Gene

KWMTBOMO10304

Pre Gene Modal

BGIBMGA007301

Annotation

PREDICTED:_nudix_hydrolase_8-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr17(+):7273410-7278465      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.164

CDS

ATGCTTTTCATAGCCACTGAAGACAGATATAATGGCCTTACAATTGAGGACACAGAAAAATCAACAGAAATTGAATTTAACGCTAAGCTAGACTATTCCATAAATAAATGGAAATCAGAAGGCCGAAAATGTTTATGGTTTAAAATAAATATAAAAAATTCCGTTTATGTTCCATTGTTAGCACAAAAAGGTTTTAATTTTCATCATGCCAGAGATGACTTTGTGATGATGTACAAATGGTTACCTGATGACTCCGAACCAAATCTACCTCCTGCCTGTCACACAAATTTGGGTGTTGGTGCCTTAGTCTTTAACAGAAAAAACCAGATGTTGGCTATTTCAGAAAAACATTACGAATACCCACATTGGAAATTACCTGGAGGATATGTTGAGAAAGGGGAAGATATTGTAGACGCAGCGATCAGAGAAGTCAAAGAAGAAACTGGTGTAGACGTGTCATTTTTGTCTTTGATTACACTTCGACACTCGCATAATATGATGTACGGAAACTCGGACATTTACTTACTGCTCATGATGAACGCAATCTCAGATGAGATTACTCTATCTCAGAGAGAAGTCAAAGATTGTAAGTGGATGGATATTAAAGAATACACCACTCATCCTCATGTACACGAATTTAACAGGTTGATTGTGAGAAAAGCCCTCGATTACAAAACAAGAAATATAAAACTCGACATACAGAAGCGTACAGTGAAATGGTCACAGTTTGTTAGAGAAATGAATATATTATCCCTCGAGGACTATAATTACCATTGA

Protein

MLFIATEDRYNGLTIEDTEKSTEIEFNAKLDYSINKWKSEGRKCLWFKINIKNSVYVPLLAQKGFNFHHARDDFVMMYKWLPDDSEPNLPPACHTNLGVGALVFNRKNQMLAISEKHYEYPHWKLPGGYVEKGEDIVDAAIREVKEETGVDVSFLSLITLRHSHNMMYGNSDIYLLLMMNAISDEITLSQREVKDCKWMDIKEYTTHPHVHEFNRLIVRKALDYKTRNIKLDIQKRTVKWSQFVREMNILSLEDYNYH

Similarity

Belongs to the Nudix hydrolase family.

Uniprot

A0A2A4JMD5   H9JCQ4   A0A3S2P0X8   A0A2H1WQU9   A0A194QH61   A0A194QT27   + More
A0A212EMJ0   A0A2H1WQU5   H9JCL6   A0A194QCS1   A0A2A4JMV9   A0A212FA52   A0A194QX54   D6WX88   A0A1W4WIP4   A0A1W4WUU4   A0A1W4WTJ0   A0A0T6AX11   S4P8F4   A0A2J7PKN1   A0A067R6N0   N6U4S0   U4UAU5   A0A2J7PKL9   A0A182RB96   A0A1J1I3V7   A0A182P406   A0A023ENS3   A0A182M9X4   A0A2M3Z6F6   A0A182SS98   A0A2M3Z695   A0A2M3Z627   A0A2M3Z5Y8   A0A3R7MJ34   A0A182H9K5   A0A182YG36   A0A182W106   A0A182ND52   A0A336K395   T1DR80   U5EQK4   A0A2M4BTW3   A0A2M4BTC5   A0A2M4BT52   A0A2M4BU94   A0A2M4BTQ9   Q5TXG6   A0A182K935   A0A182FR47   Q7PCV5   A0A1B6D1X3   A0A0K8TS26   A0A182IXE1   A0A182KXT1   A0A182WVK0   A0A182VPA4   A0A1I8NRX4   A0A182PZY3   A0A182I978   A0A3B0JXU8   A0A1B6DQD8   A0A3B0K549   A0A2M4CY36   A0A2M4AHF5   A0A2M4AHG0   A0A2M4AHK1   A0A2M4AHG8   A0A0N7ZCB0   A0A2M4CXQ8   B4L6Z7   A0A0P4WE55   A0A2M4DNH9   A0A1W4VG81   A0A1I8M130   A0A2M4DNE9   A0A084VKD9   A0A1I8M126   A0A1Y1LWE6   A0A1Q3FK33   A0A0L0C132   B4PWR0   B4GWB4   W5JEE7   B3NTI0   A0A0A1X000   A0A1Y1LTU0   A0A034VJZ0   E9IQ80   B5DLL2   B0X9R2   K7J5N1   A0A154PPV7   B4R5F9   A0A0J7JZN3   B4IKA4   B3MZ15   B4NQ41   A0A034VLK8  

