SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10316
Pre Gene Modal
BGIBMGA007307
Annotation
PREDICTED:_ATP_synthase_subunit_O?_mitochondrial-like_[Amyelois_transitella]
Full name
ATP synthase subunit O, mitochondrial      
Alternative Name
Oligomycin sensitivity conferral protein
Location in the cell
Cytoplasmic   Reliability : 1.91 Mitochondrial   Reliability : 1.533
 

Sequence

CDS
ATGTCCTGCATTTTTAGAAGATTCATGTGTACCGTTGGACTCGCTAAAAAGCCGCCAATACCAGTATTTGGTGTTGAAGGGCGGTATGTATCAGCACTCTATAGTGCGGCTGCACAAAAAAATCAATTGGATGACGTTGAAAAACATTTGCAAATTTTGAATAAAGAACTTTTGAAACCAAAAATGATTGATTTCATCGAAACCTGTGTAATTAATTCTGCAGCGAAGGCAAAGATGTTGAAACAGGTTGCAAATGAAGCTGGAATGCCAGACACCGCCATAAACTTTCTAGAGCTTGTAGCTGAAAATGGACGTTTAAAGCTTTTGAGAAAAATGATCAACAAGTTTCTTGCTGTTATGGTAGCGCACAGAAATGAGGCATTATGTGAAGTAATAACTGCACAACCACTTGATGATAGTACCAGAAAAATCCTTATGGATGCCCTTAAAAAGTTCGTAAAGGAAGGCAAGAATATACAATTGACAGAGAAAGTGGATCCATCTATTATGGGAGGCATGATCGTGGGAATTGAAGATAAACACATAGACATGAGTATAGCGAGAAAAATTCAAATGTACACTGATATTCTGAAACAGTCTGTTTAA
Protein
MSCIFRRFMCTVGLAKKPPIPVFGVEGRYVSALYSAAAQKNQLDDVEKHLQILNKELLKPKMIDFIETCVINSAAKAKMLKQVANEAGMPDTAINFLELVAENGRLKLLRKMINKFLAVMVAHRNEALCEVITAQPLDDSTRKILMDALKKFVKEGKNIQLTEKVDPSIMGGMIVGIEDKHIDMSIARKIQMYTDILKQSV

