Gene

KWMTBOMO10381  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007043

Annotation

PREDICTED:_signal_peptidase_complex_subunit_1_[Amyelois_transitella]

Location

Bomo_Chr17(-):9295106-9295529      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.967

CDS

ATGGATTTCTTTACATCTATACCAACCCACATAGATTACGTCGGACAAGCAAAAGCAGAGAAATTATACAGGGCAATAATTACATTGTTCAGTATAGTTGGTTTTGTATGGGGTTATATAGTTCAGCAATTCTCGCAGTCAGTGTATATTCTTGGTGCTGGATTTCTGCTTGCTGCCATTCTTACTGTTCCTCCATGGCCAATGTACCGACGCAATCCTCTGAACTGGCAGGTTCCTAAGAACGGTGATGACAAACCAGCAGCCAAGAAAGGAAAGAAGTGA

Protein

MDFFTSIPTHIDYVGQAKAEKLYRAIITLFSIVGFVWGYIVQQFSQSVYILGAGFLLAAILTVPPWPMYRRNPLNWQVPKNGDDKPAAKKGKK

Similarity

Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.

Uniprot

H9JBZ8   A0A2H1V8V7   A0A0N1IPQ6   A0A0L7L175   I4DMW5   I4DJT5   + More
A0A212FPB9   S4NSY9   A0A1W4WTR3   A0A151X5E0   R4FPD3   E2ABG7   A0A023FB15   E2J7F1   A0A069DN76   T1HXR1   A0A158NAG5   A0A0J7KM77   G1K074   A0A195CKT1   D6WSR1   A0A232FGC7   K7J753   E2BXX4   A0A026WH36   E0VNM3   A0A0P4VVC5   A0A067QGU3   A0A0L7R8H6   C1BNH2   A0A0N0BIL7   C1C1A0   A0A0C9R5S7   V9IMD8   A0A088A5E0   C1BSI6   A0A154NZ69   A0A0L0BZ22   A0A154P107   W4ZAU7   A0A0K2SWX1   A0A023EEJ8   A0A182GPY6   A0A023EE46   Q17C90   A0A1S4F884   A0A182PRH3   A0A182Q499   A0A182R5M3   Q1HR98   A0A182VY52   A0A182X8V0   A0A182VLU2   A0A182L6W9   Q7QAD1   A0A336LSM9   A0A182N4Q3   A0A182XWQ7   T1E3W6   A0A0K8TPL6   A0A1Q3FGP7   A0A084VEN7   A0A1I8M0G9   A0A182F9K6   A0A2M4A8P8   W5JCK6   A0A0N0BIG4   U5ELA0   A0A2M3ZL96   A0A2M4C4P1   A0A1I8NYG0   A0A182IZC6   A0A1L8EFC0   A0A1L8EFH2   A0A1L8EFE7   N6TQ36   B0WEY3   C4N1A3   A0A1B0B519   A0A3M6T9R9   B4KCJ5   A0A151J0H9   A0A2J7RFH4   A0A1D2MQ40   A0A1S3IXF4   A0A0M4ENC6   A0A195EVM6   A0A1Q3FH21   Q29BW7   B4GPK2   T1J4D0   A0A1B0EUG8   A0A3Q2YTG4   R7UNQ8   A0A3Q2E0F5   A0A3Q3KB63   A0A1I8P5K5   A0A3P9N4F0   T1KH60   A0A3B3YWQ5  

Pubmed

19121390    26354079    26227816    22651552    22118469    23622113    + More
20798317    25474469    26334808    21347285    21736942    18362917    19820115    28648823    20075255    24508170    30249741    20566863    27129103    24845553    26108605    24945155    26483478    17510324    17204158    20966253    12364791    14747013    17210077    25244985    24330624    26369729    24438588    25315136    20920257    23761445    23537049    19576987    30382153    17994087    27289101    15632085    23254933   

