SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO10311  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007257
Annotation
hypothetical_protein_KGM_03997_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 4.804
 

Sequence

CDS
ATGAAGCGTCTTCAGAAATGCTGCTGCTGTGCTTCTACTCGGACCGGGTCCCTGATCACTGCTATCCTCGGCATCATACTTTCGATAGCCACAATCATATTGATATGGACGGTCAAGAAACACACAGTCTCATTCAGCACATTTATCTTTGACAAGGAATTCGACAAGAAGCTTTCAGACTTAGACATTCCAAGGATAATATTAACAATAAATTTATGTTTCACCATCTTGATTTGCACACTTCTGATCGTCGCTATAAACAAGCGTCGGTCATGGTTGATGCTGCCGTGGGTGGTGCTGGGTATCGTTTTGGCAATCGGCTTGCTGATCAGTATCCTTCACACATCTATTACCTATTACCTCGATGAGCACGATCACGTCATAGAAGCCACCGTCATACTTGTAGGAGGAATCCTATATTTATGCTTATATCTCTACCTTTGGGCAGTTGTATTCAGCCATTACTTGGACGTGCGTGACGAAGAAGAACGTGGCCGATACCGCAAAGCTCCTTACAGAAGATAA
Protein
MKRLQKCCCCASTRTGSLITAILGIILSIATIILIWTVKKHTVSFSTFIFDKEFDKKLSDLDIPRIILTINLCFTILICTLLIVAINKRRSWLMLPWVVLGIVLAIGLLISILHTSITYYLDEHDHVIEATVILVGGILYLCLYLYLWAVVFSHYLDVRDEEERGRYRKAPYRR

Summary

Pfam
PF15860   DUF4728
Interpro
IPR031720   DUF4728        + More
IPR036259   MFS_trans_sf       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
174
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.88921
Exp number, first 60 AAs:
22.10575
Total prob of N-in:
0.99998
POSSIBLE N-term signal
sequence
inside
1  -  15
TMhelix
16  -  38
outside
39  -  63
TMhelix
64  -  86
inside
87  -  92
TMhelix
93  -  115
outside
116  -  129
TMhelix
130  -  152
inside
153  -  174
 
 

Population Genetic Test Statistics

Pi
196.175775
Theta
171.373516
Tajima's D
0.084249
CLR
0.912081
CSRT
0.3992800359982
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号