Silkworm Genome Informatics Database

Gene

KWMTBOMO10307 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007303

Annotation

PREDICTED:_protein_dimmed-like_[Amyelois_transitella]

Location

Bomo_Chr17(+):7302920-7321977 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 4.074

CDS

ATGCCACACTGGGTAACTGCTGAAGAAGGCACTGACACCGAATCTCCTGACCAAGTTATGTTATATTACGAAGATGACGCTTCAGAATACTATGATAATAAACCCGACGGCCCAGACAATATAGAAGAACAAAATGGAGATTTTTATGATAGTGGTAGCGGAAGTGATGAGCCAGTGCAGCGCAGGATGCGCCCAAGACGCGCTGTAGTATTAGGGTCTTCATCATCAGCCGGCAGTACGGGACCTCCTTCAGGACCCGGTCGACGGCGGAGGTGTGGCATTTCCGCTCGTGAACGCAACCTCCGTCGTCTCGAGAGCAATGAAAGAGAAAGAATGCGAATGCATTCCCTCAACCGAGCTTTTGAGGATTTACGCCGCGTAATCCCACATGTGAAAAAAGACAACAGAAGTCTTTCAAAGATAGAAACCCTTACCTTAGCCAAAAATTACGTGAAAGCCCTCACGAATGCTATTTGCACAATGAGAGGTGAAGTTGCTCATTATTCATTCAATAGCGACGATGAAAACGTGGAACCCGCATTTGTATTGAATAGGAGGGATCAGGAGCCGAACAACAACGAGACTGTCAGTACGGACCAGCAAGAAATTACGACACGGACGCAAGGTTTCTTCTGA

Protein

MPHWVTAEEGTDTESPDQVMLYYEDDASEYYDNKPDGPDNIEEQNGDFYDSGSGSDEPVQRRMRPRRAVVLGSSSSAGSTGPPSGPGRRRRCGISARERNLRRLESNERERMRMHSLNRAFEDLRRVIPHVKKDNRSLSKIETLTLAKNYVKALTNAICTMRGEVAHYSFNSDDENVEPAFVLNRRDQEPNNNETVSTDQQEITTRTQGFF

Uniprot

H9JCQ6 A0A2A4JEC2 A0A3G1T1A7 A0A2H1WQA8 A0A212EMJ5 A0A3S2LHX2 + More
A0A194QBE6 A0A194QS60 K7INA8

Pubmed

19121390 22118469 26354079 20075255

EMBL

BABH01034707 BABH01034708 BABH01034709 KC820643 AHJ80785.1 NWSH01001898 + More
PCG69752.1 MG846916 AXY94768.1 ODYU01010271 SOQ55260.1 AGBW02013813 OWR42708.1 RSAL01000006 RVE54198.1 KQ459232 KPJ02782.1 KQ461155 KPJ08154.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000283053 UP000053268 UP000053240 + More
UP000002358

PRIDE

H9JCQ6

Pfam

PF00010 HLH

Interpro

IPR011598 bHLH_dom + More
IPR036638 HLH_DNA-bd_sf

SUPFAM

SSF47459 SSF47459

Gene 3D

4.10.280.10

CDD

cd00083 HLH

ProteinModelPortal

H9JCQ6 A0A2A4JEC2 A0A3G1T1A7 A0A2H1WQA8 A0A212EMJ5 A0A3S2LHX2 + More
A0A194QBE6 A0A194QS60 K7INA8

PDB

2QL2 E-value=0.000117816, Score=105

KEGG

101736973 K08040 class B basic helix-loop-helix protein 8 | (RefSeq) dimm; class A basic helix-loop-helix prot

GO

GO:0046983 GO:0003676 GO:0046923 GO:0016021 GO:0015935 GO:0004812 GO:0006418 GO:0003723 GO:0046872 GO:0003824

Length:

211

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00433999999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04957

outside

1 - 211

Pi

217.052664

Theta

163.24359

Tajima's D

0.006192

CLR

1.361386

CSRT

0.36373181340933

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics