SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10315
Pre Gene Modal
BGIBMGA007306
Annotation
UPF0764_protein_C16orf89-like_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.068 Nuclear   Reliability : 1.331
 

Sequence

CDS
ATGCAAGTGAAATATATCGCGTTGTTAACGATATTCACGTGCTCGCAAGCAATTTACCCATATTTCGATACGCAAGATTTTATATACAATGTTCCAAAAGTATACAGAATTTCAATTGTATTAGATAAACTATTAGATTATTATGAGAGAAAGCCTTCTAAAGATCCCGAGTGGTACATTGCTTTAGGAATGGCAAGAGGCCAATTAGAATATACTATTAATGAACTGGACAAAGCGGTTCCTGAAAAACTGAAAGAGAATTTAAAGAACATAACGCGAAGAATAGACCGCGTTCGAAAAAAAATTGATATGGGGAATTTGGTGTACCGAAGTAAGGATTACGAATATGTAGTGAAAGCAATTTTTGAAAACATGGATGTACTGTCGAGTGTTTTAGAACCGATCACACTAGGAACGATGGGTACACAAAAACCATACAGATTTACGTTCGAACAATACCTACAAGAAGCTCGTACGAAGATGCCCAGTAGAAAAGCTGCAGACGCTTGCACGATGCAACTACTAATTTCAGCTATGGAGACACAGACGACACAGTCGGACGGTGTTTGCGAGATGACGCCTGAATGTTCATCGCAGATAATCAAAGGTTCGGGACTTGCTTTTCAACAGACGAGTCGCGTCCGTGCGGCAGTTTTAGCTAGTCTATTTGATTGCATGGAAGGACTGGACGTACCGGCTCATATTTACAAACTGTGCATACAAATTTACAAGGAAACGAAATCTCTCGAAGTTTGGGATCATCCTCCCGGTACAAAGACATTATTTATGCAACAAATTTTGTATTGCGCATCACAAGGCTATGGTGAGTTTGTGAAGCCACGTTGGATGAATAAGATAATCGCGTGGCAGCAACCAAAAGGATGTTACGCTGATGATCGACAACCTTTCATGAGGCTCACCGGTTTCGTTGGCGCATCGACACCCGCAACTCTTAATGACAGAGAAGAAGAATATCGAGTGAAGAAAGCGGCTACATCCGAAGGTGGCGCCTGTAACTCGTTGACGTCAGCAATGGCTCTTGGTTCATTAGTGTTGCATATAAGAACACTACTCGAGACAGATCAAGCATTTCAATACGACGTGCTTCTTTGA
Protein
MQVKYIALLTIFTCSQAIYPYFDTQDFIYNVPKVYRISIVLDKLLDYYERKPSKDPEWYIALGMARGQLEYTINELDKAVPEKLKENLKNITRRIDRVRKKIDMGNLVYRSKDYEYVVKAIFENMDVLSSVLEPITLGTMGTQKPYRFTFEQYLQEARTKMPSRKAADACTMQLLISAMETQTTQSDGVCEMTPECSSQIIKGSGLAFQQTSRVRAAVLASLFDCMEGLDVPAHIYKLCIQIYKETKSLEVWDHPPGTKTLFMQQILYCASQGYGEFVKPRWMNKIIAWQQPKGCYADDRQPFMRLTGFVGASTPATLNDREEEYRVKKAATSEGGACNSLTSAMALGSLVLHIRTLLETDQAFQYDVLL

Summary

Pfam
PF15882   DUF4735        + More
PF00213   OSCP
Interpro
IPR031751   DUF4735        + More
IPR000711   ATPase_OSCP/dsu       
IPR026015   ATP_synth_OSCP/delta_N_sf       
SUPFAM
SSF47928   SSF47928       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.937015
 
 
Length:
370
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.37203
Exp number, first 60 AAs:
3.14934
Total prob of N-in:
0.18268
outside
1  -  370
 
 

Population Genetic Test Statistics

Pi
253.301467
Theta
188.894018
Tajima's D
1.048306
CLR
0.004388
CSRT
0.677466126693665
Interpretation
Uncertain
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