Gene

KWMTBOMO10323

Pre Gene Modal

BGIBMGA007217

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_A_member_1-like_[Bombyx_mori]

Location

Bomo_Chr17(-):7612952-7646272      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.584

CDS

ATGATAATCGCAGGCCTGAACACAACAAGAATGTCAATAGCCTATTCACCGACTAGTCCCGAACTTGAAGACGTTGTGCGAAGTAGCGTCGCTAATCTGTTGCTTTTAAATATTAAGCATATAATAAATGATACAGAAACAATCATGCCAGAAGTAGAGCTACCGCCCGACATAAATTGGAATGATAGTGCTATTTATGAAATTATCAAACGCATCTTGAGAGTAGATGCATATGATAATAGTAACGCTTTAAGGGGTATATACGCTCTTGAAGAAATAACACGTGAAGTTGTACTGGCTGTGGAATTTAATGATTCGCTCCTTGGGGCAACGGAGTTGTCAAATAACTTATCATTTGCATTGAGATTTCCCGAGAGGCCTAGGTTAAACTCATTTTACGCACAAGGTGGTCGCTCTTGGAGAACAGATGATGTATTTCCTGTATTTGAAAATCCAGGACCGAGATTTCCTTTGTCGTGGGAAGGTGGCAATGACCCAGGATACGTAAATGAAATGTTTATAGCATTTCAAAGCTGTATTTCGGCGGAACTTGTATCTAGATTAACGGGGAAGCCGGAATTAAAATCGTTTTCTGTGAACATACAAAGATACCCGCACCCGCCCTATGTGGACGATTTAGCAGTAGAAGCATTGCAAATGATTTTTCCGATGTTCATATTGTTGAGTTTTAGTTATTCAGCCGTGAATTTAGTAAGAGCAGTTACTTTAGAAAAGGAATTGCAGTTAAAGGAAACGATGAAAATAATGGGAATATCCACGTGGCTCCATTGGACCGCATGGTTCTTCAAGCAATTTATTTATTTAATGATAAGTGCAATCCTTATCATTGTCCTCTTAAAGGTTAGTTGGTTTACAAATGCGGACGGATTCAGCGGATACGCGGTCTTCACGAACACTCCTTGGACCGTTTTGCTTTTTTTTCTAGCGCTTTACCTGATTTGTTCAATCTTTTTTTGTTTTATGATCAGCGGCTTCTTTTCTAAAGGTAGTACATCAGCATTGTTCGGAGGCGTTATTTGGGTACTGGTGTATATCCCAGCATTACTGCTTTCAATGGATAACAATATGTCCATTGTAACACAGGTCATCACCTGCCTCAGTGTAAACTGCGCCATGTCTTACGGCTTTCAGTTATTGTTCGGAAAAGAGAGTATTGGTGGTATGCAATGGGGAGATTTTATGGCATCACCATCATCGGACTCTTCGCGATTCGTTTTTGGGCATGTAATTCTGATGCTGGTATTTGATTCCGTGCTGTATATGTTAATAGCCCTGTATTTAGAGCAAGTCTTGCCTGGACCCTTCGGTTTACCAAAGCCATGGTATTTTCCTATACAAAAGAGCTTTTGGTTTCCTAACAACGAAGAATCTAAAAATGGCATTATAATTGAACACGCAATTTCTAATGACGATGTTATTTTGGAAAAGGATCCGGAAAATCTCACAGTTGGTGTTAGAATGAATAATTTAACTAAAATATTTGGCGCAAACGTAGCAGTGAACCAATTGACTTTGAACATTTTTGATAACCAAATAACTGTATTACTTGGTCACAACGGTGCCGGTAAATCAACAACCATGTCTATGCTAACAGGAAACATGAAAGCTACCCGTGGCTCAGTAACATTAGCGGGCTATGATATTCAAACACAAGTTAAAGCGGCTAGAGCTCATCTCGGCTTTTGCCCGCAACACAATGTACTTTTCAACGATTTAACTGTCAAAGAACATTTGGAATTCTTCGCCAGACTTAAAGGATTTTCGGGAAAAGAACTTTATCAAGAGATAGATTCTTTAATTGAAAAGTTAGAACTTCAAGAAAAGCAAAACTACGTCGCTAATGGATTATCAGGTGGTCAGAAACGTAGATTATGCGTTGGAATAGCCCTGAGTGGTGCCGCTAGCGTGGTATTGCTGGATGAGCCTACATCGGGAATGGATCCGGCTTCAAGACGAGCCCTGTGGGACTTATTGCAAAGAGAGAAACGAGGGCGCTCTATTATCTTAACAACTCATTTCATGGACGAGGCTGATGTTCTCGGTGACCGAGTGGCGATTATGGCTAATGGTCGTCTCCAGTGCGTTGGGACACCATATTTTTTGAAACGCCATTACGGAGTTGGTTACACATTAGTCGTTGTCAAAAAGGAAGGTTTCGACTACACGGCGTGCACCGATCTAATCAATAAATATATACCCGGGATTGCAATTAAAGAAGATCGCGGACCAGAAATAAATTACTCCTTAACAAACATCCAGTCTCATGTATTTGAAGATATGCTTAACGATTTCGAAAAGAATGTTAACAATATTAAATTCAAAGACTATGGCTTGATAGCAACTACTTTAGAAGATGTATTCATGTCAGTGGGTTCTGATGTGGCAACAATAAACTCTGTCAGCGACGATGGAGCTGCAAGTCTTGATCTATCAGGCGATGATAATCTAAAAAATGAATTTTCATCTTTGGAACAATTGACGAAAGAAGGTAAAGTGTCAGGAGCAAGTCTGGTCGGAAAGCACGTGTTAGCAGTTTGGATGAAACTGTTTTTGGTCTGGTTTCGTTCTTGGTGGATGGTACTCCTCCAGTTGGCTGTTCCAATAGTTATGATGAATGCGACGCTGCTGATCGTACAGTTCCTCATTTCGTTCGTTGCCAATATCCAAATAAGGCATTTGTCACTCGAATATGGGTATTCGAGGACCGAGACATTGTTATCATTCAACGGAAGTTCAAGTTCATCCATTGGTGCGTTGGCAAGCAACGCTTACGAAAATATTTTTAAGTCATCTGGCATAGATACCATGGAAATAACAATCGTAGAAGATCAGTCAATCGACGAGTATTATTTAGAAAGGGCATCAGATCCAATTGAAATGGGTGCACTGCGACACAGTGTCCTGACAGGCGCTACATTTTCTGACGACGTCGCGACCGCGTGGTTCAGCAACTTCGCCTACCATGATGTGGCGACTTCATTGGCTTCTGTTTATTCAGCGCTACTTCGAGCCTTCAACTCCACAGCCGAGATCAATGTGTACAATCACCCTATAGAAGCCACATATAAAAATCAAAACGACATGCAACTGTTGGTCACCATGATATCGATGCAGCTCTCCTCCGGCGTGGCCAGCTGTATCGCCATCGTCAGCGCCGTCTTCGTCATGTTTTATATTAAGGAACGTGCGTGTGGTGCTAAGTTACTACAAAAGGCGGCTGGCATCCAGCCCGCTGTACTTTGGGGGAGCGCAGCGGTCTTTGACTGGCTCTTGTTCAGTATTATCTGCATTACCATTGTAATTACATGTGCTGCGTTCGAGGTACAGGGACTATCTACTTTTGTAGAATTGGGACGAATGTACCTTTGCCTGATTGTGTACGGCGCGGCGATGCTACCACTCAACTATCTACTGTCGCATTTATTCGAAGGGCCAGCTTTAGGTTTTGTCGTCATATTCTTCACGAATTGTTTGTTGGGTATGATGGGGCCACAAATAGTTGAGGCTTTGTCGTCTCCGCAACTCAACACTCAAAACGTAGCGGACATACTCGATACGATATTTCAATTTTTCCCGCTCTACAGCCTTGTGACATGTGTCAGGGAATTGAACCAGATAGGTCTGGTGGAGTACTCGTGTATGCGTGGATGCGAGTACATTTCAGTGTTGTTGCCAGACCTCAAGGAATGCACAATGGCGGTCATGTGTGAACATTACTTGGAGTCTTGCTGTGTTCGTGAAAGTCCTTATTTCGAATGGGAAAAACCAGGCGTCCTTCGATATCTGGTCGTGATGTTGGCTACCTGCGGTGTTTTGTGGTTGATCCTTATGACTATCGAGTATCGTTTGTTCCAAAAGGTCTTCATGTTCAGAAAAATACCGCCTCCGATACCGGAGAATACGCTCGATAAGGACGTGGCTGACGAGGCGGAGCATGTCCGGCAGATCAGCAAGCCAGATCTGGCGCGGCACGGACTCGTCGCGAAGAACCTCTCCAAATATTACGGATCGAATCTCGCAGTCGACCAAGTATCTTTCACTGTTAGCGACTCTGAATGTTTCGGTCTGCTCGGAGTGAACGGTGCCGGGAAAACGACCACATTTAAAATGTTGATGGGCGACGAGAACATCTCCAGCGGCGAAGCGTTCGTCAGCGGGTACTCCGTCCAGCAGCGGCTGACTAAAGTGCACAAGAATATCGGCTACTGTCCTCAGTTCGACGCTTTGTTCGGGGAGCTGACTGGGCGCGAAACGCTGCGCCTGTTCTCATTGTTGCGCGGCCTTCGGAACTTCAGCGGCGCGCACGCGGACATCCTCGCGCACTCCCTCGGCTTCCTTAAGCATTTAGATAAAAGAGTGGATCAGTATTCTGGTGGAACAAAAAGGAAGTTAAACACAGCAATAGCTTTCCTAGGAACAACTCGTTTAATTTTCGTTGATGAACCGACAACGGGCGTAGATCCCGCTGCCAAACGACACGTTTGGCGGGCGATGCGCGGCGTGCAGCGCACGGGGCGCGGGGTGGTGCTGACGTCACACAGCATGGAGGAGTGCGAGGCGTTGTGTTCGCGCCTCACGATAATGGTCAACGGCCGGTTCCAGTGTCTCGGCTCACCGCAGCATCTCAAAAACAAATTTTCTCAAGGATTCACTTTGATCATCAAACTGAAGTCAAATGAGGAGACAAATCCGTCATCCAGCAGAAACCAAGAAGAAGCTATTAAAAGTTACGTCACCGCCAATTTCGTCAACCCTAAGATGATGGAGGAGCATCAGGGTCTGATAACATACTATTTGCCGGATCAGACTGTGCCGTGGTCGAAGATGTTCGGTATAATGGAACGAGCGAAACAATCCCTCGACGTTGAAGATTACAGCATCTCTCAGACGACCCTAGAGCAGATATTCTTGCAGTTTACGAAATATCAAAGGGAAGGCTTGTGA