Summary

Subunit
F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.
Similarity
Belongs to the ATPase delta chain family.
Belongs to the nucleosome assembly protein (NAP) family.
Keywords
ATP synthesis   Complete proteome   Hydrogen ion transport   Ion transport   Membrane   Mitochondrion   Mitochondrion inner membrane   Reference proteome   Transit peptide   Transport  
Feature
chain  ATP synthase subunit O, mitochondrial
EMBL
JTDY01000299    KOB77814.1    RSAL01000006    RVE54208.1    AGBW02011646    OWR46345.1    + More
NWSH01002273    PCG68723.1    ODYU01009676    SOQ54271.1    GDAI01001381    JAI16222.1    GFDF01001758    JAV12326.1    EZ422712    ADD18988.1    KK852498    KDR22637.1    NWSH01002449    PCG68285.1    JRES01000819    KNC28149.1    AJVK01012376    GFDG01001586    JAV17213.1    GFDG01001585    JAV17214.1    GFDG01001584    JAV17215.1    KC632370    AGM32184.1    CP012526    ALC47729.1    ODYU01002594    SOQ40301.1    AJWK01003163    NEVH01013205    PNF29813.1    KK857664    PTY27392.1    AGBW02008253    OWR53927.1    X99666    AE014297    AY058261    CH964272    EDW83783.1    CH916369    EDV92594.1    MG992387    AXY94825.1    CH902629    EDV35311.1    CM000160    EDW97485.1    CH480815    EDW42085.1    CH954181    EDV48980.1    HQ649759    ADV36665.1    DQ443279    ABF51368.1    GBYB01012968    JAG82735.1    AXCM01000623    UFQT01000197    SSX21570.1    GAKP01007890    JAC51062.1    GANO01002480    JAB57391.1    GAMD01003144    JAA98446.1    GAMD01003124    JAA98466.1    KQ971312    EEZ99200.1    AAAB01008888    EAA08884.3    APCN01005541    GGFL01004443    MBW68621.1    GGFM01001195    MBW21946.1    GGFK01002309    MBW35630.1    GGFJ01009353    MBW58494.1    CH477695    EAT37155.1    GL435171    EFN73906.1    GAPW01004357    JAC09241.1    GL762897    EFZ20576.1    LC058926    LC058927    LC058928    LC058929    LC058930    LC058931    LC058932    LC058933    LC058934    LC058935    LC058936    LC058937    LC058938    LC058939    LC058940    LC058941    BAR89771.1    BAR89772.1    BAR89773.1    BAR89774.1    BAR89775.1    BAR89776.1    BAR89777.1    BAR89778.1    BAR89779.1    BAR89780.1    BAR89781.1    BAR89782.1    BAR89783.1    BAR89784.1    BAR89785.1    BAR89786.1    LC058942    LC058943    LC058944    LC058945    LC058946    LC058947    LC058948    LC058949    LC058950    LC058951    LC058952    LC058953    LC058954    LC058955    LC058956    LC058957    BAR89787.1    BAR89788.1    BAR89789.1    BAR89790.1    BAR89791.1    BAR89792.1    BAR89793.1    BAR89794.1    BAR89795.1    BAR89796.1    BAR89797.1    BAR89798.1    BAR89799.1    BAR89800.1    BAR89801.1    BAR89802.1    PYGN01000667    PSN42534.1    GECU01001140    JAT06567.1    KQ459833    KPJ19788.1    LJIG01016274    KRT81093.1    JXUM01125166    GAPW01004358    KQ566915    JAC09240.1    KXJ69740.1    KA647464    AFP62093.1    AK417457    BAN20672.1    KQ981673    KYN38293.1    KQ978219    KYM96407.1    GDHF01022841    JAI29473.1    GL888932    EGI57261.1    GAMC01005046    JAC01510.1    OUUW01000008    SPP83931.1    GEZM01081401    JAV61650.1    GAIX01005955    JAA86605.1    GECZ01031467    JAS38302.1    AXCN02000015    ATLV01013150    KE524842    KFB37349.1    CH933806    EDW15166.1    DQ445511    GEBQ01032152    ABD98749.1    JAT07825.1    KX460823    AQW38585.1    KQ980581    KYN15347.1    KK107459    EZA50350.1    QOIP01000004    RLU23268.1    RSAL01000184    RVE44841.1    CH940650    EDW67221.1    GFWV01019374    MAA44102.1    CH479185    EDW38336.1    NNAY01002089    OXU22114.1    AK401766    KQ459601    BAM18388.1    KPI94045.1    CM000070    EAL29047.2   
Pfam
PF00213   OSCP        + More
PF15882   DUF4735
PF00956   NAP
Interpro
IPR000711   ATPase_OSCP/dsu        + More
IPR026015   ATP_synth_OSCP/delta_N_sf       
IPR031751   DUF4735       
IPR002164   NAP_family       
IPR037231   NAP-like_sf       
SUPFAM
SSF47928   SSF47928        + More
SSF143113   SSF143113       
Gene 3D
PDB
5FIL     E-value=9.43481e-31,     Score=329

Ontologies

Topology

Subcellular location
Mitochondrion  
Mitochondrion inner membrane  
Length:
201
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00465
Exp number, first 60 AAs:
0.00233
Total prob of N-in:
0.12197
outside
1  -  201
 
 

Population Genetic Test Statistics

Pi
196.04333
Theta
154.888928
Tajima's D
0.759056
CLR
0.116284
CSRT
0.591820408979551
Interpretation
Uncertain
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