Gene

KWMTBOMO10373

Pre Gene Modal

BGIBMGA007047

Annotation

short-chain_dehydrogenase/reductase_[Bombyx_mori]

Location

Bomo_Chr17(-):8934017-8939004      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.053

CDS

ATGTCCGTTAGCCGTCTTGTAGCTGTAACAGGGTGTGATAGTGGACTCGGTTGGGCAGTAGCAGCTCGATTAGCCCGAGAAGGCTTCATCACAATAGCTGGTATGCACAAAGGAATAGAAACCGAAGCAGCGAAAGCCCTCGAAAAATTGTGTGCGCACACATTCCCTTTAGACGTAACTAGAGTTGAAAGCGTTCAAGAATTCCGGAAGTACGTGCTTACAGTCTTGAAAGATAATCCTAAATATAAATTTCATGCCGTGGTCAACAACGCTGGAGTTATGACAGTAGGAAAGTACGAATGGATGACAGCATCGATGATAGAAAGCCCGGTTCATGTGAATTTGCTCGGCGCGATGAGAGTCATTTCCGCATTTTTACCAGAGATCAGAAAAACTGCAATCGAAACTACAAGCAAACCTAAGCCCCGTATAATCAACGTTGGTAGCCATTGTGGCCTGCAGCCTTTGCCCGCCTTCGCTGCATACAGTGCAAGCAAAGCTGGCCTTTTGGCGTTGACACGATGTCTACATCTTGAGCACAGCGAGCACGGATTAGCTGTCATTGCCTTTGTACCAGGTGGCTTCGTTGGCTCTAGTAACATTCTGCTCGGGCAAGAAACAAAAGGAGAAGCAATGGTTGAACATTTAAACGATGAACAACGAAAGTTTTACGGAAATAAAATTGAATCTCTAAACAATTATTTGGAGCTGGCATCTGGCGAGGGGAAATTTGATTCAATGCATGATATGAAAATATTGAACACTTTTATGAAGGCTATGTTGGATGAAACTCCGAAATTAATGTATAAAGTGGAATCCTGGAGATATATGTTTTATTATAATTTAATGAGATTGCCTTTGCCATTATTCATTCATAAATGGATTATTAAACAGTTTCTAAGCTTCCCTGATCACCAATGA

Protein

MSVSRLVAVTGCDSGLGWAVAARLAREGFITIAGMHKGIETEAAKALEKLCAHTFPLDVTRVESVQEFRKYVLTVLKDNPKYKFHAVVNNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVISAFLPEIRKTAIETTSKPKPRIINVGSHCGLQPLPAFAAYSASKAGLLALTRCLHLEHSEHGLAVIAFVPGGFVGSSNILLGQETKGEAMVEHLNDEQRKFYGNKIESLNNYLELASGEGKFDSMHDMKILNTFMKAMLDETPKLMYKVESWRYMFYYNLMRLPLPLFIHKWIIKQFLSFPDHQ

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

D4Q9I1   A0A2A4JI37   A0A060Q0K2   A0A194PHU2   A0A194QS64   A0A3S2M4M5   + More
A0A212EPZ0   S4P318   K7J306   A0A1I8PCK7   A0A1I8N9B3   A0A182HAP1   E0VSJ3   A0A034WB66   A0A1I8N9A9   A0A0K8UPW8   A0A1Q3FS61   A0A1Y1LKZ5   A0A336M4K6   A0A1J1I8B0   B3MTJ0   A0A087ZTA4   A0A1B0A8W3   A0A1B0BZ77   A0A232EMD8   U4TY41   E9I9H5   J3JYH1   A0A1A9W6I3   A0A026W555   A0A195BX87   D6WSF7   B4R091   B4HZE9   A0A151IUF5   I3VPX6   Q9VAH3   A0A336LC86   B4PPK1   A0A2P8YI12   B4NBL7   B3P5D1   B0WWJ3   A0A0M9A4I9   A0A154P594   A0A151WUN3   A0A195CBN8   A0A067RSA4   A0A1W4URT6   A0A1A9UQ63   A0A1A9XMW0   A0A0M4EL31   Q29AP2   A0A1B6DNT4   B4G651   A0A1B6FUE5   B4M5T8   A0A2J7R9Z7   B4JYN4   B4K2K6   A0A1I8JUU4   A0A158NXK4   A0A0L7QM99   A0A182JGN0   B4K618   A0A1B6J899   A0A182QQW8   A0A182TRQ8   E2AIZ7   A0A182V2E1   A0A3B0K4J8   T1I0L0   A0A182WY31   Q7Q4T3   A0A146KVZ1   A0A0A9YUM4   A0A182HMT2   A0A182N0H3   A0A182K110   A0A182VV49   A0A2R7WFZ3   A0A034WB62   A0A0J7KS76   W5JT06   A0A182Y4T8   A0A182FIE9   J9KX18   A0A182KWA1   A0A182PL04   A0A0P5G1M5   A0A0P5J2U1   A0A0P5FYV4   A0A0P5RF26  

Pubmed

19121390    20501590    26354079    22118469    23622113    20075255    + More
25315136    26483478    20566863    25348373    28004739    17994087    28648823    23537049    21282665    22516182    24508170    30249741    18362917    19820115    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    29403074    24845553    15632085    21347285    20798317    12364791    14747013    17210077    26823975    25401762    20920257    23761445    25244985    20966253   

EMBL

BABH01014679    BABH01014680    AB361434    BAJ05088.1    NWSH01001431    PCG71244.1    + More
AB894824    BAP01458.1    KQ459603    KPI92986.1    KQ461155    KPJ08363.1    RSAL01000036    RVE51295.1    AGBW02013343    OWR43558.1    GAIX01006669    JAA85891.1    JXUM01123026    KQ566670    KXJ69924.1    DS235751    EEB16349.1    GAKP01007008    GAKP01007005    GAKP01007003    JAC51944.1    GDHF01023600    JAI28714.1    GFDL01004638    JAV30407.1    GEZM01052703    JAV74313.1    UFQS01000550    UFQT01000550    SSX04833.1    SSX25196.1    CVRI01000039    CRK94649.1    CH902623    EDV30580.1    JXJN01023016    NNAY01003399    OXU19472.1    KB631818    ERL86534.1    GL761811    EFZ22778.1    BT128299    AEE63257.1    KK107405    QOIP01000014    EZA51210.1    RLU14939.1    KQ976394    KYM93254.1    KQ971352    EFA06375.2    CM000364    EDX14897.1    CH480819    EDW53406.1    KQ980960    KYN11053.1    BT149840    AFK83748.1    AE014297    AB361435    AAF56937.1    BAJ05089.1    UFQS01002626    UFQT01002626    SSX14387.1    SSX33798.1    CM000160    EDW98251.1    PYGN01000580    PSN43891.1    CH964232    EDW81181.1    CH954182    EDV53181.1    DS232148    EDS36085.1    KQ435736    KOX77077.1    KQ434809    KZC06504.1    KQ982730    KYQ51538.1    KQ978068    KYM97616.1    KK852498    KDR22689.1    CP012526    ALC48046.1    CM000070    EAL27307.2    GEDC01009978    GEDC01000525    JAS27320.1    JAS36773.1    CH479179    EDW23810.1    GECZ01015964    JAS53805.1    CH940652    EDW59014.1    NEVH01006580    PNF37650.1    CH916377    EDV90796.1    CH919373    EDW04586.1    ADTU01030685    KQ414894    KOC59747.1    CH933806    EDW16255.1    GECU01012308    JAS95398.1    AXCN02001411    GL439921    EFN66586.1    OUUW01000007    SPP82920.1    ACPB03008738    AAAB01008963    EAA12045.4    GDHC01017965    JAQ00664.1    GBHO01006907    GBHO01006906    GBHO01006904    JAG36697.1    JAG36698.1    JAG36700.1    APCN01004903    KK854724    PTY18191.1    GAKP01007013    JAC51939.1    LBMM01003833    KMQ93074.1    ADMH02000457    ETN66403.1    ABLF02029076    GDIQ01247656    JAK04069.1    GDIQ01206268    JAK45457.1    GDIQ01249309    JAK02416.1    GDIQ01101654    JAL50072.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000283053    UP000007151    + More
UP000002358    UP000095300    UP000095301    UP000069940    UP000249989    UP000009046    UP000183832    UP000007801    UP000005203    UP000092445    UP000092460    UP000215335    UP000030742    UP000091820    UP000053097    UP000279307    UP000078540    UP000007266    UP000000304    UP000001292    UP000078492    UP000000803    UP000002282    UP000245037    UP000007798    UP000008711    UP000002320    UP000053105    UP000076502    UP000075809    UP000078542    UP000027135    UP000192221    UP000078200    UP000092443    UP000092553    UP000001819    UP000008744    UP000008792    UP000235965    UP000001070    UP000075900    UP000005205    UP000053825    UP000075880    UP000009192    UP000075886    UP000075902    UP000000311    UP000075903    UP000268350    UP000015103    UP000076407    UP000007062    UP000075840    UP000075884    UP000075881    UP000075920    UP000036403    UP000000673    UP000076408    UP000069272    UP000007819    UP000075882    UP000075885   

