Silkworm Genome Informatics Database

Gene

KWMTBOMO10302

Pre Gene Modal

BGIBMGA007300

Annotation

PREDICTED:_uncharacterized_protein_LOC105841590_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr17(+):7263560-7269062 View in EpiBrowser

Transcription factor

HTH

Location in the cell

Nuclear Reliability : 3.514

CDS

ATGTTCCACCCCGTCCGCAGTGGCCGCCAATGGCTCCAACAAGTCGGACGTGTACTACGCGTACTTAGAGAAAACAAGATGCCACGTAAATACTCACGAACCTCTTCGCGGGCCACTTCTTATACAAAAGAAGCGCTGAAATTAGCCATGCAGAAAATAAATAATAAGGAGCTCACCTATGCAGCCGCTTCAAAAATGTACGGCATACCTACATCCACACTTAGTGATAGAATCCTAAAGAAAACAGCAATAGTAAGTAACACCCTTGGTAGGCCGACAGCTATCCCAGTGGCTTTAGAAGCTAAGCTGGCAAACTGCCTACGAACACTGGAAAAGTGGGGGTGGGGCTTATCAAGAGAAGAGGTACTTGATGTAACACAGGATTTTATAAAAAGAAATAAAATACAAACCCCCTTTAAGAATGACAGACCGGGATCAGACTGGTTTATATCTTTTCGACAGCGCCACAATTTGTCAATAAAAAAGCCGCAACCTGTTGAATACCTAAGAAAAAAAATGACTGATCCATTTATCATTAATGAGTATTTTACTCTTCTCGAAAAGACACTCCACGAATTAAATCTTTCAGATCCCAAGCGAATCTGGAATCTCGATGAAACATCTGTTTGTCTCGATCCCACAAAAACGAAAGTTGTAGGTGCCACAGGGGAGCCTTGTACACGAACAACATGTGGAAGCGCTAAAGAAAATATTACAGTGTTGACTACTGTAAATGCAGCGGGACAAAAATTGGACCCCCTGATCGTATTTAAGGGCAAACACATGTACGAACAATGGATGTTAGAGAATCCCGAAAAATACGATTTCGATCTTGCGTATGCAGCCAGCAAACGAGGCTGGATGGAAACAAATATTTTTTATGATTACATGTTAAAAGTAATTATACCTAATTTGGGTAAAGCCAGGCCCGTATTATTGCTGTATGATGGACATGTCAGTCATGTCGATGACAAAGTGGTAGCTTTAGCAGTGGAAAACAACATCACCATATTAAAGCTTCCTGCACATACATCACATTTATTGCAACCGCTAGACTTGGCTGTGTTCAAATCTTTTAAAACAATTTGGGATAAAAACCTTGTAAAATGGCAACGACAAAACGTTGGAATCAAATTAAGAAAACAAAGTTTTGCTAAAATGTTTGCTGAAGCGTGGCAGGAAACAAAACCACAAGTAATCCGAAATGGCTTTAAAAAAGGTGGTATTTACCCTTTTAATCCTGCGGTTATACCAAAGCACAAGTATGATCCAGCAGCTTATTCGAGATGGCAAAAACACATGGTTTCAGTGACTTTACAAGTGAAATCTTTAAAACAGATATGTGTTGATAAAATAAATAAGATCATATGGTATGACAGCTCTACTTCTATACCAAACAATAACCTTATTTACACTGAAATTTTGGACTCACCGAACACTTTAAAACCTAGAGACAGCCTGCCGCAACCACTTGCCACTTTCGAAGAATTACTTCTAGAAAAAGTTTCCCAACATCCTCAGAACACTAAAAACAATATAGCTGTTAAGTTAAAAAGGATCGCGAAAGGTGCAGAAGTAATTACAAAAACTTTTTTAGAAAAACAGCAAGCGATAGAAGTACCAGAGAAAAAAGCAGTAAAAAAGACAACAAAACGGAAGCAAAAAACAGTATCTCAATCTCAAAATTATACAATTGATCCTATACCAGGACCATCTGGAATTCAAAATCAAAATTTAAAAATAGAAAAAACCATAACGAATGTATCGATTTTGACTAATAAGAACAGCACTGACGTGTCTTCTCAAGAAGGCAAACAAGTAGGAAAAAAAACTCGAGCAAGCAAAGAAAATTATTTGAAAGTAAACAAGTATCCTGAACAAAGCAAAACAAGTGTTTTACGTAAACTGGAAAATAAATCTGCCCAAAAGAGAACTACAAACACACCCACAAAAAAGCGTAAAAGGGCTAACAGCAGTGCTACGACAATTGAAAGCGTTCAGATGAGCCTATATAGTGATTCCGATTTATTAGAACCTTTGAGCGATATAATATTATCTGACTGTGATAAATGGACTGACTTTAATTATTATGAGGAAAACAAGACTGACTTAGAATTCGCGTCTAGAGAACAGCAAATTGAAAGAATTGTCAAAGAAATACACGGCATTGATAATCAAGAGAGAAATGCATGTCAAAGAGACCACGATACTTTGATGAGACCGGACGAGAGTTGTGAGATAGAAGAATTTCCAGAATTTGATACCAAAGAAACAAACGTTCAGGCGAATGATAATAATAAAGTGACTATTTTATCGTCCGTAAAAATGACACCAGGTAACCAAGCTTTCTACAACATTTTACCTGAAAGTTTACAACTAAATCCAATTGACAAAGATTTAGATTTGTTTACAAACCAAAAGCGAAAATTGTCACAAAGTACAAGCGTATCGAATATACCAAAGAAAAAAATAAAGAGACTTAATTTTCCTACAAAAACAACGACAATTAAAGATCAAAAGGATTTCAGTGGAAACTTGTATATCAACATTGATAAGGATGATGACAGTGCTACCAAAAATGATATTGCTGATTCGAAGACATACAACATAGGAGATACAGTACTTGTTAGATATTTCAAAAGAAGTTGGACATATTACGTCGGTATCATTGAAAATAATAATAGCAATTCACACCCAAAAATTTACAACATTACATTCTATAGGACTATTGGCAAGAAAAACAACCTGAGATTTGTTATTCCTAAGCGTAAAGACCAAGACTACGTACCTGATTCTAATATAGTTAAAGTGATAGAATTACTACAGATAAATGAGGATCCTATTGAGTATACTCTCATGAATGACTATGATGAGAATTTCTTTTAA

