SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10371
Pre Gene Modal
BGIBMGA007050
Annotation
PREDICTED:_TM2_domain-containing_protein_CG10795_[Plutella_xylostella]
Full name
TM2 domain-containing protein CG10795      
Location in the cell
PlasmaMembrane   Reliability : 2.338
 

Sequence

CDS
ATGATGAAACTTGTACATTCTGTACACGTCTACGTATGTTTGGTATTTTTGCTATCGATTACAGAAGCTTCCGATGAAGCTAAAGTTGATAAAGTGCATGTAGACTGCAGTACGTTAAGATTGGGACAATTTATTTGTCCAAACCCAAGTATTGATCAAATAGATCCAGACACACAACAATTCAGAGGATGTATAAAAGGAAAGGAAATTCCGTCCGAAGGTGAAGCCGAAGTGGAGTGTATAGCAGCTGATGGAATAATATGTAATGAAACAAAAAATGGAACATTTACAAGGAAACTACCATGTAAATGGACGAATGGATATTCTCTAGAAATTGCTTTATTACTATCTGTATTCCTGGGAATGTTTGGATTGGATCGCTTTTATTTGGGATATCCTGGAATGGGTTTAGCAAAACTATGTACTCTGGGATTCATGTTCCTCGGACAGTTATTAGACATTATATTAATAGCTGCACAGGTTGTGGGACCTTCAGATGGGTCTGCTTATGTCATTCCATATTATGGTGCTGGAGTTACTGTTGTTCGGAGTGATAATGAGACTTACCTACTACCACAACCAGATTGGCATAACATCACCTGA
Protein
MMKLVHSVHVYVCLVFLLSITEASDEAKVDKVHVDCSTLRLGQFICPNPSIDQIDPDTQQFRGCIKGKEIPSEGEAEVECIAADGIICNETKNGTFTRKLPCKWTNGYSLEIALLLSVFLGMFGLDRFYLGYPGMGLAKLCTLGFMFLGQLLDIILIAAQVVGPSDGSAYVIPYYGAGVTVVRSDNETYLLPQPDWHNIT

Summary

Similarity
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
Belongs to the TM2 family.
Keywords
Complete proteome   Glycoprotein   Membrane   Reference proteome   Signal   Transmembrane   Transmembrane helix  
Feature
chain  TM2 domain-containing protein CG10795
EMBL
BABH01014674    NWSH01001431    PCG71248.1    ODYU01003725    SOQ42866.1    GAIX01003675    + More
JAA88885.1    KQ461155    KPJ08361.1    KQ459603    KPI92984.1    JTDY01000512    KOB76835.1    RSAL01000036    RVE51284.1    AGBW02010202    OWR48977.1    GGFJ01009689    MBW58830.1    AXCM01016726    ATLV01024580    KE525352    KFB51704.1    DS232396    EDS41068.1    GGFL01000611    MBW64789.1    KQ971354    EFA07665.2    GAMD01001315    JAB00276.1    GFDL01007480    JAV27565.1    JXUM01034891    JXUM01034892    JXUM01034893    GAPW01004839    KQ561040    JAC08759.1    KXJ79922.1    GANO01000469    JAB59402.1    CH477833    EAT35814.1    AAAB01008807    EAA04638.3    GGFL01002253    MBW66431.1    KK852527    KDR22021.1    GDHF01032215    JAI20099.1    GAKP01000807    JAC58145.1    OUUW01000001    SPP72732.1    GBXI01000183    JAD14109.1    AJWK01013496    CM000071    EAL26650.2    CH479216    EDW33631.1    NNAY01000618    OXU27368.1    ADMH02000549    ETN65959.1    BT127763    AEE62725.1    DS235430    EEB15627.1    GBHO01007845    GBRD01008447    GDHC01013829    GDHC01001151    JAG35759.1    JAG57374.1    JAQ04800.1    JAQ17478.1    ADTU01011879    PYGN01000302    PSN48922.1    GFDF01011164    JAV02920.1    GFDF01011165    JAV02919.1    AAZX01007897    CH954179    EDV55452.1    APCN01000204    CH480824    EDW56624.1    CM000362    CM002911    EDX08066.1    KMY95532.1    CH963846    EDW72387.1    AE013599    AY061343    GECU01027868    GECU01001350    JAS79838.1    JAT06357.1    GDKW01002915    JAI53680.1    ACPB03015500    GEDC01022559    GEDC01007600    JAS14739.1    JAS29698.1    CM000158    EDW91250.1    CH940648    EDW61924.1    GAMC01001489    JAC05067.1    CH902619    EDV36152.1    KQ978619    KYN29756.1    KQ982934    KYQ49177.1    CH933808    EDW09369.1    GGMS01007018    MBY76221.1    GECL01001452    JAP04672.1    KK107034    QOIP01000008    EZA62050.1    RLU19278.1    GFTR01002667    JAW13759.1    CH916367    EDW00980.1    CP012524    ALC41618.1    JRES01000960    KNC26710.1    GEMB01003624    JAR99594.1    GL445930    EFN88771.1    APGK01019947    APGK01019948    KB740150    ENN81244.1    KB632173    ERL89569.1    KQ981727    KYN37031.1    GFXV01007306    MBW19111.1    ABLF02034513    AK341092    BAH71565.1    KQ414668    KOC64654.1    GL764306    EFZ17846.1    JXJN01022485    KZ288362    PBC26944.1    GL888417    EGI61248.1    GL434791    EFN74513.1   
Pfam
PF05154   TM2        + More
PF00083   Sugar_tr
PF07690   MFS_1
PF01607   CBM_14
PF13639   zf-RING_2
Interpro
IPR007829   TM2        + More
IPR003663   Sugar/inositol_transpt       
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR002557   Chitin-bd_dom       
IPR036508   Chitin-bd_dom_sf       
IPR011701   MFS       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
SUPFAM
SSF103473   SSF103473        + More
SSF57625   SSF57625       
Gene 3D

Ontologies

Topology

Subcellular location
Membrane  
SignalP
Position:   1 - 23,         Likelihood:  0.998580
 
 
Length:
200
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
49.68894
Exp number, first 60 AAs:
7.79454
Total prob of N-in:
0.68436
inside
1  -  105
TMhelix
106  -  125
outside
126  -  139
TMhelix
140  -  162
inside
163  -  200
 
 

Population Genetic Test Statistics

Pi
187.412605
Theta
193.28972
Tajima's D
-0.812993
CLR
2.293022
CSRT
0.176291185440728
Interpretation
Uncertain
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