PRIDE

D4Q9I1    Q9VAH3   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR036291   NAD(P)-bd_dom_sf       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

D4Q9I1   A0A2A4JI37   A0A060Q0K2   A0A194PHU2   A0A194QS64   A0A3S2M4M5   + More
A0A212EPZ0   S4P318   K7J306   A0A1I8PCK7   A0A1I8N9B3   A0A182HAP1   E0VSJ3   A0A034WB66   A0A1I8N9A9   A0A0K8UPW8   A0A1Q3FS61   A0A1Y1LKZ5   A0A336M4K6   A0A1J1I8B0   B3MTJ0   A0A087ZTA4   A0A1B0A8W3   A0A1B0BZ77   A0A232EMD8   U4TY41   E9I9H5   J3JYH1   A0A1A9W6I3   A0A026W555   A0A195BX87   D6WSF7   B4R091   B4HZE9   A0A151IUF5   I3VPX6   Q9VAH3   A0A336LC86   B4PPK1   A0A2P8YI12   B4NBL7   B3P5D1   B0WWJ3   A0A0M9A4I9   A0A154P594   A0A151WUN3   A0A195CBN8   A0A067RSA4   A0A1W4URT6   A0A1A9UQ63   A0A1A9XMW0   A0A0M4EL31   Q29AP2   A0A1B6DNT4   B4G651   A0A1B6FUE5   B4M5T8   A0A2J7R9Z7   B4JYN4   B4K2K6   A0A1I8JUU4   A0A158NXK4   A0A0L7QM99   A0A182JGN0   B4K618   A0A1B6J899   A0A182QQW8   A0A182TRQ8   E2AIZ7   A0A182V2E1   A0A3B0K4J8   T1I0L0   A0A182WY31   Q7Q4T3   A0A146KVZ1   A0A0A9YUM4   A0A182HMT2   A0A182N0H3   A0A182K110   A0A182VV49   A0A2R7WFZ3   A0A034WB62   A0A0J7KS76   W5JT06   A0A182Y4T8   A0A182FIE9   J9KX18   A0A182KWA1   A0A182PL04   A0A0P5G1M5   A0A0P5J2U1   A0A0P5FYV4   A0A0P5RF26  

PDB

3V2H     E-value=4.41082e-11,     Score=162

KEGG

100422790    no KO assigned | (RefSeq) SDR1, BmSDR1; short-chain dehydrogenase/reductase

GO

GO:0016491   GO:0004745   GO:0016021   GO:0006697   GO:0004303   GO:0047035   GO:0003677   GO:0006355   GO:0005515   GO:0006415   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

306

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.56768

Exp number, first 60 AAs:

0.22451

Total prob of N-in:

0.07620

outside

1  -  306

 

 

Pi

24.470394

Theta

20.989635

Tajima's D

1.132332

CLR

0.021133

CSRT

0.702514874256287

Interpretation

Uncertain