Protein

MFHPVRSGRQWLQQVGRVLRVLRENKMPRKYSRTSSRATSYTKEALKLAMQKINNKELTYAAASKMYGIPTSTLSDRILKKTAIVSNTLGRPTAIPVALEAKLANCLRTLEKWGWGLSREEVLDVTQDFIKRNKIQTPFKNDRPGSDWFISFRQRHNLSIKKPQPVEYLRKKMTDPFIINEYFTLLEKTLHELNLSDPKRIWNLDETSVCLDPTKTKVVGATGEPCTRTTCGSAKENITVLTTVNAAGQKLDPLIVFKGKHMYEQWMLENPEKYDFDLAYAASKRGWMETNIFYDYMLKVIIPNLGKARPVLLLYDGHVSHVDDKVVALAVENNITILKLPAHTSHLLQPLDLAVFKSFKTIWDKNLVKWQRQNVGIKLRKQSFAKMFAEAWQETKPQVIRNGFKKGGIYPFNPAVIPKHKYDPAAYSRWQKHMVSVTLQVKSLKQICVDKINKIIWYDSSTSIPNNNLIYTEILDSPNTLKPRDSLPQPLATFEELLLEKVSQHPQNTKNNIAVKLKRIAKGAEVITKTFLEKQQAIEVPEKKAVKKTTKRKQKTVSQSQNYTIDPIPGPSGIQNQNLKIEKTITNVSILTNKNSTDVSSQEGKQVGKKTRASKENYLKVNKYPEQSKTSVLRKLENKSAQKRTTNTPTKKRKRANSSATTIESVQMSLYSDSDLLEPLSDIILSDCDKWTDFNYYEENKTDLEFASREQQIERIVKEIHGIDNQERNACQRDHDTLMRPDESCEIEEFPEFDTKETNVQANDNNKVTILSSVKMTPGNQAFYNILPESLQLNPIDKDLDLFTNQKRKLSQSTSVSNIPKKKIKRLNFPTKTTTIKDQKDFSGNLYINIDKDDDSATKNDIADSKTYNIGDTVLVRYFKRSWTYYVGIIENNNSNSHPKIYNITFYRTIGKKNNLRFVIPKRKDQDYVPDSNIVKVIELLQINEDPIEYTLMNDYDENFF

Uniprot

A0A2A4K184

EMBL

NWSH01000297 PCG77654.1

Proteomes

UP000218220

Pfam

PF03184 DDE_1 + More
PF05225 HTH_psq

Interpro

IPR009057   Homeobox-like_sf        + More
IPR007889   HTH_Psq
IPR004875   DDE_SF_endonuclease_dom

SUPFAM

SSF46689 SSF46689

ProteinModelPortal

A0A2A4K184

KEGG

105841590 no KO assigned | (RefSeq) uncharacterized LOC105841590

GO

GO:0005634 GO:0003677 GO:0003676 GO:0046923 GO:0016021 GO:0015935 GO:0004812 GO:0006418 GO:0003723 GO:0046872 GO:0003824

Subcellular location

Nucleus

Length:

961

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00281

Exp number, first 60 AAs:

0.0004

Total prob of N-in:

0.00016

outside

1 - 961

Pi

264.890167

Theta

188.964177

Tajima's D

1.545009

CLR

0.005528

CSRT

0.799110044497775

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics