Gene

KWMTBOMO10324

Annotation

PREDICTED:_28S_ribosomal_protein_S7?_mitochondrial_[Papilio_xuthus]

Location

Bomo_Chr17(-):7648413-7651212      View in EpiBrowser

Full name

28S ribosomal protein S7, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 2.831

CDS

ATGTCTAATGTACTAATTTTTTTTTATCGACGGTTAAAAAACTCCAGCTTCAATTCATCTACAAGAACACTATCAAAACTCCAAATTCGAAATTATGCGAAGGCGACAAGCTTTCCAGACTATTATCAAAATCCAATATTTAGAAAAGAAGATCAAGTGAAACTCATTGCAGATTCGGATTTGAAGAACCGAGCAACTGTACCTGTGAAGCCACCTACGGTTTCTGAAACGTCTTCCGTTTACTTTGATCCTCTCGTTAATAAAGTCATCAACCATGTGATGGAAAAAGGTAACAAACGATTGGCTCGTCAACTCGTTGAGAAAGCATTCGAAAATATCAAAAGGAAACAAATTGAACGATACCATTTGGCTTCTACACCAGAAGAAAAAGCCAAAATAGAGTTAAATCCTAAGGACATTTTATATAAAGCCGTTGAAAATTGCAAACCATTGTTACAATTACAGCCCATCAAGAGGGGTGGTATCACATACCAGGTGCCTGGACCAATCACTGAAAAAAGATCATTATTTTTAGCAATTAAATGGTTACTAGAGACAACAGATGAAAAAGAAAGAACTGTTCATTTCCCTGAGCAGTTTGCTTGGGAACTCCTTGAAGCTTCAAACAATACTGGCAAAGTTGTAAAGAGAAAACAAGATTTACATCGGCAATGTGAAGCTAACAGAGCATATGCGCACTACAGGTGGCAATAA

Protein

MSNVLIFFYRRLKNSSFNSSTRTLSKLQIRNYAKATSFPDYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPIKRGGITYQVPGPITEKRSLFLAIKWLLETTDEKERTVHFPEQFAWELLEASNNTGKVVKRKQDLHRQCEANRAYAHYRWQ

Subunit

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

Similarity

Belongs to the universal ribosomal protein uS7 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  28S ribosomal protein S7, mitochondrial

Uniprot

A0A194QH41   A0A2A4JLG8   A0A2H1VLV9   A0A194QX77   A0A212EZS2   A0A3S2NPH7   + More
A0A0L7LET9   W5JC13   A0A2M4AKT6   A0A2M4AKM8   A0A2M4BYP8   A0A2M4BZ98   A0A2M3Z642   T1E8K1   A0A084VNJ9   A0A2M3Z6D5   A0A182F2P5   A0A182JVL6   A0A182VTS5   A0A182PAS4   A0A182NB19   A0A182ICN8   A0A182L605   A0A182UY27   A0A182TYR3   Q7Q1V7   A0A182Y8E6   A0A182J9Z1   A0A182QND8   A0A182G4H5   Q17CL6   A0A182RCC5   A0A182MM93   A0A1Q3G340   A0A1W4WTZ3   A0A1W4WV03   A0A1D2MK97   A0A1Y1MDR2   A0A1L8DRH5   A0A1L8DRR3   A0A0P6A454   A0A0N8AF22   A0A336LV60   A0A0P5D056   A0A0P5DLA0   A0A0P6AKQ2   A0A1B0CDR6   A0A0P5RDJ2   A0A0N8CET6   A0A0P5GLS4   A0A0P5JC87   A0A0P6I473   J3JXP0   D6WXT5   A0A0P5PFM8   A0A067QQP8   E9FUU9   A0A0P5RCY8   A0A0P5CGM8   A0A0P5Q5J0   A0A1A9UT77   A0A1A9ZVP1   A0A1B0FQ04   A0A1I8PHX7   A0A034WJU4   W8C5N5   K7J4T6   A0A1A9WLB4   A0A0A1X2H2   A0A0K8VFX8   A0A1I8MXK9   A0A1B0BD32   A0A232FCL2   A0A1A9Y6Y2   A0A2H8THN6   B4NZN1   A0A0R1DSK1   A0A154P5Y3   A0A2P6KKT7   A0A0Q5WAA7   B3N9N5   A0A0K8TSX1   B3MJG4   B4HWN0   A0A1W4UU57   B4Q985   A0A2S2QZW4   A0A026WNC3   C4WVL9   M9PCL5   Q9VKX4   A0A3B0KD93   A0A2R7X5J0   A0A2S2N9T4   A0A087U3U6   A0A023F2Z9   A0A131XXH9  

Pubmed

26354079    22118469    26227816    20920257    23761445    24438588    + More
20966253    12364791    14747013    17210077    25244985    26483478    17510324    27289101    28004739    22516182    23537049    18362917    19820115    24845553    21292972    25348373    24495485    20075255    25830018    25315136    28648823    17994087    17550304    26369729    22936249    24508170    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25474469   

EMBL

KQ459232    KPJ02761.1    NWSH01001098    PCG72616.1    ODYU01003098    SOQ41422.1    + More
KQ461155    KPJ08176.1    AGBW02011226    OWR47005.1    RSAL01000776    RVE41157.1    JTDY01001423    KOB73894.1    ADMH02001646    ETN61601.1    GGFK01008085    MBW41406.1    GGFK01007961    MBW41282.1    GGFJ01009076    MBW58217.1    GGFJ01009080    MBW58221.1    GGFM01003241    MBW23992.1    GAMD01002698    JAA98892.1    ATLV01014759    KE524984    KFB39543.1    GGFM01003336    MBW24087.1    APCN01005735    AAAB01008980    EAA14573.3    AXCN02000647    JXUM01042371    KQ561321    KXJ78990.1    CH477307    EAT44081.1    AXCM01003646    GFDL01000844    JAV34201.1    LJIJ01001041    ODM93244.1    GEZM01034099    GEZM01034098    GEZM01034097    GEZM01034096    GEZM01034095    JAV83932.1    GFDF01005018    JAV09066.1    GFDF01005017    JAV09067.1    GDIQ01124152    GDIP01047524    JAL27574.1    JAM56191.1    GDIP01153761    JAJ69641.1    UFQS01000114    UFQT01000114    SSW99847.1    SSX20227.1    GDIP01163053    JAJ60349.1    GDIP01154558    JAJ68844.1    GDIP01027971    JAM75744.1    AJWK01008174    GDIQ01121753    JAL29973.1    GDIP01138759    JAL64955.1    GDIQ01261758    JAJ89966.1    GDIQ01203866    JAK47859.1    GDIQ01017384    JAN77353.1    APGK01039879    BT128010    KB740975    KB632186    AEE62972.1    ENN76447.1    ERL89732.1    KQ971362    EFA08902.1    GDIQ01135253    JAL16473.1    KK853039    KDR12187.1    GL732525    EFX88789.1    GDIQ01103159    JAL48567.1    GDIP01171554    JAJ51848.1    GDIQ01121752    JAL29974.1    CCAG010023391    GAKP01004904    JAC54048.1    GAMC01008961    JAB97594.1    AAZX01009238    GBXI01009454    JAD04838.1    GDHF01014576    JAI37738.1    JXJN01012270    NNAY01000460    OXU28223.1    GFXV01001417    MBW13222.1    CM000157    EDW88815.1    KRJ98041.1    KQ434823    KZC07329.1    MWRG01009701    PRD26948.1    CH954177    KQS70433.1    EDV58530.1    GDAI01000573    JAI17030.1    CH902620    EDV32332.1    CH480818    EDW52425.1    CM000361    CM002910    EDX04527.1    KMY89516.1    GGMS01014083    MBY83286.1    KK107148    EZA57473.1    ABLF02034187    AK341580    BAH71939.1    AE014134    AGB92874.1    AY075413    OUUW01000006    SPP81618.1    KK857328    PTY27046.1    GGMR01001280    MBY13899.1    KK118034    KFM72035.1    GBBI01003293    JAC15419.1    GEFM01004871    JAP70925.1   

Proteomes

UP000053268    UP000218220    UP000053240    UP000007151    UP000283053    UP000037510    + More
UP000000673    UP000030765    UP000069272    UP000075881    UP000075920    UP000075885    UP000075884    UP000075840    UP000075882    UP000075903    UP000075902    UP000007062    UP000076408    UP000075880    UP000075886    UP000069940    UP000249989    UP000008820    UP000075900    UP000075883    UP000192223    UP000094527    UP000092461    UP000019118    UP000030742    UP000007266    UP000027135    UP000000305    UP000078200    UP000092445    UP000092444    UP000095300    UP000002358    UP000091820    UP000095301    UP000092460    UP000215335    UP000092443    UP000002282    UP000076502    UP000008711    UP000007801    UP000001292    UP000192221    UP000000304    UP000053097    UP000007819    UP000000803    UP000268350    UP000054359   

PRIDE

M9PCL5    Q9VKX4   

Pfam

PF00177   Ribosomal_S7

Interpro

IPR023798   Ribosomal_S7_dom        + More
IPR020606   Ribosomal_S7_CS       
IPR000235   Ribosomal_S5/S7       
IPR036823   Ribosomal_S7_dom_sf       

SUPFAM

SSF47973   SSF47973       

Gene 3D

1.10.455.10    

ProteinModelPortal

A0A194QH41   A0A2A4JLG8   A0A2H1VLV9   A0A194QX77   A0A212EZS2   A0A3S2NPH7   + More
A0A0L7LET9   W5JC13   A0A2M4AKT6   A0A2M4AKM8   A0A2M4BYP8   A0A2M4BZ98   A0A2M3Z642   T1E8K1   A0A084VNJ9   A0A2M3Z6D5   A0A182F2P5   A0A182JVL6   A0A182VTS5   A0A182PAS4   A0A182NB19   A0A182ICN8   A0A182L605   A0A182UY27   A0A182TYR3   Q7Q1V7   A0A182Y8E6   A0A182J9Z1   A0A182QND8   A0A182G4H5   Q17CL6   A0A182RCC5   A0A182MM93   A0A1Q3G340   A0A1W4WTZ3   A0A1W4WV03   A0A1D2MK97   A0A1Y1MDR2   A0A1L8DRH5   A0A1L8DRR3   A0A0P6A454   A0A0N8AF22   A0A336LV60   A0A0P5D056   A0A0P5DLA0   A0A0P6AKQ2   A0A1B0CDR6   A0A0P5RDJ2   A0A0N8CET6   A0A0P5GLS4   A0A0P5JC87   A0A0P6I473   J3JXP0   D6WXT5   A0A0P5PFM8   A0A067QQP8   E9FUU9   A0A0P5RCY8   A0A0P5CGM8   A0A0P5Q5J0   A0A1A9UT77   A0A1A9ZVP1   A0A1B0FQ04   A0A1I8PHX7   A0A034WJU4   W8C5N5   K7J4T6   A0A1A9WLB4   A0A0A1X2H2   A0A0K8VFX8   A0A1I8MXK9   A0A1B0BD32   A0A232FCL2   A0A1A9Y6Y2   A0A2H8THN6   B4NZN1   A0A0R1DSK1   A0A154P5Y3   A0A2P6KKT7   A0A0Q5WAA7   B3N9N5   A0A0K8TSX1   B3MJG4   B4HWN0   A0A1W4UU57   B4Q985   A0A2S2QZW4   A0A026WNC3   C4WVL9   M9PCL5   Q9VKX4   A0A3B0KD93   A0A2R7X5J0   A0A2S2N9T4   A0A087U3U6   A0A023F2Z9   A0A131XXH9  

PDB

6GAZ     E-value=2.29785e-41,     Score=422

KEGG

101739965    K02992 small subunit ribosomal protein S7 | (RefSeq) 28S ribosomal protein S7, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003723   GO:0006412   GO:0003735   GO:0016021   GO:0005763   GO:0000028   GO:0019843   GO:0003729   GO:0032543  

PANTHER

PTHR11205  

Subcellular location

Mitochondrion  

Length:

237

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03555

outside

1  -  237

 

 

Pi

255.744043

Theta

170.53251

Tajima's D

1.881359

CLR

0.617635

CSRT

0.864106794660267

Interpretation

Uncertain