Protein

MIIAGLNTTRMSIAYSPTSPELEDVVRSSVANLLLLNIKHIINDTETIMPEVELPPDINWNDSAIYEIIKRILRVDAYDNSNALRGIYALEEITREVVLAVEFNDSLLGATELSNNLSFALRFPERPRLNSFYAQGGRSWRTDDVFPVFENPGPRFPLSWEGGNDPGYVNEMFIAFQSCISAELVSRLTGKPELKSFSVNIQRYPHPPYVDDLAVEALQMIFPMFILLSFSYSAVNLVRAVTLEKELQLKETMKIMGISTWLHWTAWFFKQFIYLMISAILIIVLLKVSWFTNADGFSGYAVFTNTPWTVLLFFLALYLICSIFFCFMISGFFSKGSTSALFGGVIWVLVYIPALLLSMDNNMSIVTQVITCLSVNCAMSYGFQLLFGKESIGGMQWGDFMASPSSDSSRFVFGHVILMLVFDSVLYMLIALYLEQVLPGPFGLPKPWYFPIQKSFWFPNNEESKNGIIIEHAISNDDVILEKDPENLTVGVRMNNLTKIFGANVAVNQLTLNIFDNQITVLLGHNGAGKSTTMSMLTGNMKATRGSVTLAGYDIQTQVKAARAHLGFCPQHNVLFNDLTVKEHLEFFARLKGFSGKELYQEIDSLIEKLELQEKQNYVANGLSGGQKRRLCVGIALSGAASVVLLDEPTSGMDPASRRALWDLLQREKRGRSIILTTHFMDEADVLGDRVAIMANGRLQCVGTPYFLKRHYGVGYTLVVVKKEGFDYTACTDLINKYIPGIAIKEDRGPEINYSLTNIQSHVFEDMLNDFEKNVNNIKFKDYGLIATTLEDVFMSVGSDVATINSVSDDGAASLDLSGDDNLKNEFSSLEQLTKEGKVSGASLVGKHVLAVWMKLFLVWFRSWWMVLLQLAVPIVMMNATLLIVQFLISFVANIQIRHLSLEYGYSRTETLLSFNGSSSSSIGALASNAYENIFKSSGIDTMEITIVEDQSIDEYYLERASDPIEMGALRHSVLTGATFSDDVATAWFSNFAYHDVATSLASVYSALLRAFNSTAEINVYNHPIEATYKNQNDMQLLVTMISMQLSSGVASCIAIVSAVFVMFYIKERACGAKLLQKAAGIQPAVLWGSAAVFDWLLFSIICITIVITCAAFEVQGLSTFVELGRMYLCLIVYGAAMLPLNYLLSHLFEGPALGFVVIFFTNCLLGMMGPQIVEALSSPQLNTQNVADILDTIFQFFPLYSLVTCVRELNQIGLVEYSCMRGCEYISVLLPDLKECTMAVMCEHYLESCCVRESPYFEWEKPGVLRYLVVMLATCGVLWLILMTIEYRLFQKVFMFRKIPPPIPENTLDKDVADEAEHVRQISKPDLARHGLVAKNLSKYYGSNLAVDQVSFTVSDSECFGLLGVNGAGKTTTFKMLMGDENISSGEAFVSGYSVQQRLTKVHKNIGYCPQFDALFGELTGRETLRLFSLLRGLRNFSGAHADILAHSLGFLKHLDKRVDQYSGGTKRKLNTAIAFLGTTRLIFVDEPTTGVDPAAKRHVWRAMRGVQRTGRGVVLTSHSMEECEALCSRLTIMVNGRFQCLGSPQHLKNKFSQGFTLIIKLKSNEETNPSSSRNQEEAIKSYVTANFVNPKMMEEHQGLITYYLPDQTVPWSKMFGIMERAKQSLDVEDYSISQTTLEQIFLQFTKYQREGL

Uniprot

A0A0S0ARF5   A0A2A4JM10   A0A0S0AQJ2   A0A0S0ERW2   A0A0S0G7V0   A0A385KNT6   + More
A0A194QBC5   A0A0S0AFB2   A0A212EZX9   A0A194QS80   A0A0R9Y563   A0A2H1WL33   A0A194QB45   A0A0S0AHC2   A0A0S0FVT4   A0A0S0AE03   A0A0S0AGL9   A0A084WM40   A0A182IUJ1   B0WSD3   A0A1Y1M5R0   A0A182H6X5   A0A1Y1M0P3   A0A0A1WS91   A0A0A1X7V3   A0A182MXD0   A0A182FVA3   A0A182UD52   A0A182FEF7   A0A182Q5G1   W5JEQ8   W8AEW5   V5I8B4   B3N0H0   A0A0P8ZSC3   A0A0R1ECJ8   A0A0R1EK92   M9PHQ1   B4I6F9   Q9VRG4   W5JDA5   Q16YY8   B4PZ21   M9PFD0   A0A0K8U924   B3NYC5   A0A182USP4   A0A0Q5T5N3   A0A182WD85   B0WSD2   A0A1I8JTI1   A0A182MLU1   A0A1I8JUE5   T1PG14   A0A1I8N5J8   A0A1I8N5J5   A0A1Y9HEK0   A0A182YC52   A0A1Y9HEA5   A0A182YLU8   A0A182P1K7   Q7PZY9   A0A336MK43   A0A336MFM8   A0A182NIG1   A0A182X014   A0A0M4EU41   A0A182JZ80   A0A1W4VVK7   A0A1W4VWB7   A0A1W4VJ25   A0A182QCE6   A0A1I8JTJ7   A0A182WCA7   A0A182KT37   A0A182U373   A0A182GIU7   A0A1I8Q220   Q5TN17   A0A182J4R4   B0WSD4   A0A182JDW2   A0A1W4X3J8   A0A182VBD0   A0A1L8DYC1   A0A1A9X391   A0A2K6VB28   A0A1Y9GL18   A0A084WM41   Q29I60   A0A0R3NZK8   A0A0R3NZG0   A0A182GWA1   A0A182WTT6   Q16YY9   W4VRM5   Q16YY7   Q16LB4   A0A182LL72  

