A0A0A9Z391   A0A084VIS3   A0A1B6MQU5   A0A2A3EPM7  

PDB

1F97     E-value=0.0166687,     Score=87

KEGG

105842483    no KO assigned | (RefSeq) uncharacterized LOC105842483

GO

GO:0016021   GO:0005515   GO:0015116   GO:0006415   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.82727

Exp number, first 60 AAs:

0.0001

Total prob of N-in:

0.11409

outside

1  -  235

 

 

Pi

32.97948

Theta

22.754652

Tajima's D

-1.507677

CLR

2872.159606

CSRT

0.0588470576471176

Interpretation

Uncertain