EMBL

BABH01014715    ODYU01001281    SOQ37283.1    KQ460328    KPJ15659.1    JTDY01003687    + More
KOB69150.1    AK402633    BAM19255.1    AK401553    KQ459603    BAM18175.1    KPI93002.1    AGBW02003464    OWR55550.1    GAIX01013852    JAA78708.1    KQ982519    KYQ55509.1    GAHY01000939    JAA76571.1    GL438246    EFN69233.1    GBBI01000006    JAC18706.1    HP429369    ADN29869.1    GBGD01003609    JAC85280.1    ACPB03017388    ADTU01010286    LBMM01005592    KMQ91397.1    JO494955    AEL79185.1    KQ977642    KYN01062.1    KQ971354    EFA07146.1    NNAY01000297    OXU29377.1    AAZX01008222    GL451341    EFN79457.1    KK107231    QOIP01000009    EZA54986.1    RLU19097.1    DS235340    EEB14979.1    GDKW01003032    JAI53563.1    KK853474    KDR07356.1    KQ414633    KOC67066.1    BT076151    BT076647    BT077217    ACO10575.1    ACO11071.1    KQ435729    KOX77641.1    BT080629    ACO15053.1    GBYB01003280    JAG73047.1    JR051784    AEY61559.1    BT077565    ACO11989.1    KQ434783    KZC04927.1    JRES01001133    KNC25260.1    KZC04928.1    AAGJ04052850    HACA01000932    CDW18293.1    GAPW01006519    JAC07079.1    JXUM01015410    KQ560429    KXJ82450.1    GAPW01006518    GAPW01006517    JAC07081.1    CH477310    EAT43985.1    AXCN02001188    DQ440196    ABF18229.1    AAAB01008898    EAA09008.3    UFQS01000078    UFQT01000078    SSW99045.1    SSX19427.1    GALA01000005    JAA94847.1    GDAI01001299    JAI16304.1    GFDL01008324    JAV26721.1    ATLV01012285    KE524778    KFB36431.1    GGFK01003791    MBW37112.1    ADMH02001608    ETN61821.1    KOX77642.1    GANO01001496    JAB58375.1    GGFM01008437    MBW29188.1    GGFJ01011074    MBW60215.1    GFDG01001382    JAV17417.1    GFDG01001385    JAV17414.1    GFDG01001383    JAV17416.1    APGK01025593    KB740597    ENN80128.1    DS231912    EDS25841.1    EZ048876    ACN69168.1    JXJN01008590    RCHS01004051    RMX38081.1    CH933806    EDW14814.1    KQ980629    KYN15016.1    NEVH01004413    PNF39577.1    LJIJ01000696    ODM95220.1    CP012526    ALC46176.1    KQ981954    KYN32196.1    GFDL01008211    JAV26834.1    CM000070    EAL26879.1    CH479186    EDW39085.1    JH431842    AJWK01015109    AMQN01007790    KB301402    ELU05542.1    CAEY01000073   

Proteomes

UP000005204    UP000053240    UP000037510    UP000053268    UP000007151    UP000192223    + More
UP000075809    UP000000311    UP000015103    UP000005205    UP000036403    UP000078542    UP000007266    UP000215335    UP000002358    UP000008237    UP000053097    UP000279307    UP000009046    UP000027135    UP000053825    UP000053105    UP000005203    UP000076502    UP000037069    UP000007110    UP000069940    UP000249989    UP000008820    UP000075885    UP000075886    UP000075900    UP000075920    UP000076407    UP000075903    UP000075882    UP000007062    UP000075884    UP000076408    UP000030765    UP000095301    UP000069272    UP000000673    UP000095300    UP000075880    UP000019118    UP000002320    UP000092460    UP000275408    UP000009192    UP000078492    UP000235965    UP000094527    UP000085678    UP000092553    UP000078541    UP000001819    UP000008744    UP000092461    UP000264820    UP000014760    UP000265020    UP000261600    UP000242638    UP000015104    UP000261480   

PRIDE

H9JBZ8   

Pfam

PF06645   SPC12        + More
PF01740   STAS
PF00916   Sulfate_transp
PF12624   Chorein_N
PF00622   SPRY
PF16909   VPS13_C
PF06650   SHR-BD
PF07525   SOCS_box
PF16908   VPS13
PF16910   VPS13_mid_rpt

