Gene

KWMTBOMO10336

Pre Gene Modal

BGIBMGA007243

Annotation

defective_in_cullin_neddylation_protein_[Bombyx_mori]

Location

Bomo_Chr17(+):7836113-7837635      View in EpiBrowser

Full name

Defective in cullin neddylation protein      

Location in the cell

Nuclear   Reliability : 3.305

CDS

ATGGGCCACTGTCTCAGCTGTTTCAAATCTCAAGCTAATGCTGAAATAAGAAGTATCACAGGACCCCACGCAAAAAATGATGAGGTGACAGATATATCTGTTTCTGTGTCAGTTTATCCTCAAGTGGAGCCCCTTTTAAGTACTAGTGAAAATAATTTGAATACAAACATGAATAACTTGAAAGTATTGAACTCTTTTGGTGAACAAAGTTCATGTGATCCATTAAATGTGCAGAAAAACTTAGTTTGTGAAAAAACTCCTAAACTATTCAACCCAAAGTTACCATCAATTCCACGGACAATGTCATCACTAGGATCAAGTGAGAAGATATCAGAAACCAAAATAAATCTGTTATTTAACCAATATAAAGATTCTATAGAAGACGCTATCTTAGCAGAAGGCATTGAAAATCTATGTAATGACCTTAATTTAAGTCCTGATGATTTTAAAGTTTTAATATTGGCATGGAAGTTAAATGCTAGTCAAATGTGTAGATTTACAAAGTCCGAGTTTGTTCAAGGCCTAAAAAATATGAAAACTGATTCAATTAAAGGTATACAACACAAATTAGGTGACATATCTGTTGAAATGCAAAGAGAACCAGAGCAATTTAAGGATTTGTATAGATTTACCTTTAAGTTTGGGCTAGATGTTAGTTCTGGACAAAGAATCTTACCTTCAGATATAGCTATTGTTTTGTGGCGCTTAGTTTTCACAAATAATGAGCCTCCAATCTTGGATCGATGGCTGAATTACCTTGAGAAGAACCCACAAATCAGAGGCATTCCAAAAGATACATGGTACATGTTTTTAAATTTTTGTGAGTTTGTTGGAAATGATCTCAGCAGCTATGATGACACGGAAGCATGGCCCAGTTTGTTTGATGATTTCGTTGAATATGAAAATGATCAAGTTAATCAAAATGTAACCAAAAGCAGCATAAAAATTCAGGATTAA

Protein

MGHCLSCFKSQANAEIRSITGPHAKNDEVTDISVSVSVYPQVEPLLSTSENNLNTNMNNLKVLNSFGEQSSCDPLNVQKNLVCEKTPKLFNPKLPSIPRTMSSLGSSEKISETKINLLFNQYKDSIEDAILAEGIENLCNDLNLSPDDFKVLILAWKLNASQMCRFTKSEFVQGLKNMKTDSIKGIQHKLGDISVEMQREPEQFKDLYRFTFKFGLDVSSGQRILPSDIAIVLWRLVFTNNEPPILDRWLNYLEKNPQIRGIPKDTWYMFLNFCEFVGNDLSSYDDTEAWPSLFDDFVEYENDQVNQNVTKSSIKIQD

Description

Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.

Feature

chain  Defective in cullin neddylation protein

Uniprot

Q2F6B6   H9JCJ8   A0A2A4JSH4   A0A2H1VFX5   A0A0L7LNU0   A0A3S2PH29   + More
A0A1E1W8K2   A0A194QBL9   A0A194QRL1   A0A212EKL9   S4PY88   A0A067QSX7   A0A1B6KV69   A0A1B6DHY9   A0A0P4VIK1   A0A1B6JTB1   A0A1B6G574   A0A2J7RIS6   T1HB94   A0A069DR21   A0A224XUH0   A0A0V0GCV0   A0A2R7WPJ5   A0A1W4WRJ8   K7IWX8   E2BZ66   A0A0M8ZZH3   A0A1W4WGN0   A0A0L7QWE0   A0A151HZ94   A0A158NNS9   A0A0J7L125   F4WEX2   V9IJS3   A0A151J3H4   A0A088ABM7   A0A195C3P1   A0A195FSD8   A0A026WG51   A0A2A3E019   E9ITN6   A0A154P5X5   A0A0C9RWD6   A0A0P4WED3   N6SS69   U4U0N5   A0A0A9WVT3   A0A0K8SXC7   T1JNZ5   K1Q2P2   A0A210QNI6   A0A2H8TNF2   J9K228   A0A2C9JFR8   A0A3S1AZD2   A0A2P6KZQ3   A0A2P2HZ65   A0A2L2Y7L5   A0A0L8G670   Q16HN1   A0A1L8DSU2   B0WVT8   A0A0K8TPA6   A0A1Q3F7J2   A0A1S3HKJ3   A0A182N9J8   A0A1Q3F7C4   A0A1I8NXA6  

Pubmed

19121390    26227816    26354079    22118469    23622113    24845553    + More
27129103    26334808    20075255    20798317    21347285    21719571    24508170    30249741    21282665    23537049    25401762    26823975    22992520    28812685    15562597    26561354    17510324    26369729   

EMBL

DQ311156    ABD36101.1    BABH01039071    NWSH01000726    PCG74564.1    ODYU01002084    + More
SOQ39144.1    JTDY01000451    KOB77117.1    RSAL01000036    RVE51253.1    GDQN01009303    GDQN01007787    JAT81751.1    JAT83267.1    KQ459232    KPJ02809.1    KQ461155    KPJ08127.1    AGBW02014242    OWR42031.1    GAIX01003713    JAA88847.1    KK852980    KDR12988.1    GEBQ01024833    JAT15144.1    GEDC01021209    GEDC01011977    JAS16089.1    JAS25321.1    GDKW01002846    JAI53749.1    GECU01005314    JAT02393.1    GECZ01012192    JAS57577.1    NEVH01003493    PNF40745.1    ACPB03010566    GBGD01002371    JAC86518.1    GFTR01004673    JAW11753.1    GECL01000302    JAP05822.1    KK855021    PTY20345.1    AAZX01012116    GL451577    EFN78972.1    KQ435812    KOX72783.1    KQ414716    KOC62881.1    KQ976693    KYM77655.1    ADTU01002767    LBMM01001505    KMQ96179.1    GL888112    EGI67243.1    JR050613    AEY61315.1    KQ980284    KYN16953.1    KQ978344    KYM94798.1    KQ981285    KYN43207.1    KK107234    QOIP01000013    EZA54918.1    RLU15450.1    KZ288511    PBC25115.1    GL765612    EFZ16067.1    KQ434823    KZC07319.1    GBYB01013260    JAG83027.1    GDRN01069706    JAI63999.1    APGK01058525    KB741291    ENN70494.1    KB630245    KB630279    KB631948    ERL83494.1    ERL83512.1    ERL87414.1    GBHO01031039    GBHO01031037    GDHC01007747    GDHC01005602    JAG12565.1    JAG12567.1    JAQ10882.1    JAQ13027.1    GBRD01007947    JAG57874.1    JH432011    JH817229    EKC28213.1    NEDP02002665    OWF50307.1    GFXV01003888    MBW15693.1    ABLF02037585    RQTK01000690    RUS76052.1    MWRG01003225    PRD31798.1    IACF01001339    LAB67049.1    IAAA01009630    LAA03997.1    KQ423610    KOF72532.1    CH478158    EAT33761.1    GFDF01004650    JAV09434.1    DS232132    EDS35770.1    GDAI01001615    JAI15988.1    GFDL01011587    JAV23458.1    GFDL01011580    JAV23465.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000283053    UP000053268    UP000053240    + More
UP000007151    UP000027135    UP000235965    UP000015103    UP000192223    UP000002358    UP000008237    UP000053105    UP000053825    UP000078540    UP000005205    UP000036403    UP000007755    UP000078492    UP000005203    UP000078542    UP000078541    UP000053097    UP000279307    UP000242457    UP000076502    UP000019118    UP000030742    UP000005408    UP000242188    UP000007819    UP000076420    UP000271974    UP000053454    UP000008820    UP000002320    UP000085678    UP000075884    UP000095300   

PRIDE

Q2F6B6    H9JCJ8   

Pfam

PF03556   Cullin_binding

Interpro

IPR005176   PONY_dom        + More
IPR014764   DCN-prot       

ProteinModelPortal

Q2F6B6   H9JCJ8   A0A2A4JSH4   A0A2H1VFX5   A0A0L7LNU0   A0A3S2PH29   + More
A0A1E1W8K2   A0A194QBL9   A0A194QRL1   A0A212EKL9   S4PY88   A0A067QSX7   A0A1B6KV69   A0A1B6DHY9   A0A0P4VIK1   A0A1B6JTB1   A0A1B6G574   A0A2J7RIS6   T1HB94   A0A069DR21   A0A224XUH0   A0A0V0GCV0   A0A2R7WPJ5   A0A1W4WRJ8   K7IWX8   E2BZ66   A0A0M8ZZH3   A0A1W4WGN0   A0A0L7QWE0   A0A151HZ94   A0A158NNS9   A0A0J7L125   F4WEX2   V9IJS3   A0A151J3H4   A0A088ABM7   A0A195C3P1   A0A195FSD8   A0A026WG51   A0A2A3E019   E9ITN6   A0A154P5X5   A0A0C9RWD6   A0A0P4WED3   N6SS69   U4U0N5   A0A0A9WVT3   A0A0K8SXC7   T1JNZ5   K1Q2P2   A0A210QNI6   A0A2H8TNF2   J9K228   A0A2C9JFR8   A0A3S1AZD2   A0A2P6KZQ3   A0A2P2HZ65   A0A2L2Y7L5   A0A0L8G670   Q16HN1   A0A1L8DSU2   B0WVT8   A0A0K8TPA6   A0A1Q3F7J2   A0A1S3HKJ3   A0A182N9J8   A0A1Q3F7C4   A0A1I8NXA6  

PDB

4GBA     E-value=5.58951e-59,     Score=575

KEGG

692802    K17823 DCN1-like protein 3 | (RefSeq) defective in cullin neddylation protein

GO

PANTHER

PTHR12281  

Length:

318

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00430999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01412

outside

1  -  318

 

 

Pi

167.628322

Theta

157.933421

Tajima's D

0.062826

CLR

0

CSRT

0.380630968451577

Interpretation

Uncertain