SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10385  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007041
Annotation
PREDICTED:_sodium-independent_sulfate_anion_transporter_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.953
 

Sequence

CDS
ATGCACAAAAGGCTTCCAATTTCAAAATGGCTCCCAGAGTACAACTCAAGTAAAGCCGTTGCAGATTTGATAGCCGGGATCACAGTCGGACTGACAGTCATTCCCCAGGCTTTAGCGTACGCCACGTTGGCCGGGCTAGAACCACAGTACGGTCTCTATTCGTCATTCGTGGGCTGCTTTATATACATCATATTTGGATCATGCAAAGATATCACCCTGGGCCCCACAGCTCTATTGGCTCTCATGACGCATCAGCAGATACTAGGAAGGAATACAGACTACGCTATATTGCTCTGTTTTTTATCCGGAGTGGTGCAGTTGGCTATGGGAATATTGCACTTAGGCGTCCTCATTGATTTCATATCGGTGCCTGTAACCGTCGGTTTCACATCAGCCACGTCTGTGATAATAGCCGTGTCGCAACTGAAAGGATTACTCGGCCTACAATTTGAGTCTGGTGGGTTTTTGGATACTTTGAAAAAGGTTATTACAAATATACCCAAAGCTAGAGTTGAGGACAGCACGCTGGGTATTTCGTGCATAGTCATTCTGCTTTTAATGAGAAAAATAAAAGCTATAAATTTATCACCCAGCAGAAAGGGCTTGAAGAAAACACTATGGCTTCTGTCGACTTCCAGAAATGCAGTCATTGTTGTTCTGTGCTCCGTAGCGGCTTTTATACTGAAACAATATCAATTGACTCCGTTCAAGCTGACCGGAAAAGTTAAAGAAGGCCTTCCCTCGTTCAAGCTACCGCCGTTCAGCACGGAATACGGCGGCAAAAATGTCACCTTCATAGAAATGTGCTCCGATCTCGGTTCTTCCATAGTTTTAGTTCCTATCATAGCGGTATTGGGCAATGTGGCTATTGCTAAAGCTTTTGCAAGCGGAGACTCGATAGACGCGACCCAAGAACTGATAACCATATCGTTTGCGAATATTTTTGGTTCGTTTGTTGGCGCAATGCCGATAACGGGTTCGTTTTCGAGAAGTGCTGTGAACCACGCCAGCGGTGTAGCAACACAGTTCGGGAGTATATACACAGGTGCTTTGGTACTTCTCGCCTTAAGTCTGCTCACTCCATACTTCTACTACATACCAAAGGCGGCACTCGCGGCGGTCATCATTTGCGCTGTGATATTTATGATAGAATACGAGGTAGTGAAACCGATGTGGCGTTCTCGTCGGGCCGATTTAGTGCCTGCGTTCGCGACGTTCGCCCTGTGTCTGGCCATCGGGGTGGAGCTCGGGATATTGGCGGGCGTGGCCGTGAACGTGCTGCTGCTTCTGTACCCGAGCGCGAGGCCACAGCTGGACTCTGAAGTCATAACGAATGGATCGGGCTTTTCGTATTTAATGGTGACCGTTGGGAATAGTCTATATTTCCCCGGAGTTGAATACATCAGGCAGTACGTTGAGAGGGTCGCTAAGAAGCAGGGCGGGTGCAGTATGCCCGTCGTTATAGACTGCAGATATGTTCTCGGAGCGGATTTCACGGCAGCTAAAGGAATGTGTTCATTGTCAAACTCTCTGTCGTCGCGCGGTCAGCCTTTGATCCTGCTTTCCCCGCGAGCCAGCGTCGCGTCGGTGTTCAGGAACGCGGGCTCCAGTGTGGTCGTCGTGCTCACTAATTCTGAACTCGACACGACGCTACAAAACATTACCGGCCAGGTACCTTTACTAGTGATAAATGGGCAGGAGAAACGCCAAACACCCCCGCCCAACTACGAGTCGTTAAGAGTCGACGATGACGTCACAGAGATAGTCATAACCGACGAAAAAAATACGACCCCTCTTCTAAACAGAAACGGAAACAAACCGCGCAGCAACGAGGTCAATAACACATGA
Protein
MHKRLPISKWLPEYNSSKAVADLIAGITVGLTVIPQALAYATLAGLEPQYGLYSSFVGCFIYIIFGSCKDITLGPTALLALMTHQQILGRNTDYAILLCFLSGVVQLAMGILHLGVLIDFISVPVTVGFTSATSVIIAVSQLKGLLGLQFESGGFLDTLKKVITNIPKARVEDSTLGISCIVILLLMRKIKAINLSPSRKGLKKTLWLLSTSRNAVIVVLCSVAAFILKQYQLTPFKLTGKVKEGLPSFKLPPFSTEYGGKNVTFIEMCSDLGSSIVLVPIIAVLGNVAIAKAFASGDSIDATQELITISFANIFGSFVGAMPITGSFSRSAVNHASGVATQFGSIYTGALVLLALSLLTPYFYYIPKAALAAVIICAVIFMIEYEVVKPMWRSRRADLVPAFATFALCLAIGVELGILAGVAVNVLLLLYPSARPQLDSEVITNGSGFSYLMVTVGNSLYFPGVEYIRQYVERVAKKQGGCSMPVVIDCRYVLGADFTAAKGMCSLSNSLSSRGQPLILLSPRASVASVFRNAGSSVVVVLTNSELDTTLQNITGQVPLLVINGQEKRQTPPPNYESLRVDDDVTEIVITDEKNTTPLLNRNGNKPRSNEVNNT

