SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10313  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007256
Annotation
protein_yellow-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.54
 

Sequence

CDS
ATGAAAGTAATAATATGTTTTATTGCTGCATGGATGATCAGCTATGCTAGTACTCAATCGCCTAATGGATCCACAATAGGTACTCTTTATCGATGGAAACAAATAGATTATCAATATCCTTCTCCAGCTCAGAGACAGGAAGCTATTGATGCGGGTGAATTTATTCAAGCCAATGTGATACCTTTGGGCATTGAGCGTTGGAAAGGACGAGTATTTATAAGCACCCCACGATGGAAAAGCGGGGTACCAGCAACACTATCAAGTGTACCAGTATCATCACAATCAGAATCACCAGAACTAGCCCCATATCCCAATTGGGACTGGCACAATGCAGTAAATTGTACTGGATTTACCTCGATTTTCCGTATGAGCGTGGACCATTGCGGCATTATGTGGGTTTTAGACTCCGGTCAAGTCGAGGCTTTTGAAACACCGCGTCAATTATGCCCGCCGACATTATTTGCCATAGATCTAGAGACCGACACTGTAGTTGCAAAATATCCAATACCGAGTGAATTCGTTCTTCAAAATTCCTTAATCACAAACCTCATTGTAGACTCTCGTGATGCGCGGTGTAGAGATTTACATGTGTACATTGCAGACGCTTGGCGTTTTGGTTTAATTGTGTTCAGAGATTCAGACGCAGCTTTTTGGAGATTCAGCCACTACAGCTTTTACCCTGAGCCGTTACTTTCCAATTATACGTTACACGGGTTAAATTATCAATGGTCTGATGGATTGTTCGGTATGTCACTGGGCAAGTACCATTTAGGTGATCGCCCACTGTACTACCACTCGATGTCCGGCTCTCTTGAGTTCACAGTAGCAACATCTGTCATACGTGATCCATCTCGAGTTGATAATGCTGTAAGCGAATTTACACTTCTTGGCGAAAGTCGAGGAGGTGATGGTCAAGTATCAGCCGCAGCTGTCGACCGCAACGGTGTCATGTTCTTTAACCTCATTTCCAGAGATGCTATTGGTTGTTGGGACACTCGCAATCCTTATACTAATGATAATCTAGCTATAGTGGCACAAAACAATAGAACAATGATATTCCCTAACGATTTACGAATGGATCATGAGGTGCCTCAATTAGCTTGGGTAATAACGAACAGATTGCCATTTTATCAGTTTAATTTAATAGATCCACTTGATTACAATTATAGAGTTATATATTTCGACCCTGCGGAAGTCGTAGAAAAAACAGTATGCAAGCAATACATTTGA
Protein
MKVIICFIAAWMISYASTQSPNGSTIGTLYRWKQIDYQYPSPAQRQEAIDAGEFIQANVIPLGIERWKGRVFISTPRWKSGVPATLSSVPVSSQSESPELAPYPNWDWHNAVNCTGFTSIFRMSVDHCGIMWVLDSGQVEAFETPRQLCPPTLFAIDLETDTVVAKYPIPSEFVLQNSLITNLIVDSRDARCRDLHVYIADAWRFGLIVFRDSDAAFWRFSHYSFYPEPLLSNYTLHGLNYQWSDGLFGMSLGKYHLGDRPLYYHSMSGSLEFTVATSVIRDPSRVDNAVSEFTLLGESRGGDGQVSAAAVDRNGVMFFNLISRDAIGCWDTRNPYTNDNLAIVAQNNRTMIFPNDLRMDHEVPQLAWVITNRLPFYQFNLIDPLDYNYRVIYFDPAEVVEKTVCKQYI

Summary

EMBL
BABH01034714    JN977515    AFC87795.1    NWSH01002273    PCG68715.1    ODYU01005750    + More
SOQ46921.1    AGBW02012635    OWR44676.1    GU063840    ADX87359.1    GU063839    ADX87358.1    KQ459232    KPJ02790.1    AK401348    BAM17970.1    KQ461155    KPJ08147.1    GU128939    ADD60452.1    SOQ46922.1    GU063841    ADX87360.1    AK401347    BAM17969.1    PCG68725.1    RSAL01000006    RVE54207.1    JN977514    AFC87794.1    BABH01034717    KQ971357    EFA08575.1    GU111769    ACY71062.1    GEZM01059452    JAV71477.1    LJIG01002012    KRT84928.1    JTDY01007934    KOB64850.1    KY221852    ATB56350.1    KB631759    ERL85871.1    LBMM01000416    KMQ98416.1    APGK01058750    KB741291    ENN70589.1    KK852421    KDR24270.1    KK107242    EZA54560.1    DS235761    EEB16619.1    KQ981732    KYN36573.1    KQ980514    KYN15713.1    ADTU01005925    KZ288255    PBC30654.1    KQ435724    KOX78394.1    DQ257416    ABB81847.1    GL888345    EGI62347.1    GBYB01013758    JAG83525.1    KQ414806    KOC60610.1    GECZ01009459    JAS60310.1    GBYB01015075    JAG84842.1    GL450410    EFN80989.1    GECZ01022497    JAS47272.1    GL443604    EFN61807.1    KQ982691    KYQ52168.1    GEDC01005217    JAS32081.1    KQ434846    KZC08250.1    NNAY01000389    OXU28727.1    GFDL01015836    JAV19209.1    GFDL01015834    JAV19211.1    DS232139    EDS35902.1    ACPB03000149    KA645414    AFP60043.1    GFTR01006198    JAW10228.1    CM000831    CH940665    ACY70490.1    EDW71128.1    GDHF01027210    JAI25104.1    GDHC01009908    JAQ08721.1    KQ976878    KYN07654.1    ADMH02001258    ETN63373.1    GBRD01011965    JAG53859.1    GDHC01009400    JAQ09229.1    JXUM01019249    KQ560537    KXJ81948.1    JXUM01080062    KQ563162    KXJ74369.1    GAKP01002293    GAKP01002290    JAC56662.1    CH477336    EAT43230.1    AXCM01001666    CH933814    EDW05599.1    AAAB01008807    EAA03946.4    APCN01000209    AXCN02000890    GBHO01031542    GBHO01006887    JAG12062.1    JAG36717.1    GDHC01011418    JAQ07211.1    ATLV01010669    KE524597    KFB35647.1    CP012527    ALC48066.1    KY030968    ATU82719.1    KQ761005    OAD58398.1    GBXI01013831    JAD00461.1    UFQT01000212    SSX21790.1   
Pfam
PF03022   MRJP
Interpro
IPR011042   6-blade_b-propeller_TolB-like        + More
IPR017996   Royal_jelly/protein_yellow       
Gene 3D
PDB
5YYL     E-value=5.31654e-42,     Score=430

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.994667
 
 
Length:
409
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.404590000000002
Exp number, first 60 AAs:
0.40038
Total prob of N-in:
0.02643
outside
1  -  409
 
 

Population Genetic Test Statistics

Pi
244.144074
Theta
166.785372
Tajima's D
2.068745
CLR
0.672959
CSRT
0.892955352232388
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 MDHEVPQIAWVITNR 95.83 1e-11
29197581 MSVDHCGIMWVIDSGQVEAFETPR 95.24 3e-08
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