Pubmed

26583651    30202031    26354079    22118469    24438588    28004739    + More
26483478    25830018    20920257    23761445    24495485    17994087    18057021    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17510324    25315136    25244985    12364791    14747013    17210077    20966253    15632085    23185243   

EMBL

KP219767    ALE60402.1    NWSH01001098    PCG72614.1    KP219765    ALE60400.1    + More
KP259912    ALF46273.1    KP259911    ALF46272.1    MG637361    AXZ96960.1    KQ459232    KPJ02762.1    KP219770    ALE60405.1    AGBW02011226    OWR47004.1    KQ461155    KPJ08174.1    KP219763    ALE60398.1    ODYU01009394    SOQ53790.1    KPJ02763.1    KP219764    ALE60399.1    KP259910    ALF46271.1    KP219766    ALE60401.1    KP219762    ALE60397.1    ATLV01024373    ATLV01024374    ATLV01024375    KE525351    KFB51284.1    DS232069    EDS33778.1    GEZM01043992    JAV78597.1    JXUM01115098    KQ565848    KXJ70600.1    GEZM01043991    JAV78598.1    GBXI01012776    GBXI01008150    JAD01516.1    JAD06142.1    GBXI01007301    GBXI01005702    JAD06991.1    JAD08590.1    AXCN02001694    ADMH02001720    ETN61309.1    GAMC01019799    GAMC01019797    GAMC01019795    JAB86760.1    GALX01004980    JAB63486.1    CH902640    EDV38374.2    KPU77383.1    KPU77384.1    CM000162    KRK07097.1    KRK07095.1    KRK07096.1    AE014298    AGB95603.1    CH480823    EDW56365.1    AAF50837.2    ADMH02001563    ETN62056.1    CH477506    EAT39838.1    EDX03082.2    KRK07098.1    AGB95602.1    GDHF01029484    GDHF01021855    GDHF01018869    GDHF01001688    JAI22830.1    JAI30459.1    JAI33445.1    JAI50626.1    CH954180    EDV47604.2    KQS30569.1    EDS33777.1    APCN01003267    AXCM01001782    KA647614    AFP62243.1    AAAB01008986    EAA00188.4    UFQT01001165    SSX29213.1    SSX29212.1    CP012528    ALC48535.1    AXCN02000888    JXUM01066793    KQ562416    KXJ75968.1    EAL38745.3    EDS33779.1    GFDF01002617    JAV11467.1    APCN01005871    KFB51285.1    CH379063    EAL32793.3    KRT06330.1    KRT06331.1    KRT06332.1    KRT06329.1    JXUM01020746    KQ560580    KXJ81818.1    EAT39837.1    GANO01001240    JAB58631.1    EAT39839.1    CH477911    EAT35115.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000030765    UP000075880    + More
UP000002320    UP000069940    UP000249989    UP000075884    UP000069272    UP000075902    UP000075886    UP000000673    UP000007801    UP000002282    UP000000803    UP000001292    UP000008820    UP000008711    UP000075903    UP000075920    UP000075840    UP000075883    UP000075900    UP000095301    UP000076408    UP000075885    UP000007062    UP000076407    UP000092553    UP000075881    UP000192221    UP000075882    UP000095300    UP000192223    UP000091820    UP000001819   