Summary

Similarity
Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
EMBL
BABH01014720    BABH01014721    ODYU01000799    SOQ36122.1    KQ459603    KPI92998.1    + More
AGBW02003464    OWR55546.1    KQ460328    KPJ15655.1    NWSH01004149    PCG65423.1    GEDC01022690    JAS14608.1    NEVH01016331    PNF25526.1    PNF25529.1    KK852498    KDR22565.1    DS235051    EEB10996.1    KQ971362    KYB25752.1    ABLF02031674    ABLF02031675    ABLF02031682    ABLF02057042    GGMR01006712    MBY19331.1    KZ288289    PBC29243.1    GL449511    EFN82619.1    GECZ01027882    JAS41887.1    KQ435711    KOX79687.1    KQ414615    KOC68513.1    GEZM01025131    JAV87571.1    KK107046    QOIP01000004    EZA61752.1    RLU23357.1    GBYB01011218    GBYB01011219    JAG80985.1    JAG80986.1    KQ435010    KZC13728.1    KQ976445    KYM86093.1    ADTU01026210    GL441216    EFN65015.1    KQ981522    KYN40712.1    KQ978143    KYM96789.1    NNAY01000295    OXU29396.1    APGK01052414    APGK01052415    APGK01052416    KB741212    ENN72710.1    KB632279    ERL91290.1    GL888355    EGI62236.1    KQ982088    KYQ60099.1    GBGD01000832    JAC88057.1    GBBI01002876    JAC15836.1    GBHO01021951    JAG21653.1    DS235156    EEB12660.1    GEDC01030992    JAS06306.1    ACPB03016174    GBBI01002547    JAC16165.1    KK852421    KDR24301.1    GDKW01003168    JAI53427.1    ACPB03015825    GBGD01000966    JAC87923.1    GFTR01007289    JAW09137.1    GGMS01014215    MBY83418.1    GFXV01001159    MBW12964.1    ABLF02032283    ABLF02032286    ABLF02032290    ABLF02032292    GBHO01006039    JAG37565.1    GBHO01006041    GBHO01006040    GBRD01002176    JAG37563.1    JAG37564.1    JAG63645.1    GDHC01019650    JAP98978.1    GDHC01003426    JAQ15203.1    LJIG01016073    KRT81695.1    LJIG01000412    KRT86528.1    KQ971361    EFA05122.1    KK107167    EZA56467.1    QOIP01000010    RLU18002.1    GL888147    EGI66553.1    DS232258    EDS38591.1    KQ981724    KYN37236.1    KQ976514    KYM82269.1    ATLV01013150    KE524842    KFB37340.1    CH477695    EAT37147.1    GL452471    EFN77149.1    LBMM01001414    KMQ96365.1    GFDL01009262    JAV25783.1    KQ971363    EFA07819.1    KQ759878    OAD62248.1    NWSH01004565    PCG64919.1    AAAB01008888    EAA08802.5    EGK97074.1    AGBW02009651    OWR50240.1    APCN01005533    GEBQ01002062    JAT37915.1    KZ288400    PBC26292.1    JR039342    AEY58647.1    KQ414665    KOC65145.1    GBGD01000827    JAC88062.1    AF180728    AAD53951.1    GL450151    EFN81449.1    CM000364    EDX14292.1   
Pfam
PF01740   STAS        + More
PF00916   Sulfate_transp
Interpro
IPR011547   SLC26A/SulP_dom        + More
IPR002645   STAS_dom       
IPR001902   SLC26A/SulP_fam       
IPR036513   STAS_dom_sf       
IPR018045   S04_transporter_CS       
SUPFAM
SSF52091   SSF52091       
Gene 3D
PDB
5DA0     E-value=8.1803e-14,     Score=189

Ontologies

Topology

Subcellular location
Membrane  
Length:
615
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
234.35777
Exp number, first 60 AAs:
25.48063
Total prob of N-in:
0.93042
POSSIBLE N-term signal
sequence
inside
1  -  22
TMhelix
23  -  45
outside
46  -  59
TMhelix
60  -  82
inside
83  -  93
TMhelix
94  -  116
outside
117  -  119
TMhelix
120  -  142
inside
143  -  205
TMhelix
206  -  228
outside
229  -  271
TMhelix
272  -  294
inside
295  -  305
TMhelix
306  -  328
outside
329  -  342
TMhelix
343  -  365
inside
366  -  369
TMhelix
370  -  388
outside
389  -  402
TMhelix
403  -  425
inside
426  -  615
 
 

Population Genetic Test Statistics

Pi
212.677595
Theta
187.448629
Tajima's D
0.378839
CLR
0.326917
CSRT
0.478526073696315
Interpretation
Uncertain
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