Silkworm Genome Informatics Database

Gene

KWMTBOMO10363

Pre Gene Modal

BGIBMGA007056

Annotation

hypothetical_protein_KGM_19933_[Danaus_plexippus]

Location

Bomo_Chr17(+):8506904-8509048 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.728 Nuclear Reliability : 1.203

CDS

ATGAGGAAAAAATTAGTGCCGGAAGAGAAACCTATATGTAATGCGGTCGCTGTATTCAGGGAAAGAGGTAATTACCTACAACGGCTAGAACAATTTGAGAAAGCCATACAAGCGTACAATGAAGCTCTTCGTTGGAATAGCTCAGACGTACGGTCGTTGATTGGTCGGAGCGTAGCGCGAGCGAAGTCCACTTATTACAACGGAGCTCTGGCAGACGCAGCTAGGGCTGCTGGTGAGTCATTATTAAATGCAACATTTAAATAA

Protein

MRKKLVPEEKPICNAVAVFRERGNYLQRLEQFEKAIQAYNEALRWNSSDVRSLIGRSVARAKSTYYNGALADAARAAGESLLNATFK

Uniprot

A0A212FK56 A0A2A4K4T4 A0A0N1IPW1

Pubmed

22118469 26354079

EMBL

AGBW02008157 OWR54089.1 NWSH01000129 PCG79265.1 KQ459998 KPJ18502.1 + More

Proteomes

UP000007151 UP000218220 UP000053240

Interpro

IPR011990   TPR-like_helical_dom_sf        + More
IPR019734   TPR_repeat
IPR013026   TPR-contain_dom

SUPFAM

SSF48452 SSF48452

Gene 3D

1.25.40.10

ProteinModelPortal

A0A212FK56 A0A2A4K4T4 A0A0N1IPW1

KEGG

101736591 no KO assigned | (RefSeq) uncharacterized LOC101736591

GO

GO:0005515 GO:0008417 GO:0016020 GO:0006415 GO:0016021 GO:0006418 GO:0003723 GO:0046872 GO:0003824

Length:

87

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00426

Exp number, first 60 AAs:

8e-05

Total prob of N-in:

0.45810

outside

1 - 87

Pi

168.61259

Theta

140.942202

Tajima's D

0.558696

CLR

0

CSRT

0.536173191340433

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics