Gene

KWMTBOMO10353

Pre Gene Modal

BGIBMGA009311

Annotation

PREDICTED:_uncharacterized_protein_LOC105841282_[Bombyx_mori]

Location

Bomo_Chr17(-):8243129-8247364      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.799

CDS

ATGGATTCGTTAAAACCACCGCCACCATTATGCCTCATGGGCGACTTGAAACAAAATTTTCAAAAATGGACACAGCAATATGATATTTATATGATTGCTAGCGGGACGGAAGGTGATGAAAAAATTAAAGATAAGCAGAAAAAGGCAATCTATTTGCACTGCCTAGGTGCAGAAGCACTAACCATATACAATGGTTTTAAGAACAAAGAAAAGTTATCTTATGTGGAAGTAAAACAGAAGTTTAATGAATATTGTTCGCCACCCGGAAATGAAACTTTTAGTAGACATGTCTTCTTCAGCAGAAAAAAGAGAGATGGAGAAAGTTTTGATGAATTTTTCTGTACGTTGAGAAAATTGGCGGGAGACTGTGGGTTTGCAGACCTAGAAGAAAGCTTAATAAGAGACCAAATCATATTAGGCTTAAATGATGCCAAATTAACAGAAAGATTGCTTAAGGAATCGACCTTAACATTGGATAGCTGCATGAAAATATGTAAAGTGGCTGAGAGTGCTGCAAAACAGGTTCAAGTCATGACAGAAAAGACAGTTGAAGCTGTTACAAGAAAACAAGAATCTCGAAGCAGAATGCCTAATCAGAATAAAACCAGTTTTAATAATAAACAACATCTAGGTAAGAGTGCAGAAGGATCAGTAAGGCTGAAGAATAATAATTGTGAAAGATGCGGAGGAGTGCATTCTCATCGATCCTGCCCAGCCTTTGGAAGGAGATGTGCTAAGTGTAATCGATATGGACATTACATGCAGATGTGCAGAACAGTTGGTGCTGTGTATGTCAGCGATGATGATAGTGATGACTCATTAGTAGTGGGGTCAGTAACTGTGGGCCAGGTTGATACAGAGGACTGGATCGTTGAGGCAAAAGTGAGAGGACAGAAGATGAAGTTCAAAGTGGATACAGGATCGCAGGTTAATATTTTGACTAGTGCTATAGTGAAAAAACTAGACTTAAAAATGACAGAAACTTGTACAAAATTAAAAAACTTTGATGGCTCAACTATAGAAACAGTAGGTATGACTAAAACTATAGTGAAATTCAATAAAAAAAAGTATGTACTTGACTTTTATGTGGTAAAATTTAAAACTACTAATGTGCTGAGCTATAAAGCTGCTGTGCAGTTGGGTTTAATAAACAAAGTTGAAAATATTTCAAAGGAATATGTAGTTCAGGACATTGGTGAATACAAAGATTTGTTTCATGGCTTAGGAAAATTGAACTATGTATACAAAATTAAATTAACAGACAATTGTGCACCTGTAGTGGAGCCACCAAGGAAAATTCCTTTTAAATTAGTAGATAAAGTAAAAAATGAGCTTGATCGATTGGAGCAACTTGATGTAATAAAGAAAGTGCAAGAACCAACTGAGTGGGTTAACTCTATGGCTTATTTGAGTAAAGAAAGGGAGATGTCATGTGAGGATACTTATTGGAATAAGCTGTGGTTGACATGTACGGGAGACGGCACTACAGAATAA

Protein

MDSLKPPPPLCLMGDLKQNFQKWTQQYDIYMIASGTEGDEKIKDKQKKAIYLHCLGAEALTIYNGFKNKEKLSYVEVKQKFNEYCSPPGNETFSRHVFFSRKKRDGESFDEFFCTLRKLAGDCGFADLEESLIRDQIILGLNDAKLTERLLKESTLTLDSCMKICKVAESAAKQVQVMTEKTVEAVTRKQESRSRMPNQNKTSFNNKQHLGKSAEGSVRLKNNNCERCGGVHSHRSCPAFGRRCAKCNRYGHYMQMCRTVGAVYVSDDDSDDSLVVGSVTVGQVDTEDWIVEAKVRGQKMKFKVDTGSQVNILTSAIVKKLDLKMTETCTKLKNFDGSTIETVGMTKTIVKFNKKKYVLDFYVVKFKTTNVLSYKAAVQLGLINKVENISKEYVVQDIGEYKDLFHGLGKLNYVYKIKLTDNCAPVVEPPRKIPFKLVDKVKNELDRLEQLDVIKKVQEPTEWVNSMAYLSKEREMSCEDTYWNKLWLTCTGDGTTE

Uniprot

A0A087U9K1   A0A2G8KKG5   A0A3P8Q6C6   A0A3P9HT22   A0A1A8UGA0   A0A3B3C9X5   + More
A0A3P8S414   A0A3P8RKT7   A0A3P8PD24   A0A3P9AYU2   A0A3B1JKR1   A0A3P8RHF8   A0A3B3I1S4   A0A146TAZ6   A0A3P9M8I3   A0A2G8L9H5   A0A2S2N8I3   A0A0A9WVK6   A0A146SN99   A0A3B3HLX7   A0A3P9HXP1   A0A2G8LMB1   X1WTY2   I3KYE2   A0A3P8QAD1   A0A1Y1MUX5   A0A2G8KFU3   L7LWW6   A0A2G8KHQ8   A0A0A9WHB1   A0A1Y1KPK9   A0A212FHD4   A0A3Q2XZ76   A0A147BKR8   A0A1A8D4P4   A0A1Y1MZH6   A0A3Q0J4U3   A0A1Y1LVD1   A0A1Y1LNL5   A0A1Y1JV53   J9LDY4   A0A2S2NI46   A0A1Y1NHV7   A0A1A8IVJ0   A0A1Y1M671   J9M4C2   A0A1Y1L7V1   A0A3S3NA82   A0A1Y1K454   J9LYD2   A0A147BIX9   I3KX76   A0A0P4VZQ4   A0A075EIL5   J9LNB8   A0A1S3ICH8   A0A069DZS8   J9M6I9   A0A069DY08   A0A1S3JEC7   J9JQ26   A0A3S2N4F0   A0A293LIZ7   A0A131Y4S4   A0A1S3HTD1   A0A2I4C5Y1   A0A3P9CYY5   A0A3B3HZT8   A0A146YPR2   A0A3S2P917   A0A087UXZ8   A0A3B3I9J4   A0A023EY30   A0A3P8R3E5   A0A3B3IB43   A0A1S3DM59   A0A3B3SZ39   A0A2G8KBJ0   A0A3P8P4R7   A0A1Y1MCJ7   W4Z3X1   A0A3P8PX12   J9L288   A0A3B3D0A0   A0A131Y3D2   A0A2B4S589   A0A1A8HWB9   A0A3B3C9Q2   A0A1Y1NDC5   A0A3P8TBN5   A0A3B3I4M1   A0A0J7K756   A0A267DME8   A0A1A8V426   A0A3P9JKX9   A0A1A8CXN4   W4XRM9  

Pubmed

29023486    17554307    29451363    25186727    25329095    25401762    + More
28004739    25576852    22118469    29652888    27129103    25201971    26334808    25474469    29240929   

EMBL

KK118858    KFM74040.1    MRZV01000519    PIK48493.1    HADY01023773    HAEJ01006887    + More
SBS47344.1    GCES01096219    JAQ90103.1    MRZV01000161    PIK56894.1    GGMR01000868    MBY13487.1    GBHO01031825    JAG11779.1    GCES01104253    JAQ82069.1    MRZV01000033    PIK61397.1    ABLF02013930    ABLF02013934    AERX01070080    GEZM01020000    JAV89472.1    MRZV01000618    PIK46835.1    GACK01009641    JAA55393.1    MRZV01000576    PIK47528.1    GBHO01036465    JAG07139.1    GEZM01079607    GEZM01079598    JAV62391.1    AGBW02008504    OWR53150.1    GEGO01004362    JAR91042.1    HADZ01022257    SBP86198.1    GEZM01016880    JAV91071.1    GEZM01051395    JAV74977.1    GEZM01050997    GEZM01050995    JAV75219.1    GEZM01102055    GEZM01102054    GEZM01102053    GEZM01102051    JAV52011.1    ABLF02010707    GGMR01004179    MBY16798.1    GEZM01001973    JAV97431.1    HAED01014930    SBR01375.1    GEZM01041944    JAV80090.1    ABLF02038957    GEZM01066276    JAV68015.1    NCKU01019406    RWR98729.1    GEZM01097791    JAV54106.1    ABLF02041541    GEGO01004665    JAR90739.1    AERX01076149    GDKW01000526    JAI56069.1    KF319019    AIE48224.1    ABLF02008456    GBGD01000115    JAC88774.1    ABLF02007384    GBGD01000119    JAC88770.1    ABLF02019772    CM012440    RVE73710.1    GFWV01003962    MAA28692.1    GEFM01002416    JAP73380.1    GCES01030230    JAR56093.1    CM012446    RVE67610.1    KK122208    KFM82237.1    GBBI01004745    JAC13967.1    MRZV01000718    PIK45343.1    GEZM01035137    JAV83383.1    AAGJ04086364    AAGJ04086365    ABLF02022355    ABLF02022359    ABLF02022361    ABLF02022365    ABLF02041467    GEFM01002429    JAP73367.1    LSMT01000199    PFX23692.1    HAED01002821    SBQ88678.1    GEZM01011167    JAV93617.1    LBMM01012476    KMQ86207.1    NIVC01004071    NIVC01003836    NIVC01003668    PAA48739.1    PAA49587.1    PAA50326.1    HAEJ01014648    SBS55105.1    HADZ01020631    HADZ01021503    HAEA01008283    HAEA01008803    SBP84572.1    SBP85444.1    AAGJ04028399    AAGJ04028400   

Proteomes

UP000054359    UP000230750    UP000265100    UP000265200    UP000261560    UP000265080    + More
UP000265160    UP000018467    UP000001038    UP000265180    UP000007819    UP000005207    UP000007151    UP000264820    UP000079169    UP000285301    UP000085678    UP000192220    UP000261540    UP000007110    UP000225706    UP000036403    UP000215902   

Pfam

PF00078   RVT_1        + More
PF17921   Integrase_H2C2
PF17919   RT_RNaseH_2
PF00665   rve
PF03732   Retrotrans_gag
PF13330   Mucin2_WxxW
PF17917   RT_RNaseH

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR000477   RT_dom       
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       
IPR001878   Znf_CCHC       
IPR012337   RNaseH-like_sf       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR001995   Peptidase_A2_cat       
IPR005162   Retrotrans_gag_dom       
IPR001969   Aspartic_peptidase_AS       
IPR036875   Znf_CCHC_sf       
IPR000679   Znf_GATA       
IPR007110   Ig-like_dom       
IPR013320   ConA-like_dom_sf       
IPR025155   WxxW_domain       
IPR041373   RT_RNaseH       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF57756   SSF57756       
SSF49899   SSF49899       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A087U9K1   A0A2G8KKG5   A0A3P8Q6C6   A0A3P9HT22   A0A1A8UGA0   A0A3B3C9X5   + More
A0A3P8S414   A0A3P8RKT7   A0A3P8PD24   A0A3P9AYU2   A0A3B1JKR1   A0A3P8RHF8   A0A3B3I1S4   A0A146TAZ6   A0A3P9M8I3   A0A2G8L9H5   A0A2S2N8I3   A0A0A9WVK6   A0A146SN99   A0A3B3HLX7   A0A3P9HXP1   A0A2G8LMB1   X1WTY2   I3KYE2   A0A3P8QAD1   A0A1Y1MUX5   A0A2G8KFU3   L7LWW6   A0A2G8KHQ8   A0A0A9WHB1   A0A1Y1KPK9   A0A212FHD4   A0A3Q2XZ76   A0A147BKR8   A0A1A8D4P4   A0A1Y1MZH6   A0A3Q0J4U3   A0A1Y1LVD1   A0A1Y1LNL5   A0A1Y1JV53   J9LDY4   A0A2S2NI46   A0A1Y1NHV7   A0A1A8IVJ0   A0A1Y1M671   J9M4C2   A0A1Y1L7V1   A0A3S3NA82   A0A1Y1K454   J9LYD2   A0A147BIX9   I3KX76   A0A0P4VZQ4   A0A075EIL5   J9LNB8   A0A1S3ICH8   A0A069DZS8   J9M6I9   A0A069DY08   A0A1S3JEC7   J9JQ26   A0A3S2N4F0   A0A293LIZ7   A0A131Y4S4   A0A1S3HTD1   A0A2I4C5Y1   A0A3P9CYY5   A0A3B3HZT8   A0A146YPR2   A0A3S2P917   A0A087UXZ8   A0A3B3I9J4   A0A023EY30   A0A3P8R3E5   A0A3B3IB43   A0A1S3DM59   A0A3B3SZ39   A0A2G8KBJ0   A0A3P8P4R7   A0A1Y1MCJ7   W4Z3X1   A0A3P8PX12   J9L288   A0A3B3D0A0   A0A131Y3D2   A0A2B4S589   A0A1A8HWB9   A0A3B3C9Q2   A0A1Y1NDC5   A0A3P8TBN5   A0A3B3I4M1   A0A0J7K756   A0A267DME8   A0A1A8V426   A0A3P9JKX9   A0A1A8CXN4   W4XRM9  

KEGG

105842116    no KO assigned | (RefSeq) uncharacterized LOC105842116

GO

GO:0003676   GO:0015074   GO:0004190   GO:0008270   GO:0006355   GO:0043565   GO:0005634  

Length:

497

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01467

Exp number, first 60 AAs:

0.0092

Total prob of N-in:

0.00078

outside

1  -  497

 

 

Pi

139.213354

Theta

148.671973

Tajima's D

0.181425

CLR

1.773981

CSRT

0.420178991050447

Interpretation

Uncertain