SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10335
Pre Gene Modal
BGIBMGA007231
Annotation
PREDICTED:_uncharacterized_protein_LOC106142568_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.126
 

Sequence

CDS
ATGAGCACATTCGAAGACGACTGGAATTTCCAGATAAATATTGAAGACATTGAAAAGAAGAATTTTGAAGAGTTCGAGAAAAGCCTACGTTATATAAATGACCATGTTTTCAAACTGTTAGAAGAAACATTCAAAACTCAGCGTCTTGATTATAATTGTGGTACTGGCCGCAGTCACGACGAAGAACTTAAATTACTTATTGATAAGAACAAACAATTACGACAAGAAGTTGATAACAAAACTAATGAGATTTTAATTCTTCAAACTAAATATGAGAACTATAAAAAAGATCAAAAACTGTTATCACAAGAAGTCAAAGAAACTCATGAAGCCTATTTGCTAACTAAGAAATTTTACAAAAAAAAATTAAAGATGTATTATGCTATTGAGTCAAGGGAAGCTGAAAAAGAAACAATATTTATTCAGTTTTTTACTGAGTGTAAAAAAGATCCAGAAAACTATTCTGTAAGACTTTTAAGGAACACTAAACTAAGACATTATCAAATATTGCAGATATCACCTAAAATTAAAATTGAAAAAGAACTTAAACAAAAAATTTACATCCCAGATGACGTATCTGCATTATTATGTTGTATAAGACAGGAATTTCTCAACATTAAACAAAATAAAGTATAA
Protein
MSTFEDDWNFQINIEDIEKKNFEEFEKSLRYINDHVFKLLEETFKTQRLDYNCGTGRSHDEELKLLIDKNKQLRQEVDNKTNEILILQTKYENYKKDQKLLSQEVKETHEAYLLTKKFYKKKLKMYYAIESREAEKETIFIQFFTECKKDPENYSVRLLRNTKLRHYQILQISPKIKIEKELKQKIYIPDDVSALLCCIRQEFLNIKQNKV

Summary

Pfam
PF08234   Spindle_Spc25
Interpro
IPR013255   Spc25       

Ontologies

GO

Topology

Length:
211
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00037
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05986
outside
1  -  211
 
 

Population Genetic Test Statistics

Pi
139.697018
Theta
139.395064
Tajima's D
-0.904865
CLR
0
CSRT
0.153442327883606
Interpretation
Uncertain
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