Gene

KWMTBOMO10364

Annotation

PREDICTED:_tetratricopeptide_repeat_protein_25-like_[Amyelois_transitella]

Location

Bomo_Chr17(+):8510904-8513331      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.965

CDS

ATGATTGAAATAACAGTATTGAAGTTTATCATTTTGAGCCGATTATTGAGAATCGAAAACACTCTATTAACAGAACTAGAGCCGAGCAATCTGACGGCGCTACAAATTCGAGCGCAAACGGAATACGAAAAATGTGCTTTTGAACGTGCTCTTGTTATGGCGCATCAAGGTCAGCGCTTAGTAAGATTCCCTCCGGATTTTGCAGAATGCGCTCGCCATGCTGAAGAGACGATTCGAGAATGCGTTGGCAGCAGTGCTAGTAAAGTGCTTTCGGCAGCTGTTTCGCTTATAAGACGAGTGGAACTCAACAAGGAATCCATTGATTTAGATGCTTCAAGAGCACTGAAACATCGCAGCCGTATGCAAGCACAAGAAACTCAACAGGTTCAAGAAATATCTCGGGCAGAAAAACAAAAATACGAACAAATCTCCCGTTTAATGGCTTCGAAATACTTGGAACGAATGGCACACGACAAACATTTCTTAATATCTTTATGTAAGGACGAAAGACTTATCTCGGCCAACGCACAGGGCTCGAAGAAATTACAAGAATTGGCGACTAAAGCTTTGGCCGATGTCGAGAAACGTCAAGTTAGTTAG

Protein

MIEITVLKFIILSRLLRIENTLLTELEPSNLTALQIRAQTEYEKCAFERALVMAHQGQRLVRFPPDFAECARHAEETIRECVGSSASKVLSAAVSLIRRVELNKESIDLDASRALKHRSRMQAQETQQVQEISRAEKQKYEQISRLMASKYLERMAHDKHFLISLCKDERLISANAQGSKKLQELATKALADVEKRQVS

Uniprot

H9JC11   A0A2H1X2B2   A0A2A4K4T4   A0A0N1IPW1   A0A194QBB0   A0A212FK56   + More
A0A0L7K4M2   A0A194R0K7   A0A2W1BST4   A0A194PMJ7   A0A2A4K0Z3   A0A194R4J5   A0A212FAI4   A0A194PSW0   A0A194QZ96   H9JKU3   A0A1B6GWY4   E0VQD2   A0A232ERZ9   A0A1B6LBS6   A0A1B6JPQ7   K7JTX5   A0A0L7R1S1   C3YYE7  

Pubmed

19121390    26354079    22118469    26227816    28756777    20566863    + More
28648823    20075255    18563158   

EMBL

BABH01014627    ODYU01012865    SOQ59378.1    NWSH01000129    PCG79265.1    KQ459998    + More
KPJ18502.1    KQ459232    KPJ02828.1    AGBW02008157    OWR54089.1    JTDY01011566    KOB55545.1    KQ460930    KPJ10780.1    KZ149930    PZC77401.1    KQ459600    KPI94213.1    NWSH01000258    PCG77941.1    KPJ10781.1    AGBW02009472    OWR50741.1    KPI94215.1    KPJ10782.1    BABH01011540    GECZ01002821    JAS66948.1    DS235418    EEB15588.1    NNAY01002549    OXU21076.1    GEBQ01018856    JAT21121.1    GECU01006507    JAT01200.1    AAZX01006212    KQ414667    KOC64783.1    GG666565    EEN54587.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000009046    UP000215335    UP000002358    UP000053825    UP000001554   

PRIDE

H9JC11    H9JKU3   

Pfam

PF00088   Trefoil

Interpro

IPR013026   TPR-contain_dom        + More
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
IPR040111   TTC25       
IPR000519   P_trefoil_dom       
IPR017957   P_trefoil_CS       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

CDD

cd00111  Trefoil

ProteinModelPortal

H9JC11   A0A2H1X2B2   A0A2A4K4T4   A0A0N1IPW1   A0A194QBB0   A0A212FK56   + More
A0A0L7K4M2   A0A194R0K7   A0A2W1BST4   A0A194PMJ7   A0A2A4K0Z3   A0A194R4J5   A0A212FAI4   A0A194PSW0   A0A194QZ96   H9JKU3   A0A1B6GWY4   E0VQD2   A0A232ERZ9   A0A1B6LBS6   A0A1B6JPQ7   K7JTX5   A0A0L7R1S1   C3YYE7  

KEGG

101736591    no KO assigned | (RefSeq) uncharacterized LOC101736591

GO

GO:0005737   GO:0016021  

PANTHER

PTHR23040  

Length:

199

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0003

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.04517

outside

1  -  199

 

 

Pi

163.545095

Theta

172.511945

Tajima's D

-0.411453

CLR

127.352155

CSRT

0.265286735663217

Interpretation

Uncertain