Interpro

IPR009542   SPC12        + More
IPR037713   Spc1       
IPR001902   SLC26A/SulP_fam       
IPR002645   STAS_dom       
IPR011547   SLC26A/SulP_dom       
IPR036513   STAS_dom_sf       
IPR013320   ConA-like_dom_sf       
IPR026847   VPS13       
IPR041969   VP13D_UBA       
IPR001870   B30.2/SPRY       
IPR009543   SHR-BD       
IPR015940   UBA       
IPR001496   SOCS_box       
IPR026854   VPS13_N       
IPR000772   Ricin_B_lectin       
IPR003877   SPRY_dom       
IPR009060   UBA-like_sf       
IPR031645   VPS13_C       
IPR031642   VPS13_mid_rpt       
IPR031646   VPS13_N2       

SUPFAM

SSF52091   SSF52091        + More
SSF49899   SSF49899       
SSF46934   SSF46934       

Gene 3D

3.30.750.24    

CDD

cd14306  UBA_VP13D

ProteinModelPortal

H9JBZ8   A0A2H1V8V7   A0A0N1IPQ6   A0A0L7L175   I4DMW5   I4DJT5   + More
A0A212FPB9   S4NSY9   A0A1W4WTR3   A0A151X5E0   R4FPD3   E2ABG7   A0A023FB15   E2J7F1   A0A069DN76   T1HXR1   A0A158NAG5   A0A0J7KM77   G1K074   A0A195CKT1   D6WSR1   A0A232FGC7   K7J753   E2BXX4   A0A026WH36   E0VNM3   A0A0P4VVC5   A0A067QGU3   A0A0L7R8H6   C1BNH2   A0A0N0BIL7   C1C1A0   A0A0C9R5S7   V9IMD8   A0A088A5E0   C1BSI6   A0A154NZ69   A0A0L0BZ22   A0A154P107   W4ZAU7   A0A0K2SWX1   A0A023EEJ8   A0A182GPY6   A0A023EE46   Q17C90   A0A1S4F884   A0A182PRH3   A0A182Q499   A0A182R5M3   Q1HR98   A0A182VY52   A0A182X8V0   A0A182VLU2   A0A182L6W9   Q7QAD1   A0A336LSM9   A0A182N4Q3   A0A182XWQ7   T1E3W6   A0A0K8TPL6   A0A1Q3FGP7   A0A084VEN7   A0A1I8M0G9   A0A182F9K6   A0A2M4A8P8   W5JCK6   A0A0N0BIG4   U5ELA0   A0A2M3ZL96   A0A2M4C4P1   A0A1I8NYG0   A0A182IZC6   A0A1L8EFC0   A0A1L8EFH2   A0A1L8EFE7   N6TQ36   B0WEY3   C4N1A3   A0A1B0B519   A0A3M6T9R9   B4KCJ5   A0A151J0H9   A0A2J7RFH4   A0A1D2MQ40   A0A1S3IXF4   A0A0M4ENC6   A0A195EVM6   A0A1Q3FH21   Q29BW7   B4GPK2   T1J4D0   A0A1B0EUG8   A0A3Q2YTG4   R7UNQ8   A0A3Q2E0F5   A0A3Q3KB63   A0A1I8P5K5   A0A3P9N4F0   T1KH60   A0A3B3YWQ5  

KEGG

101738101    K12946 signal peptidase complex subunit 1 [EC:3.4.-.-] | (RefSeq) signal peptidase complex subunit 1

PATHWAY

03060    Protein export - Bombyx mori (domestic silkworm)

GO

GO:0005787   GO:0006465   GO:0016021   GO:0008233   GO:0045047   GO:0030176   GO:0008271   GO:0006415   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

PANTHER

PTHR13202:SF0   PTHR13202   PTHR11814   PTHR16166  

Subcellular location

Membrane  

Length:

93

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

41.01627

Exp number, first 60 AAs:

33.15721

Total prob of N-in:

0.17459

POSSIBLE N-term signal

sequence

outside

1  -  21

TMhelix

22  -  41

inside

42  -  47

TMhelix

48  -  70

outside

71  -  93

 

 

Pi

232.054562

Theta

182.050155

Tajima's D

0.807622

CLR

0

CSRT

0.605969701514924

Interpretation

Uncertain