Pubmed

19121390    26354079    22118469    18362917    19820115    23622113    + More
24845553    23537049    24945155    26483478    25244985    9087549    12364791    14747013    17210077    26369729    20966253    17994087    18057021    25315136    24438588    28004739    26108605    17550304    20920257    23761445    25830018    25348373    21282665    15632085    23185243    20075255   

EMBL

NWSH01001074    PCG72744.1    BABH01034706    RSAL01000006    RVE54196.1    ODYU01010378    + More
SOQ55450.1    KQ459232    KPJ02781.1    KQ461155    KPJ08155.1    AGBW02013813    OWR42705.1    SOQ55451.1    BABH01034705    KPJ02780.1    PCG72742.1    PCG72743.1    AGBW02009515    OWR50616.1    KPJ08156.1    KQ971361    EFA08806.2    LJIG01022605    KRT79676.1    GAIX01005961    JAA86599.1    NEVH01024535    PNF16885.1    KK852663    KDR19066.1    APGK01040155    APGK01040156    KB740975    ENN76585.1    KB632267    ERL91034.1    PNF16883.1    CVRI01000040    CRK94992.1    GAPW01003007    JAC10591.1    AXCM01000042    GGFM01003361    MBW24112.1    GGFM01003279    MBW24030.1    GGFM01003147    MBW23898.1    GGFM01003107    MBW23858.1    QCYY01000609    ROT84025.1    JXUM01121026    JXUM01121027    KQ566454    KXJ70125.1    UFQS01000042    UFQT01000042    SSW98332.1    SSX18718.1    GAMD01000760    JAB00831.1    GANO01004202    JAB55669.1    GGFJ01007301    MBW56442.1    GGFJ01007186    MBW56327.1    GGFJ01007114    MBW56255.1    GGFJ01007187    MBW56328.1    GGFJ01007190    MBW56331.1    AAAB01008592    EAA03450.5    AAAB01008200    EAA03301.4    GEDC01017652    JAS19646.1    GDAI01000650    JAI16953.1    AXCN02001602    APCN01003217    OUUW01000003    SPP78589.1    GEDC01009394    JAS27904.1    SPP78588.1    GGFL01006068    MBW70246.1    GGFK01006889    MBW40210.1    GGFK01006902    MBW40223.1    GGFK01006948    MBW40269.1    GGFK01006915    MBW40236.1    GDRN01070068    JAI63944.1    GGFL01005938    MBW70116.1    CH933812    EDW06143.2    KRG07162.1    GDRN01070067    JAI63945.1    GGFL01014903    MBW79081.1    GGFL01014904    MBW79082.1    ATLV01014180    KE524947    KFB38433.1    GEZM01050849    JAV75347.1    GFDL01007147    JAV27898.1    JRES01001143    KNC25169.1    CM000162    EDX01806.1    CH479194    EDW26998.1    ADMH02001628    ETN61723.1    CH954180    EDV46984.1    GBXI01009653    JAD04639.1    GEZM01050859    JAV75335.1    GAKP01016515    JAC42437.1    GL764666    EFZ17267.1    CH379063    EDY72414.1    KRT06283.1    DS232546    EDS43264.1    KQ435022    KZC13923.1    CM000366    EDX18004.1    LBMM01019544    KMQ83514.1    CH480852    EDW51496.1    CH902632    EDV32859.1    CH964291    EDW86266.1    GAKP01016514    JAC42438.1   

Proteomes

UP000218220    UP000005204    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000007266    UP000192223    UP000235965    UP000027135    UP000019118    UP000030742    UP000075900    UP000183832    UP000075885    UP000075883    UP000075901    UP000283509    UP000069940    UP000249989    UP000076408    UP000075920    UP000075884    UP000007062    UP000075881    UP000069272    UP000075880    UP000075882    UP000076407    UP000075903    UP000095300    UP000075886    UP000075840    UP000268350    UP000009192    UP000192221    UP000095301    UP000030765    UP000037069    UP000002282    UP000008744    UP000000673    UP000008711    UP000001819    UP000002320    UP000002358    UP000076502    UP000000304    UP000036403    UP000001292    UP000007801    UP000007798   

PRIDE

H9JCQ4    H9JCL6   

Pfam

PF18290   Nudix_hydro        + More
PF00293   NUDIX

Interpro

IPR020476   Nudix_hydrolase        + More
IPR040618   Pre-Nudix       
IPR020084   NUDIX_hydrolase_CS       
IPR000086   NUDIX_hydrolase_dom       
IPR003293   Nudix_hydrolase6-like       
IPR015797   NUDIX_hydrolase-like_dom_sf       

SUPFAM

SSF55811   SSF55811       

ProteinModelPortal

A0A2A4JMD5   H9JCQ4   A0A3S2P0X8   A0A2H1WQU9   A0A194QH61   A0A194QT27   + More
A0A212EMJ0   A0A2H1WQU5   H9JCL6   A0A194QCS1   A0A2A4JMV9   A0A212FA52   A0A194QX54   D6WX88   A0A1W4WIP4   A0A1W4WUU4   A0A1W4WTJ0   A0A0T6AX11   S4P8F4   A0A2J7PKN1   A0A067R6N0   N6U4S0   U4UAU5   A0A2J7PKL9   A0A182RB96   A0A1J1I3V7   A0A182P406   A0A023ENS3   A0A182M9X4   A0A2M3Z6F6   A0A182SS98   A0A2M3Z695   A0A2M3Z627   A0A2M3Z5Y8   A0A3R7MJ34   A0A182H9K5   A0A182YG36   A0A182W106   A0A182ND52   A0A336K395   T1DR80   U5EQK4   A0A2M4BTW3   A0A2M4BTC5   A0A2M4BT52   A0A2M4BU94   A0A2M4BTQ9   Q5TXG6   A0A182K935   A0A182FR47   Q7PCV5   A0A1B6D1X3   A0A0K8TS26   A0A182IXE1   A0A182KXT1   A0A182WVK0   A0A182VPA4   A0A1I8NRX4   A0A182PZY3   A0A182I978   A0A3B0JXU8   A0A1B6DQD8   A0A3B0K549   A0A2M4CY36   A0A2M4AHF5   A0A2M4AHG0   A0A2M4AHK1   A0A2M4AHG8   A0A0N7ZCB0   A0A2M4CXQ8   B4L6Z7   A0A0P4WE55   A0A2M4DNH9   A0A1W4VG81   A0A1I8M130   A0A2M4DNE9   A0A084VKD9   A0A1I8M126   A0A1Y1LWE6   A0A1Q3FK33   A0A0L0C132   B4PWR0   B4GWB4   W5JEE7   B3NTI0   A0A0A1X000   A0A1Y1LTU0   A0A034VJZ0   E9IQ80   B5DLL2   B0X9R2   K7J5N1   A0A154PPV7   B4R5F9   A0A0J7JZN3   B4IKA4   B3MZ15   B4NQ41   A0A034VLK8  

PDB

4ZBP     E-value=4.07077e-28,     Score=308

KEGG

101736710    no KO assigned | (RefSeq) nudix hydrolase 8-like

GO

GO:0016787   GO:0016021   GO:0035529   GO:0051287   GO:0047631   GO:0003676   GO:0046923   GO:0015935   GO:0004812   GO:0006418   GO:0003723   GO:0046872   GO:0003824  

Length:

258

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02181

Exp number, first 60 AAs:

0.00853

Total prob of N-in:

0.04159

outside

1  -  258

 

 

Pi

202.345502

Theta

52.683052

Tajima's D

0.136808

CLR

0.654788

CSRT

0.401029948502575

Interpretation

Uncertain