PRIDE

M9PHQ1    Q9VRG4    M9PFD0   

Pfam

PF00005   ABC_tran

Interpro

IPR003593   AAA+_ATPase        + More
IPR026082   ABCA       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR027417   P-loop_NTPase       
IPR036259   MFS_trans_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF103473   SSF103473       

ProteinModelPortal

A0A0S0ARF5   A0A2A4JM10   A0A0S0AQJ2   A0A0S0ERW2   A0A0S0G7V0   A0A385KNT6   + More
A0A194QBC5   A0A0S0AFB2   A0A212EZX9   A0A194QS80   A0A0R9Y563   A0A2H1WL33   A0A194QB45   A0A0S0AHC2   A0A0S0FVT4   A0A0S0AE03   A0A0S0AGL9   A0A084WM40   A0A182IUJ1   B0WSD3   A0A1Y1M5R0   A0A182H6X5   A0A1Y1M0P3   A0A0A1WS91   A0A0A1X7V3   A0A182MXD0   A0A182FVA3   A0A182UD52   A0A182FEF7   A0A182Q5G1   W5JEQ8   W8AEW5   V5I8B4   B3N0H0   A0A0P8ZSC3   A0A0R1ECJ8   A0A0R1EK92   M9PHQ1   B4I6F9   Q9VRG4   W5JDA5   Q16YY8   B4PZ21   M9PFD0   A0A0K8U924   B3NYC5   A0A182USP4   A0A0Q5T5N3   A0A182WD85   B0WSD2   A0A1I8JTI1   A0A182MLU1   A0A1I8JUE5   T1PG14   A0A1I8N5J8   A0A1I8N5J5   A0A1Y9HEK0   A0A182YC52   A0A1Y9HEA5   A0A182YLU8   A0A182P1K7   Q7PZY9   A0A336MK43   A0A336MFM8   A0A182NIG1   A0A182X014   A0A0M4EU41   A0A182JZ80   A0A1W4VVK7   A0A1W4VWB7   A0A1W4VJ25   A0A182QCE6   A0A1I8JTJ7   A0A182WCA7   A0A182KT37   A0A182U373   A0A182GIU7   A0A1I8Q220   Q5TN17   A0A182J4R4   B0WSD4   A0A182JDW2   A0A1W4X3J8   A0A182VBD0   A0A1L8DYC1   A0A1A9X391   A0A2K6VB28   A0A1Y9GL18   A0A084WM41   Q29I60   A0A0R3NZK8   A0A0R3NZG0   A0A182GWA1   A0A182WTT6   Q16YY9   W4VRM5   Q16YY7   Q16LB4   A0A182LL72  

PDB

5XJY     E-value=1.56651e-125,     Score=1156

KEGG

101740368    K05643 ATP-binding cassette, subfamily A (ABC1), member 3 | (RefSeq) ATP-binding cassette sub-family

PATHWAY

02010    ABC transporters - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0042626   GO:0005524   GO:0043231   GO:0005319   GO:0006869   GO:0016887   GO:0006468   GO:0015935   GO:0004812   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

PANTHER

PTHR19229  

Length:

1654

Number of predicted TMHs:

14

Exp number of AAs in TMHs:

283.191789999999

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.06991

outside

1  -  220

TMhelix

221  -  243

inside

244  -  263

TMhelix

264  -  286

outside

287  -  305

TMhelix

306  -  328

inside

329  -  332

TMhelix

333  -  355

outside

356  -  364

TMhelix

365  -  387

inside

388  -  410

TMhelix

411  -  433

outside

434  -  838

TMhelix

839  -  861

inside

862  -  867

TMhelix

868  -  890

outside

891  -  1043

TMhelix

1044  -  1066

inside

1067  -  1086

TMhelix

1087  -  1109

outside

1110  -  1123

TMhelix

1124  -  1146

inside

1147  -  1152

TMhelix

1153  -  1175

outside

1176  -  1189

TMhelix

1190  -  1207

inside

1208  -  1263

TMhelix

1264  -  1286

outside

1287  -  1654

 

 

Pi

221.666616

Theta

167.970117

Tajima's D

0.970414

CLR

0.24424

CSRT

0.655117244137793

Interpretation

Uncertain